RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	ASN1	P49089	572 aa	Known RBP	5.39	□□□□□ -1.55
SKI8	YGL213C	YGL117W	P53133	265 aa		5.39	□□□□□ -1.55
SKI8	YGL213C	YML037C	Q03703	340 aa		5.39	□□□□□ -1.55
SKI8	YGL213C	RAD33	Q04231	177 aa		5.39	□□□□□ -1.55
SKI8	YGL213C	GPN2	Q08726	347 aa	Predicted RBP	5.39	□□□□□ -1.55
SKI8	YGL213C	PCL8	Q08966	492 aa		5.39	□□□□□ -1.55
SKI8	YGL213C	ILV2	P07342	687 aa	Known RBP	5.38	□□□□□ -1.55
SKI8	YGL213C	VMA16	P23968	213 aa		5.38	□□□□□ -1.55
SKI8	YGL213C	YSP3	P25036	478 aa		5.38	□□□□□ -1.55
SKI8	YGL213C	LCB1	P25045	558 aa	Known RBP	5.38	□□□□□ -1.55
SKI8	YGL213C	BLI1	P35727	113 aa		5.38	□□□□□ -1.55
SKI8	YGL213C	YKL050C	P35736	922 aa		5.38	□□□□□ -1.55
SKI8	YGL213C	NTR2	P36118	322 aa	Predicted RBP	5.38	□□□□□ -1.55
SKI8	YGL213C	RGI2	P40188	164 aa		5.38	□□□□□ -1.55
SKI8	YGL213C	SWP82	P43554	623 aa		5.38	□□□□□ -1.55
SKI8	YGL213C	YMR155W	Q03795	547 aa		5.38	□□□□□ -1.55
SKI8	YGL213C	BUD22	Q04347	519 aa	Known RBP	5.38	□□□□□ -1.55
SKI8	YGL213C	ROX1	P25042	368 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	ERG3	P32353	365 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	VMA8	P32610	256 aa	Known RBP	5.37	□□□□□ -1.55
SKI8	YGL213C	SOF1	P33750	489 aa	Known RBP	5.37	□□□□□ -1.55
SKI8	YGL213C	KES1	P35844	434 aa	Known RBP	5.37	□□□□□ -1.55
SKI8	YGL213C	LHS1	P36016	881 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	SRO77	P38163	1010 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	MUP3	P38734	546 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	MRX1	P40050	688 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	BUR6	P40096	142 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	SDS3	P40505	327 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	OPT1	P40897	799 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	YFL015C	P43578	164 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	LYS4	P49367	693 aa	Predicted RBP	5.37	□□□□□ -1.55
SKI8	YGL213C	RSC1	P53236	928 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	ARG7	Q04728	441 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	YEH1	Q07804	573 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	PUS9	Q12069	462 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	GET3	Q12154	354 aa	Known RBP	5.37	□□□□□ -1.55
SKI8	YGL213C	RTN2	Q12443	393 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	Q0010	Q9ZZX9	128 aa		5.37	□□□□□ -1.55
SKI8	YGL213C	RPL7A	P05737	244 aa	Known RBP	5.36	□□□□□ -1.55
SKI8	YGL213C	HOM3	P10869	527 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	DBF4	P32325	704 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	PDB1	P32473	366 aa	Known RBP	5.36	□□□□□ -1.55
SKI8	YGL213C	AAP1	P37898	856 aa	Known RBP	5.36	□□□□□ -1.55
SKI8	YGL213C	UBP13	P38187	747 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	RKM3	P38222	552 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	SEC31	P38968	1273 aa	Known RBP	5.36	□□□□□ -1.55
SKI8	YGL213C	ASG1	P40467	964 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	YGR066C	P53242	292 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	INA17	Q02888	182 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	RSM28	Q03430	361 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	HRD3	Q05787	833 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	GRC3	Q07845	632 aa		5.36	□□□□□ -1.55
SKI8	YGL213C	RPL7B	Q12213	244 aa	Known RBP	5.36	□□□□□ -1.55
SKI8	YGL213C	SNU66	Q12420	587 aa	Predicted RBP	5.36	□□□□□ -1.55
SKI8	YGL213C	HXK2	P04807	486 aa	Known RBP	5.35	□□□□□ -1.55
SKI8	YGL213C	SES1	P07284	462 aa	Known RBP	5.35	□□□□□ -1.55
SKI8	YGL213C	YIH1	P25637	258 aa		5.35	□□□□□ -1.55
SKI8	YGL213C	ORC2	P32833	620 aa		5.35	□□□□□ -1.55
SKI8	YGL213C	PEX5	P35056	612 aa		5.35	□□□□□ -1.55
SKI8	YGL213C	MUM2	P38236	366 aa		5.35	□□□□□ -1.55
SKI8	YGL213C	YNG2	P38806	282 aa	Known RBP	5.35	□□□□□ -1.55
SKI8	YGL213C	DOT5	P40553	215 aa		5.35	□□□□□ -1.55
SKI8	YGL213C	IRC24	P40580	263 aa		5.35	□□□□□ -1.55
SKI8	YGL213C	STR3	P53101	465 aa	Known RBP	5.35	□□□□□ -1.55
SKI8	YGL213C	SPE4	Q12455	300 aa		5.35	□□□□□ -1.55
SKI8	YGL213C	YJR112W-A	Q3E743	109 aa		5.35	□□□□□ -1.55
SKI8	YGL213C	YMR084W	A2P2R3	262 aa		5.34	□□□□□ -1.55
SKI8	YGL213C	SRP54	P20424	541 aa	Known RBP	5.34	□□□□□ -1.55
SKI8	YGL213C	PTC6	P25646	442 aa		5.34	□□□□□ -1.55
SKI8	YGL213C	SRP72	P38688	640 aa	Known RBP	5.34	□□□□□ -1.55
SKI8	YGL213C	CHS7	P38843	316 aa		5.34	□□□□□ -1.55
SKI8	YGL213C	AXL1	P40851	1208 aa		5.34	□□□□□ -1.55
SKI8	YGL213C	RPS7B	P48164	190 aa	Known RBP	5.34	□□□□□ -1.55
SKI8	YGL213C	RIM20	Q12033	661 aa		5.34	□□□□□ -1.55
SKI8	YGL213C	MRH1	Q12117	320 aa	Predicted RBP	5.34	□□□□□ -1.55
SKI8	YGL213C	PGA3	Q12746	312 aa	Known RBP	5.34	□□□□□ -1.55
SKI8	YGL213C	YPT6	Q99260	215 aa		5.34	□□□□□ -1.55
SKI8	YGL213C	SEC3	P33332	1336 aa	Known RBP	5.33	□□□□□ -1.56
SKI8	YGL213C	RTC1	Q08281	1341 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	ARD1	P07347	238 aa	Predicted RBP	5.33	□□□□□ -1.56
SKI8	YGL213C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.33	□□□□□ -1.56	not detected
SKI8	YGL213C	HEM1	P09950	548 aa	Predicted RBP	5.33	□□□□□ -1.56
SKI8	YGL213C	PCT1	P13259	424 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	PMA2	P19657	947 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	PWP1	P21304	576 aa	Known RBP	5.33	□□□□□ -1.56
SKI8	YGL213C	RPC53	P25441	422 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	UBP11	P36026	717 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	YEL057C	P39983	233 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	GND2	P53319	492 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	IST1	P53843	298 aa	Predicted RBP	5.33	□□□□□ -1.56
SKI8	YGL213C	YLR352W	Q06479	807 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	BUD7	Q08754	746 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	LEA1	Q08963	238 aa	Predicted RBP	5.33	□□□□□ -1.56
SKI8	YGL213C	SMC6	Q12749	1114 aa		5.33	□□□□□ -1.56
SKI8	YGL213C	PDX1	P16451	410 aa		5.32	□□□□□ -1.56
SKI8	YGL213C	EST1	P17214	699 aa	Predicted RBP	5.32	□□□□□ -1.56
SKI8	YGL213C	SAT4	P25333	603 aa	Known RBP	5.32	□□□□□ -1.56
SKI8	YGL213C	UGP1	P32861	499 aa	Known RBP	5.32	□□□□□ -1.56
SKI8	YGL213C	ADE17	P38009	592 aa	Known RBP	5.32	□□□□□ -1.56
SKI8	YGL213C	ECM10	P39987	644 aa		5.32	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 57 ms