RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W DFG16Q99234 619 aa3.49□□□□□ -1.85
NUP60YAR002W MOT1P32333 1867 aa3.49□□□□□ -1.85
NUP60YAR002W ECM29P38737 1868 aa3.49□□□□□ -1.85
NUP60YAR002W LAA1P39526 2014 aa3.49□□□□□ -1.85
NUP60YAR002W IMA3P0CW40 589 aa3.48□□□□□ -1.85
NUP60YAR002W IMA4P0CW41 589 aa3.48□□□□□ -1.85
NUP60YAR002W PMR1P13586 950 aa3.48□□□□□ -1.85
NUP60YAR002W YCR015CP25616 317 aa3.48□□□□□ -1.85
NUP60YAR002W URA7P28274 579 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W PDB1P32473 366 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W FRE1P32791 686 aa3.48□□□□□ -1.85
NUP60YAR002W BUD2P33314 1104 aa3.48□□□□□ -1.85
NUP60YAR002W KDX1P36005 433 aa3.48□□□□□ -1.85
NUP60YAR002W APN2P38207 520 aa3.48□□□□□ -1.85
NUP60YAR002W YBP1P38315 674 aa3.48□□□□□ -1.85
NUP60YAR002W YBR238CP38330 731 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W ETP1P38748 585 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W SMF2P38778 549 aa3.48□□□□□ -1.85
NUP60YAR002W CKB2P38930 258 aa3.48□□□□□ -1.85
NUP60YAR002W SCC4P40090 624 aa3.48□□□□□ -1.85
NUP60YAR002W TOK1P40310 691 aa3.48□□□□□ -1.85
NUP60YAR002W ECL1P48235 211 aa3.48□□□□□ -1.85
NUP60YAR002W ALG12P53730 551 aa3.48□□□□□ -1.85
NUP60YAR002W BRE5P53741 515 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W SNO2P53823 222 aa3.48□□□□□ -1.85
NUP60YAR002W YNL134CP53912 376 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W YPR196WQ06595 470 aa3.48□□□□□ -1.85
NUP60YAR002W IMA2Q08295 589 aa3.48□□□□□ -1.85
NUP60YAR002W DNL4Q08387 944 aaPredicted RBP3.48□□□□□ -1.85
NUP60YAR002W VHS3Q08438 674 aa3.48□□□□□ -1.85
NUP60YAR002W THI21Q08975 551 aa3.48□□□□□ -1.85
NUP60YAR002W RIB2Q12362 591 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W CYC1P00044 109 aaPredicted RBP3.48□□□□□ -1.85
NUP60YAR002W SSC1P0CS90 654 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W CMP2P14747 604 aa3.48□□□□□ -1.85
NUP60YAR002W PRP4P20053 465 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W LRE1P25579 583 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W CDC20P26309 610 aa3.48□□□□□ -1.85
NUP60YAR002W GAC1P28006 793 aa3.48□□□□□ -1.85
NUP60YAR002W CYS3P31373 394 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W THI4P32318 326 aa3.48□□□□□ -1.85
NUP60YAR002W HXT3P32466 567 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W HSL7P38274 827 aa3.48□□□□□ -1.85
NUP60YAR002W DIA4P38705 446 aaPredicted RBP3.48□□□□□ -1.85
NUP60YAR002W LIN1P38852 340 aaPredicted RBP3.48□□□□□ -1.85
NUP60YAR002W REV7P38927 245 aa3.48□□□□□ -1.85
NUP60YAR002W GDH3P39708 457 aa3.48□□□□□ -1.85
NUP60YAR002W AVT2P39981 480 aa3.48□□□□□ -1.85
NUP60YAR002W AZR1P50080 613 aa3.48□□□□□ -1.85
NUP60YAR002W STB4P50104 949 aa3.48□□□□□ -1.85
NUP60YAR002W PCL10P53124 433 aa3.48□□□□□ -1.85
NUP60YAR002W YGR283CP53336 341 aaPredicted RBP3.48□□□□□ -1.85
NUP60YAR002W LSC1P53598 329 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W SFB2P53953 876 aa3.48□□□□□ -1.85
NUP60YAR002W SLG1P54867 378 aa3.48□□□□□ -1.85
NUP60YAR002W MUB1Q03162 620 aa3.48□□□□□ -1.85
NUP60YAR002W ADE13Q05911 482 aaKnown RBP3.48□□□□□ -1.85
NUP60YAR002W TPO1Q07824 586 aa3.48□□□□□ -1.85
NUP60YAR002W XYL2Q07993 356 aa3.48□□□□□ -1.85
NUP60YAR002W THI20Q08224 551 aa3.48□□□□□ -1.85
NUP60YAR002W YLL056CQ12177 298 aa3.48□□□□□ -1.85
NUP60YAR002W IZH4Q99393 312 aa3.48□□□□□ -1.85
NUP60YAR002W TEF1P02994 458 aaKnown RBP3.47□□□□□ -1.85
NUP60YAR002W VPS3P23643 1011 aa3.47□□□□□ -1.85
NUP60YAR002W RSA4P25382 515 aaKnown RBP3.47□□□□□ -1.85
NUP60YAR002W HEL1P36113 551 aa3.47□□□□□ -1.85
NUP60YAR002W DRE2P36152 348 aa3.47□□□□□ -1.85
NUP60YAR002W ETR1P38071 380 aa3.47□□□□□ -1.85
NUP60YAR002W HSM3P38348 480 aa3.47□□□□□ -1.85
NUP60YAR002W YHL026CP38740 315 aa3.47□□□□□ -1.85
NUP60YAR002W ALD5P40047 520 aaKnown RBP3.47□□□□□ -1.85
NUP60YAR002W MND2P40577 368 aa3.47□□□□□ -1.85
NUP60YAR002W TMA22P47089 198 aaPredicted RBP3.47□□□□□ -1.85
NUP60YAR002W TAH11P47112 604 aa3.47□□□□□ -1.85
NUP60YAR002W LIA1P47120 325 aaKnown RBP3.47□□□□□ -1.85
NUP60YAR002W RFX1P48743 811 aa3.47□□□□□ -1.85
NUP60YAR002W GCV2P49095 1034 aa3.47□□□□□ -1.85
NUP60YAR002W NIT3P49954 291 aa3.47□□□□□ -1.85
NUP60YAR002W HSV2P50079 448 aaPredicted RBP3.47□□□□□ -1.85
NUP60YAR002W ALT2P52892 507 aa3.47□□□□□ -1.85
NUP60YAR002W TAF6P53040 516 aa3.47□□□□□ -1.85
NUP60YAR002W GTR1Q00582 310 aa3.47□□□□□ -1.85
NUP60YAR002W BET4Q00618 327 aa3.47□□□□□ -1.85
NUP60YAR002W SLT2Q00772 484 aa3.47□□□□□ -1.85
NUP60YAR002W SPC24Q04477 213 aa3.47□□□□□ -1.85
NUP60YAR002W CUE5Q08412 411 aaKnown RBP3.47□□□□□ -1.85
NUP60YAR002W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
NUP60YAR002W YLR053CQ12026 108 aa3.47□□□□□ -1.85
NUP60YAR002W YOR022CQ12204 715 aa3.47□□□□□ -1.85
NUP60YAR002W YDL177CQ12257 170 aa3.47□□□□□ -1.85
NUP60YAR002W SUT2Q12286 268 aa3.47□□□□□ -1.85
NUP60YAR002W GPM3Q12326 303 aa3.47□□□□□ -1.85
NUP60YAR002W RIF1P29539 1916 aa3.46□□□□□ -1.86
NUP60YAR002W TPK1P06244 397 aa3.46□□□□□ -1.86
NUP60YAR002W ARD1P07347 238 aaPredicted RBP3.46□□□□□ -1.86
NUP60YAR002W YMR085WP0CF18 432 aa3.46□□□□□ -1.86
NUP60YAR002W GPA2P10823 449 aa3.46□□□□□ -1.86
NUP60YAR002W HSF1P10961 833 aa3.46□□□□□ -1.86
NUP60YAR002W RNA1P11745 407 aaKnown RBP3.46□□□□□ -1.86
NUP60YAR002W TSR4P25040 408 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms