RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W YLR455WQ06188 304 aa3.02□□□□□ -1.93
SSF1YHR066W SNF1P06782 633 aaKnown RBP3.01□□□□□ -1.93
SSF1YHR066W PET111P08468 800 aa3.01□□□□□ -1.93
SSF1YHR066W MRP2P10663 115 aaPredicted RBP3.01□□□□□ -1.93
SSF1YHR066W MRS6P32864 603 aaKnown RBP3.01□□□□□ -1.93
SSF1YHR066W NTR2P36118 322 aaPredicted RBP3.01□□□□□ -1.93
SSF1YHR066W MDV1P47025 714 aa3.01□□□□□ -1.93
SSF1YHR066W YNL144CP53907 740 aa3.01□□□□□ -1.93
SSF1YHR066W GTR1Q00582 310 aa3.01□□□□□ -1.93
SSF1YHR066W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
SSF1YHR066W VCX1Q99385 411 aa3.01□□□□□ -1.93
SSF1YHR066W PWP2P25635 923 aaKnown RBP3□□□□□ -1.93
SSF1YHR066W RAD16P31244 790 aa3□□□□□ -1.93
SSF1YHR066W SRB5P32585 307 aa3□□□□□ -1.93
SSF1YHR066W AAP1P37898 856 aaKnown RBP3□□□□□ -1.93
SSF1YHR066W SCO2P38072 301 aa3□□□□□ -1.93
SSF1YHR066W PSY4P38193 441 aa3□□□□□ -1.93
SSF1YHR066W IST3P40565 148 aaPredicted RBP3□□□□□ -1.93
SSF1YHR066W YGR021WP53212 290 aa3□□□□□ -1.93
SSF1YHR066W ASI1P54074 624 aa3□□□□□ -1.93
SSF1YHR066W REG1Q00816 1014 aa3□□□□□ -1.93
SSF1YHR066W VID22Q05934 901 aa3□□□□□ -1.93
SSF1YHR066W PSR2Q07949 397 aa3□□□□□ -1.93
SSF1YHR066W YLR112WQ12130 139 aa3□□□□□ -1.93
SSF1YHR066W SSM4P40318 1319 aa3□□□□□ -1.93
SSF1YHR066W RPL42AP0CX27 106 aaKnown RBP3□□□□□ -1.93
SSF1YHR066W RPL42BP0CX28 106 aaKnown RBP3□□□□□ -1.93
SSF1YHR066W ERG8P24521 451 aa3□□□□□ -1.93
SSF1YHR066W STE50P25344 346 aa3□□□□□ -1.93
SSF1YHR066W YIL152WP40455 235 aa3□□□□□ -1.93
SSF1YHR066W YIR016WP40572 265 aa3□□□□□ -1.93
SSF1YHR066W UBP8P50102 471 aa3□□□□□ -1.93
SSF1YHR066W CAC2Q04199 468 aa3□□□□□ -1.93
SSF1YHR066W SWF1Q04629 336 aa3□□□□□ -1.93
SSF1YHR066W GSH2Q08220 491 aa3□□□□□ -1.93
SSF1YHR066W GUK1P15454 187 aaKnown RBP2.99□□□□□ -1.93
SSF1YHR066W ATO2P32907 282 aa2.99□□□□□ -1.93
SSF1YHR066W TFC3P34111 1160 aa2.99□□□□□ -1.93
SSF1YHR066W TEF4P36008 412 aaKnown RBP2.99□□□□□ -1.93
SSF1YHR066W LHS1P36016 881 aa2.99□□□□□ -1.93
SSF1YHR066W SEC31P38968 1273 aaKnown RBP2.99□□□□□ -1.93
SSF1YHR066W PFK26P40433 827 aaKnown RBP2.99□□□□□ -1.93
SSF1YHR066W CTK2P46962 323 aa2.99□□□□□ -1.93
SSF1YHR066W RSM28Q03430 361 aa2.99□□□□□ -1.93
SSF1YHR066W VMS1Q04311 632 aaKnown RBP2.99□□□□□ -1.93
SSF1YHR066W PSK2Q08217 1101 aa2.99□□□□□ -1.93
SSF1YHR066W GPN2Q08726 347 aaPredicted RBP2.99□□□□□ -1.93
SSF1YHR066W YLR049CQ12110 428 aa2.99□□□□□ -1.93
SSF1YHR066W UBX3Q12229 455 aa2.99□□□□□ -1.93
SSF1YHR066W YOR019WQ99248 730 aa2.99□□□□□ -1.93
SSF1YHR066W YFL068WP0CX99 160 aa2.98□□□□□ -1.93
SSF1YHR066W YLL066W-AP0CY00 160 aa2.98□□□□□ -1.93
SSF1YHR066W YLL067W-AP0CY01 160 aa2.98□□□□□ -1.93
SSF1YHR066W PFK2P16862 959 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SSF1YHR066W TKL1P23254 680 aaKnown RBP2.98□□□□□ -1.93
SSF1YHR066W SOF1P33750 489 aaKnown RBP2.98□□□□□ -1.93
SSF1YHR066W LEU5P38702 357 aa2.98□□□□□ -1.93
SSF1YHR066W AXL2P38928 823 aa2.98□□□□□ -1.93
SSF1YHR066W UME6P39001 836 aa2.98□□□□□ -1.93
SSF1YHR066W ECM10P39987 644 aa2.98□□□□□ -1.93
SSF1YHR066W MRX1P40050 688 aa2.98□□□□□ -1.93
SSF1YHR066W YFR020WP43600 232 aa2.98□□□□□ -1.93
SSF1YHR066W VPS25P47142 202 aa2.98□□□□□ -1.93
SSF1YHR066W VPS4P52917 437 aa2.98□□□□□ -1.93
SSF1YHR066W FCP1Q03254 732 aa2.98□□□□□ -1.93
SSF1YHR066W PFA5Q03289 374 aa2.98□□□□□ -1.93
SSF1YHR066W POS5Q06892 414 aa2.98□□□□□ -1.93
SSF1YHR066W SNA4Q07549 140 aa2.98□□□□□ -1.93
SSF1YHR066W MLH2Q07980 695 aa2.98□□□□□ -1.93
SSF1YHR066W SRL1Q08673 210 aa2.98□□□□□ -1.93
SSF1YHR066W ERG27Q12452 347 aaKnown RBP2.98□□□□□ -1.93
SSF1YHR066W RPB2P08518 1224 aaKnown RBP2.97□□□□□ -1.93
SSF1YHR066W YCR043CP25361 127 aa2.97□□□□□ -1.93
SSF1YHR066W YUR1P26725 428 aa2.97□□□□□ -1.93
SSF1YHR066W CNS1P33313 385 aa2.97□□□□□ -1.93
SSF1YHR066W YER010CP40011 234 aa2.97□□□□□ -1.93
SSF1YHR066W FMP10P40098 244 aa2.97□□□□□ -1.93
SSF1YHR066W RIC1P40395 1056 aa2.97□□□□□ -1.93
SSF1YHR066W RPN11P43588 306 aaKnown RBP2.97□□□□□ -1.93
SSF1YHR066W BOP3P53958 396 aa2.97□□□□□ -1.93
SSF1YHR066W YML131WQ03102 365 aa2.97□□□□□ -1.93
SSF1YHR066W IZH1Q03419 316 aa2.97□□□□□ -1.93
SSF1YHR066W TDA9Q04545 1251 aa2.97□□□□□ -1.93
SSF1YHR066W SNO4Q04902 237 aa2.97□□□□□ -1.93
SSF1YHR066W YMR034CQ05131 434 aaPredicted RBP2.97□□□□□ -1.93
SSF1YHR066W YOL159CQ08300 171 aa2.97□□□□□ -1.93
SSF1YHR066W HSP33Q08914 237 aaKnown RBP2.97□□□□□ -1.93
SSF1YHR066W HSP32Q08992 237 aa2.97□□□□□ -1.93
SSF1YHR066W YOL087CQ99247 1116 aa2.97□□□□□ -1.93
SSF1YHR066W YLR302CO13544 120 aa2.96□□□□□ -1.94
SSF1YHR066W TOP1P04786 769 aa2.96□□□□□ -1.94
SSF1YHR066W TRX2P22803 104 aaKnown RBP2.96□□□□□ -1.94
SSF1YHR066W MRP20P32387 263 aa2.96□□□□□ -1.94
SSF1YHR066W SLC1P33333 303 aa2.96□□□□□ -1.94
SSF1YHR066W ARC40P38328 384 aaKnown RBP2.96□□□□□ -1.94
SSF1YHR066W HXT9P40885 567 aa2.96□□□□□ -1.94
SSF1YHR066W IML2P47031 731 aa2.96□□□□□ -1.94
SSF1YHR066W YTP1P53584 459 aa2.96□□□□□ -1.94
SSF1YHR066W MAK10Q02197 733 aa2.96□□□□□ -1.94
SSF1YHR066W ARP9Q05123 467 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms