RNA–Protein interactions for RNA: YCR054C

CTR86, Transcript of Essential protein of unknown function, yeast

Gene CTR86, Length 1,692 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR86	YCR054C	MGR3	Q04472	501 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	VTA1	Q06263	330 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	YDL073W	Q07454	984 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	MLH2	Q07980	695 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	GCD1	P09032	578 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR86	YCR054C	YML003W	P0CF16	290 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	VMA16	P23968	213 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	LTV1	P34078	463 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	GDT1	P38301	280 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR86	YCR054C	SDH8	P38345	138 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	FMO1	P38866	432 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	YHR218W	P38899	603 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	ATF1	P40353	525 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	EFM4	P40516	257 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	DLD2	P46681	530 aa	Known RBP	4.16	□□□□□ -1.74
CTR86	YCR054C	CTR1	P49573	406 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	YGL036W	P53185	909 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR86	YCR054C	MRPS35	P53292	345 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	SNO2	P53823	222 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	MAK10	Q02197	733 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	YMR111C	Q04461	462 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR86	YCR054C	RXT3	Q07458	294 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	FMP40	Q08968	688 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR86	YCR054C	YPL272C	Q08984	517 aa		4.16	□□□□□ -1.74
CTR86	YCR054C	RPN5	Q12250	445 aa	Known RBP	4.16	□□□□□ -1.74
CTR86	YCR054C	PHO84	P25297	587 aa	Known RBP	4.15	□□□□□ -1.75
CTR86	YCR054C	ERV1	P27882	189 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	NIP100	P33420	868 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	HEL1	P36113	551 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	SIF2	P38262	535 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	SEC24	P40482	926 aa	Known RBP	4.15	□□□□□ -1.75
CTR86	YCR054C	FKH2	P41813	862 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	CTK2	P46962	323 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	PET130	P47065	347 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	CTH1	P47976	325 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	LYS4	P49367	693 aa	Predicted RBP	4.15	□□□□□ -1.75
CTR86	YCR054C	YGR111W	P53265	400 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	RPA49	Q01080	415 aa	Predicted RBP	4.15	□□□□□ -1.75
CTR86	YCR054C	ARX1	Q03862	593 aa	Known RBP	4.15	□□□□□ -1.75
CTR86	YCR054C	SOV1	Q04748	898 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	TDA6	Q06466	467 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	ISN1	Q99312	450 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	INO80	P53115	1489 aa		4.15	□□□□□ -1.75
CTR86	YCR054C	GAL80	P04387	435 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	ARD1	P07347	238 aa	Predicted RBP	4.14	□□□□□ -1.75
CTR86	YCR054C	CAF20	P12962	161 aa	Known RBP	4.14	□□□□□ -1.75
CTR86	YCR054C	MVD1	P32377	396 aa	Known RBP	4.14	□□□□□ -1.75
CTR86	YCR054C	YEL043W	P32618	956 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	MRE11	P32829	692 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	SEC66	P33754	206 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	PMT1	P33775	817 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	SEF1	P34228	1148 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	KAE1	P36132	386 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	GND1	P38720	489 aa	Known RBP	4.14	□□□□□ -1.75
CTR86	YCR054C	RTT105	P40063	208 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	PKP1	P40530	394 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	HXT14	P42833	540 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	MSE1	P48525	536 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	IMO32	P53219	342 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	SPC98	P53540	846 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	SNF12	P53628	566 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	RIA1	P53893	1110 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
CTR86	YCR054C	FIN1	Q03898	291 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	DON1	Q05610	365 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	IZH3	Q07959	543 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	BAG7	Q12128	409 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	PRS5	Q12265	496 aa	Known RBP	4.14	□□□□□ -1.75
CTR86	YCR054C	YLR122C	Q12312	125 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	SEC39	Q12745	709 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	YER175W-A	Q8TGU4	54 aa		4.14	□□□□□ -1.75
CTR86	YCR054C	CDC6	P09119	513 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	MSS1	P32559	526 aa	Predicted RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	ETP1	P38748	585 aa	Known RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	FUN12	P39730	1002 aa	Known RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	ICP55	P40051	511 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
CTR86	YCR054C	MPS3	P47069	682 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	MNP1	P53163	194 aa	Predicted RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	YAT1	P80235	687 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	ARG7	Q04728	441 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	YLR456W	Q06199	204 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	MMR1	Q06324	491 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	DCI1	Q08558	271 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	GPN2	Q08726	347 aa	Predicted RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	YDR215C	Q12240	137 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	MF(ALPHA)1	P01149	165 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	RPL6B	P05739	176 aa	Known RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	EST1	P17214	699 aa	Predicted RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	KGD2	P19262	463 aa	Predicted RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	APN1	P22936	367 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	CAD1	P24813	409 aa	Known RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	KAR4	P25583	335 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	WBP1	P33767	430 aa	Known RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	HCS1	P34243	683 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	TCD2	P36101	447 aa	Known RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	MRPL7	P36519	292 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	YHR097C	P38809	366 aa	Known RBP	4.13	□□□□□ -1.75
CTR86	YCR054C	MEF2	P39677	819 aa		4.13	□□□□□ -1.75
CTR86	YCR054C	ALG5	P40350	334 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms