RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W GCN2P15442 1659 aa6.22□□□□□ -1.41
TRP1YDR007W TSC11P40061 1430 aa6.22□□□□□ -1.41
TRP1YDR007W TY1B-BRQ12193 1756 aa6.21□□□□□ -1.41
TRP1YDR007W TY1B-GR3Q12316 1755 aa6.21□□□□□ -1.41
TRP1YDR007W TY1B-ORQ92393 1755 aa6.21□□□□□ -1.41
TRP1YDR007W MTG2P38860 518 aa6.21□□□□□ -1.42
TRP1YDR007W MAM1P40065 302 aa6.21□□□□□ -1.42
TRP1YDR007W CIR1P42940 261 aa6.21□□□□□ -1.42
TRP1YDR007W YMR206WQ03695 313 aa6.21□□□□□ -1.42
TRP1YDR007W CRT10Q08226 957 aa6.21□□□□□ -1.42
TRP1YDR007W RRG1Q12167 365 aaPredicted RBP6.21□□□□□ -1.42
TRP1YDR007W PRS5Q12265 496 aaKnown RBP6.21□□□□□ -1.42
TRP1YDR007W CDC25P04821 1589 aa6.21□□□□□ -1.42
TRP1YDR007W KGD2P19262 463 aaPredicted RBP6.2□□□□□ -1.42
TRP1YDR007W CDC15P27636 974 aa6.2□□□□□ -1.42
TRP1YDR007W PEP3P27801 918 aa6.2□□□□□ -1.42
TRP1YDR007W SRB5P32585 307 aa6.2□□□□□ -1.42
TRP1YDR007W TRM2P33753 639 aa6.2□□□□□ -1.42
TRP1YDR007W RPF2P36160 344 aaKnown RBP6.2□□□□□ -1.42
TRP1YDR007W MED8P38304 223 aa6.2□□□□□ -1.42
TRP1YDR007W RTS1P38903 757 aa6.2□□□□□ -1.42
TRP1YDR007W UBP5P39944 805 aa6.2□□□□□ -1.42
TRP1YDR007W LAS21P40367 830 aa6.2□□□□□ -1.42
TRP1YDR007W IME4P41833 600 aa6.2□□□□□ -1.42
TRP1YDR007W RMD8P43620 662 aa6.2□□□□□ -1.42
TRP1YDR007W UBP16Q02863 499 aa6.2□□□□□ -1.42
TRP1YDR007W YDR179W-AQ03983 463 aa6.2□□□□□ -1.42
TRP1YDR007W MRI1Q06489 411 aaKnown RBP6.2□□□□□ -1.42
TRP1YDR007W YDL242WQ07746 117 aa6.2□□□□□ -1.42
TRP1YDR007W RCN2Q12044 265 aa6.2□□□□□ -1.42
TRP1YDR007W NMD4Q12129 218 aa6.2□□□□□ -1.42
TRP1YDR007W YOR019WQ99248 730 aa6.2□□□□□ -1.42
TRP1YDR007W ARG3P05150 338 aa6.19□□□□□ -1.42
TRP1YDR007W CKA1P15790 372 aa6.19□□□□□ -1.42
TRP1YDR007W RFA2P26754 273 aaKnown RBP6.19□□□□□ -1.42
TRP1YDR007W FLC2P39719 783 aa6.19□□□□□ -1.42
TRP1YDR007W TPA1P40032 644 aaKnown RBP6.19□□□□□ -1.42
TRP1YDR007W UBX6P47049 396 aa6.19□□□□□ -1.42
TRP1YDR007W DSD1P53095 428 aa6.19□□□□□ -1.42
TRP1YDR007W VPS75P53853 264 aa6.19□□□□□ -1.42
TRP1YDR007W INN1P53901 409 aa6.19□□□□□ -1.42
TRP1YDR007W KIN4Q01919 800 aa6.19□□□□□ -1.42
TRP1YDR007W YML119WQ03208 357 aa6.19□□□□□ -1.42
TRP1YDR007W GFD1Q04839 188 aaKnown RBP6.19□□□□□ -1.42
TRP1YDR007W UTP21Q06078 939 aaPredicted RBP6.19□□□□□ -1.42
TRP1YDR007W RIX7Q07844 837 aaKnown RBP6.19□□□□□ -1.42
TRP1YDR007W CTI6Q08923 506 aa6.19□□□□□ -1.42
TRP1YDR007W MDM20Q12387 796 aaKnown RBP6.19□□□□□ -1.42
TRP1YDR007W CHO2P05374 869 aaKnown RBP6.18□□□□□ -1.42
TRP1YDR007W WHI2P12611 486 aa6.18□□□□□ -1.42
TRP1YDR007W AMD2P22580 549 aa6.18□□□□□ -1.42
TRP1YDR007W YMR124WP39523 943 aaKnown RBP6.18□□□□□ -1.42
TRP1YDR007W JHD1P40034 492 aa6.18□□□□□ -1.42
TRP1YDR007W MRX6P48564 524 aa6.18□□□□□ -1.42
TRP1YDR007W YNR061CP53747 219 aa6.18□□□□□ -1.42
TRP1YDR007W YNL092WP53934 400 aa6.18□□□□□ -1.42
TRP1YDR007W GRX3Q03835 250 aa6.18□□□□□ -1.42
TRP1YDR007W ZPS1Q12512 249 aa6.18□□□□□ -1.42
TRP1YDR007W VTH1P40438 1549 aa6.18□□□□□ -1.42
TRP1YDR007W VTH2P40890 1549 aa6.18□□□□□ -1.42
TRP1YDR007W COX1P00401 534 aa6.17□□□□□ -1.42
TRP1YDR007W RED1P14291 827 aa6.17□□□□□ -1.42
TRP1YDR007W RNR3P21672 869 aaKnown RBP6.17□□□□□ -1.42
TRP1YDR007W NPL6P32832 435 aa6.17□□□□□ -1.42
TRP1YDR007W BDH2P39713 417 aa6.17□□□□□ -1.42
TRP1YDR007W NPA3P47122 385 aa6.17□□□□□ -1.42
TRP1YDR007W COQ6P53318 479 aa6.17□□□□□ -1.42
TRP1YDR007W YPL071CQ02864 156 aa6.17□□□□□ -1.42
TRP1YDR007W NGL3Q03210 505 aa6.17□□□□□ -1.42
TRP1YDR007W YDR109CQ04585 715 aa6.17□□□□□ -1.42
TRP1YDR007W TCO89Q08921 799 aa6.17□□□□□ -1.42
TRP1YDR007W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
TRP1YDR007W BAG7Q12128 409 aa6.17□□□□□ -1.42
TRP1YDR007W ACF2Q12168 779 aa6.17□□□□□ -1.42
TRP1YDR007W AI5_ALPHAQ9ZZX1 630 aa6.17□□□□□ -1.42
TRP1YDR007W YBR085C-AO43137 85 aa6.16□□□□□ -1.42
TRP1YDR007W MET17P06106 444 aa6.16□□□□□ -1.42
TRP1YDR007W MRPL9P31334 269 aa6.16□□□□□ -1.42
TRP1YDR007W ZUO1P32527 433 aaKnown RBP6.16□□□□□ -1.42
TRP1YDR007W MAL33P38157 468 aa6.16□□□□□ -1.42
TRP1YDR007W UTP9P38882 575 aaKnown RBP6.16□□□□□ -1.42
TRP1YDR007W YNL050CP53952 270 aa6.16□□□□□ -1.42
TRP1YDR007W MUK1Q02866 612 aa6.16□□□□□ -1.42
TRP1YDR007W YML053CQ04978 212 aa6.16□□□□□ -1.42
TRP1YDR007W SKG3Q06315 1026 aa6.16□□□□□ -1.42
TRP1YDR007W CRN1Q06440 651 aa6.16□□□□□ -1.42
TRP1YDR007W SPN1Q06505 410 aaPredicted RBP6.16□□□□□ -1.42
TRP1YDR007W HBT1Q07653 1046 aaKnown RBP6.16□□□□□ -1.42
TRP1YDR007W CIR2Q08822 631 aa6.16□□□□□ -1.42
TRP1YDR007W PDR15Q04182 1529 aaKnown RBP6.15□□□□□ -1.42
TRP1YDR007W CET1O13297 549 aaPredicted RBP6.15□□□□□ -1.42
TRP1YDR007W OCA4P25366 362 aa6.15□□□□□ -1.42
TRP1YDR007W RAD51P25454 400 aa6.15□□□□□ -1.42
TRP1YDR007W HES1P35843 434 aa6.15□□□□□ -1.42
TRP1YDR007W ERC1P38767 581 aa6.15□□□□□ -1.42
TRP1YDR007W SPO22P40511 975 aa6.15□□□□□ -1.42
TRP1YDR007W COG2P53271 262 aa6.15□□□□□ -1.42
TRP1YDR007W SFI1Q12369 946 aa6.15□□□□□ -1.42
TRP1YDR007W CPA2P03965 1118 aaKnown RBP6.14□□□□□ -1.43
TRP1YDR007W RAD3P06839 778 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms