RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	AAR2	P32357	355 aa	Predicted RBP	4.19	□□□□□ -1.74
TPA1	YER049W	SEC66	P33754	206 aa		4.19	□□□□□ -1.74
TPA1	YER049W	ERP2	P39704	215 aa		4.19	□□□□□ -1.74
TPA1	YER049W	GDH3	P39708	457 aa		4.19	□□□□□ -1.74
TPA1	YER049W	SSP120	P39931	234 aa	Known RBP	4.19	□□□□□ -1.74
TPA1	YER049W	PEP8	P40335	379 aa		4.19	□□□□□ -1.74
TPA1	YER049W	AIM20	P40451	204 aa		4.19	□□□□□ -1.74
TPA1	YER049W	CHS6	P40955	746 aa		4.19	□□□□□ -1.74
TPA1	YER049W	FAR3	P46671	204 aa		4.19	□□□□□ -1.74
TPA1	YER049W	VMA10	P48836	114 aa	Known RBP	4.19	□□□□□ -1.74
TPA1	YER049W	ORC5	P50874	479 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YGL108C	P53139	140 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YTP1	P53584	459 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YNL247W	P53852	767 aa	Known RBP	4.19	□□□□□ -1.74
TPA1	YER049W	KIN4	Q01919	800 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YML037C	Q03703	340 aa		4.19	□□□□□ -1.74
TPA1	YER049W	COQ9	Q05779	260 aa		4.19	□□□□□ -1.74
TPA1	YER049W	GIC2	Q06648	383 aa		4.19	□□□□□ -1.74
TPA1	YER049W	SMC5	Q08204	1093 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YOR059C	Q08448	450 aa	Known RBP	4.19	□□□□□ -1.74
TPA1	YER049W	MET7	Q08645	548 aa		4.19	□□□□□ -1.74
TPA1	YER049W	CIR2	Q08822	631 aa		4.19	□□□□□ -1.74
TPA1	YER049W	VIK1	Q12045	647 aa		4.19	□□□□□ -1.74
TPA1	YER049W	MSH5	Q12175	901 aa		4.19	□□□□□ -1.74
TPA1	YER049W	HRT3	Q12347	344 aa		4.19	□□□□□ -1.74
TPA1	YER049W	RPS9B	P05755	195 aa	Known RBP	4.19	□□□□□ -1.74
TPA1	YER049W	ATR1	P13090	542 aa		4.19	□□□□□ -1.74
TPA1	YER049W	SEC63	P14906	663 aa		4.19	□□□□□ -1.74
TPA1	YER049W	PUT4	P15380	627 aa		4.19	□□□□□ -1.74
TPA1	YER049W	MEF1	P25039	761 aa		4.19	□□□□□ -1.74
TPA1	YER049W	SNT1	P25357	1226 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YCR015C	P25616	317 aa		4.19	□□□□□ -1.74
TPA1	YER049W	MEI4	P29467	408 aa		4.19	□□□□□ -1.74
TPA1	YER049W	KAR9	P32526	644 aa		4.19	□□□□□ -1.74
TPA1	YER049W	SPR1	P32603	445 aa		4.19	□□□□□ -1.74
TPA1	YER049W	MCR1	P36060	302 aa	Known RBP	4.19	□□□□□ -1.74
TPA1	YER049W	STV1	P37296	890 aa		4.19	□□□□□ -1.74
TPA1	YER049W	BAP2	P38084	609 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YMC2	P38087	329 aa		4.19	□□□□□ -1.74
TPA1	YER049W	LAM1	P38851	1228 aa		4.19	□□□□□ -1.74
TPA1	YER049W	SHC1	P39000	512 aa		4.19	□□□□□ -1.74
TPA1	YER049W	ACA1	P39970	489 aa		4.19	□□□□□ -1.74
TPA1	YER049W	HMF1	P40037	129 aa	Known RBP	4.19	□□□□□ -1.74
TPA1	YER049W	CAB2	P40506	365 aa		4.19	□□□□□ -1.74
TPA1	YER049W	LAM5	P43560	674 aa		4.19	□□□□□ -1.74
TPA1	YER049W	POL31	P46957	487 aa		4.19	□□□□□ -1.74
TPA1	YER049W	SET2	P46995	733 aa	Known RBP	4.19	□□□□□ -1.74
TPA1	YER049W	HSV2	P50079	448 aa	Predicted RBP	4.19	□□□□□ -1.74
TPA1	YER049W	YNL146W	P53906	100 aa		4.19	□□□□□ -1.74
TPA1	YER049W	TMA20	P89886	181 aa	Predicted RBP	4.19	□□□□□ -1.74
TPA1	YER049W	TRS130	Q03660	1102 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YVC1	Q12324	675 aa		4.19	□□□□□ -1.74
TPA1	YER049W	YPR071W	Q12346	211 aa		4.19	□□□□□ -1.74
TPA1	YER049W	ATG11	Q12527	1178 aa		4.19	□□□□□ -1.74
TPA1	YER049W	CTT1	P06115	562 aa		4.18	□□□□□ -1.74
TPA1	YER049W	TUB1	P09733	447 aa	Known RBP	4.18	□□□□□ -1.74
TPA1	YER049W	SAM1	P10659	382 aa	Known RBP	4.18	□□□□□ -1.74
TPA1	YER049W	SAM35	P14693	329 aa		4.18	□□□□□ -1.74
TPA1	YER049W	SAN1	P22470	610 aa		4.18	□□□□□ -1.74
TPA1	YER049W	DPB2	P24482	689 aa	Predicted RBP	4.18	□□□□□ -1.74
TPA1	YER049W	TSR4	P25040	408 aa		4.18	□□□□□ -1.74
TPA1	YER049W	GFD2	P25370	566 aa	Known RBP	4.18	□□□□□ -1.74
TPA1	YER049W	ADY2	P25613	283 aa		4.18	□□□□□ -1.74
TPA1	YER049W	PRO1	P32264	428 aa		4.18	□□□□□ -1.74
TPA1	YER049W	WHI3	P34761	661 aa	Known RBP	4.18	□□□□□ -1.74
TPA1	YER049W	SLM4	P38247	162 aa		4.18	□□□□□ -1.74
TPA1	YER049W	CBR1	P38626	284 aa	Known RBP	4.18	□□□□□ -1.74
TPA1	YER049W	CKB2	P38930	258 aa		4.18	□□□□□ -1.74
TPA1	YER049W	CUL3	P53202	744 aa		4.18	□□□□□ -1.74
TPA1	YER049W	COG2	P53271	262 aa		4.18	□□□□□ -1.74
TPA1	YER049W	TPO2	P53283	614 aa		4.18	□□□□□ -1.74
TPA1	YER049W	TNA1	P53322	534 aa		4.18	□□□□□ -1.74
TPA1	YER049W	YPR003C	P53394	754 aa		4.18	□□□□□ -1.74
TPA1	YER049W	PRO2	P54885	456 aa	Known RBP	4.18	□□□□□ -1.74
TPA1	YER049W	YPL062W	Q02781	134 aa		4.18	□□□□□ -1.74
TPA1	YER049W	CEF1	Q03654	590 aa	Predicted RBP	4.18	□□□□□ -1.74
TPA1	YER049W	ECM7	Q06200	448 aa		4.18	□□□□□ -1.74
TPA1	YER049W	MCH5	Q08777	521 aa		4.18	□□□□□ -1.74
TPA1	YER049W	OSW2	Q12202	724 aa		4.18	□□□□□ -1.74
TPA1	YER049W	KCS1	Q12494	1050 aa		4.18	□□□□□ -1.74
TPA1	YER049W	PCD1	Q12524	340 aa		4.18	□□□□□ -1.74
TPA1	YER049W	YGR161W-C	Q3E744	92 aa		4.18	□□□□□ -1.74
TPA1	YER049W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
TPA1	YER049W	PER1	P25625	357 aa		4.17	□□□□□ -1.74
TPA1	YER049W	SEC1	P30619	724 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	DPH2	P32461	534 aa		4.17	□□□□□ -1.74
TPA1	YER049W	BEM3	P32873	1128 aa		4.17	□□□□□ -1.74
TPA1	YER049W	TVP38	P36164	337 aa		4.17	□□□□□ -1.74
TPA1	YER049W	PDX3	P38075	228 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	GEM1	P39722	662 aa		4.17	□□□□□ -1.74
TPA1	YER049W	SAH1	P39954	449 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	NIT1	P40447	199 aa		4.17	□□□□□ -1.74
TPA1	YER049W	SNL1	P40548	159 aa		4.17	□□□□□ -1.74
TPA1	YER049W	MND2	P40577	368 aa		4.17	□□□□□ -1.74
TPA1	YER049W	YGR054W	P53235	642 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	DCP2	P53550	970 aa	Known RBP	4.17	□□□□□ -1.74
TPA1	YER049W	YSH1	Q06224	779 aa	Predicted RBP	4.17	□□□□□ -1.74
TPA1	YER049W	ASA1	Q06822	443 aa		4.17	□□□□□ -1.74
TPA1	YER049W	AIM39	Q08223	395 aa		4.17	□□□□□ -1.74
TPA1	YER049W	YLL056C	Q12177	298 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms