RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	GTT1	P40582	234 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	NUP42	P49686	430 aa	Known RBP	5.24	□□□□□ -1.57
DBF4	YDR052C	SEH1	P53011	349 aa	Known RBP	5.24	□□□□□ -1.57
DBF4	YDR052C	ROM1	P53046	1155 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	SNF12	P53628	566 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	YDR541C	Q03049	344 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	UTP14	Q04500	899 aa	Known RBP	5.24	□□□□□ -1.57
DBF4	YDR052C	TDA9	Q04545	1251 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	PDR8	Q06149	701 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	FEX2	Q08991	375 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	REX3	Q12090	404 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	YOR214C	Q12282	236 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	ATP14	Q12349	124 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	PTC5	Q12511	572 aa		5.24	□□□□□ -1.57
DBF4	YDR052C	SEC7	P11075	2009 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
DBF4	YDR052C	STE3	P06783	470 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	PEP5	P12868	1029 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	PFK1	P16861	987 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	CBF1	P17106	351 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	CBP3	P21560	335 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	SAN1	P22470	610 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	MCM5	P29496	775 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	SIP2	P34164	415 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	SKG1	P36169	355 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	SSO2	P39926	295 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	TPA1	P40032	644 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	SOK1	P40317	901 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	ALR2	P43553	858 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	MRK1	P50873	501 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	NMA2	P53204	395 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	YGR026W	P53217	278 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	TWF1	P53250	332 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	YGR125W	P53273	1036 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	YNL193W	P53870	558 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	HXT15	P54854	567 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	SHR3	Q02774	210 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	ARL3	Q02804	198 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	SPP1	Q03012	353 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	YML131W	Q03102	365 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	RSC9	Q03124	581 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	YMR187C	Q03236	431 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	SPC2	Q04969	178 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	GMC2	Q06201	188 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	NGL1	Q08213	363 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	MUM3	Q08750	479 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	OXR1	Q08952	273 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	THI21	Q08975	551 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	YOR012W	Q12351	137 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	GRX6	Q12438	231 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	ATP2	P00830	511 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	RIP-Chip
DBF4	YDR052C	PHO4	P07270	312 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	SNF4	P12904	322 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	TOP3	P13099	656 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	PHO81	P17442	1178 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	VMA16	P23968	213 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	SRO9	P25567	434 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	DAL80	P26343	269 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	PMT1	P33775	817 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	TOM20	P35180	183 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	EDS1	P38073	919 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	YMR262W	P38430	313 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	SEN34	P39707	275 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	MSS2	P40990	351 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	GUF1	P46943	645 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	RTT101	P47050	842 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	PRP24	P49960	444 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	YPT32	P51996	222 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	PIP2	P52960	996 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	NIS1	P53939	407 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	NAN1	Q02931	896 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	NGL2	Q03264	515 aa	Known RBP	5.23	□□□□□ -1.57
DBF4	YDR052C	SCS7	Q03529	384 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	SEG1	Q04279	960 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	CSC1	Q06538	782 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	ADF1	Q2V2Q1	113 aa		5.23	□□□□□ -1.57
DBF4	YDR052C	NUC1	P08466	329 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	CDC23	P16522	626 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	SNT1	P25357	1226 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	PTC6	P25646	442 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	YKL023W	P36103	277 aa	Known RBP	5.22	□□□□□ -1.57
DBF4	YDR052C	POP7	P38291	140 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	ORC6	P38826	435 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	FRT2	P39734	528 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	CSM2	P40465	213 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	PRK1	P40494	810 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	MMM1	P41800	426 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	CAF16	P43569	289 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	SAP4	P53036	818 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	YGL117W	P53133	265 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	YTP1	P53584	459 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	APP1	P53933	587 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	DAK1	P54838	584 aa	Known RBP	5.22	□□□□□ -1.57
DBF4	YDR052C	YMR226C	Q05016	267 aa	Known RBP	5.22	□□□□□ -1.57
DBF4	YDR052C	BSC2	Q05611	235 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	GPN3	Q06543	272 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	PGC1	Q08959	321 aa		5.22	□□□□□ -1.57
DBF4	YDR052C	GET3	Q12154	354 aa	Known RBP	5.22	□□□□□ -1.57
DBF4	YDR052C	OSW2	Q12202	724 aa		5.22	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms