RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	SMA1	Q02651	245 aa		2.87	□□□□□ -1.95
RUD3	YOR216C	DAP1	Q12091	152 aa		2.87	□□□□□ -1.95
RUD3	YOR216C	COX1	P00401	534 aa		2.86	□□□□□ -1.95
RUD3	YOR216C	PDA1	P16387	420 aa	Known RBP	2.86	□□□□□ -1.95
RUD3	YOR216C	RPS7A	P26786	190 aa	Known RBP	2.86	□□□□□ -1.95
RUD3	YOR216C	HES1	P35843	434 aa		2.86	□□□□□ -1.95
RUD3	YOR216C	POL31	P46957	487 aa		2.86	□□□□□ -1.95
RUD3	YOR216C	YGR237C	P50089	785 aa		2.86	□□□□□ -1.95
RUD3	YOR216C	YBR255C-A	Q3E776	120 aa		2.86	□□□□□ -1.95
RUD3	YOR216C	YER145C-A	A0A023PYF4	145 aa		2.85	□□□□□ -1.95
RUD3	YOR216C	TOP1	P04786	769 aa		2.85	□□□□□ -1.95
RUD3	YOR216C	CTT1	P06115	562 aa		2.85	□□□□□ -1.95
RUD3	YOR216C	CBS2	P14905	389 aa		2.84	□□□□□ -1.95
RUD3	YOR216C	PDE1	P22434	369 aa		2.84	□□□□□ -1.95
RUD3	YOR216C	PRO3	P32263	286 aa	Known RBP	2.84	□□□□□ -1.95
RUD3	YOR216C	RPN2	P32565	945 aa	Known RBP	2.84	□□□□□ -1.95
RUD3	YOR216C	YEL068C	P39977	110 aa		2.84	□□□□□ -1.95
RUD3	YOR216C	SPC105	P53148	917 aa		2.84	□□□□□ -1.95
RUD3	YOR216C	YNL181W	P53878	407 aa		2.84	□□□□□ -1.95
RUD3	YOR216C	TRI1	Q05024	226 aa		2.84	□□□□□ -1.95
RUD3	YOR216C	ECM38	Q05902	660 aa	Predicted RBP	2.84	□□□□□ -1.95
RUD3	YOR216C	COX11	P19516	300 aa	Known RBP	2.84	□□□□□ -1.96
RUD3	YOR216C	SWC3	P31376	625 aa		2.84	□□□□□ -1.96
RUD3	YOR216C	RIM2	P38127	377 aa		2.84	□□□□□ -1.96
RUD3	YOR216C	RRT2	P38332	387 aa		2.84	□□□□□ -1.96
RUD3	YOR216C	YJR061W	P40355	935 aa		2.84	□□□□□ -1.96
RUD3	YOR216C	NIT2	P47016	307 aa		2.84	□□□□□ -1.96
RUD3	YOR216C	YGL081W	P53156	320 aa		2.84	□□□□□ -1.96
RUD3	YOR216C	BSC1	Q12140	328 aa		2.84	□□□□□ -1.96
RUD3	YOR216C	CYB2	P00175	591 aa		2.83	□□□□□ -1.96
RUD3	YOR216C	HOL1	P53389	586 aa		2.83	□□□□□ -1.96
RUD3	YOR216C	ESF2	P53743	316 aa	Known RBP	2.83	□□□□□ -1.96
RUD3	YOR216C	YNL034W	P53963	612 aa		2.83	□□□□□ -1.96
RUD3	YOR216C	LDB16	P25587	256 aa		2.82	□□□□□ -1.96
RUD3	YOR216C	MSH1	P25846	959 aa		2.82	□□□□□ -1.96
RUD3	YOR216C	TRS65	P32893	560 aa		2.82	□□□□□ -1.96
RUD3	YOR216C	SWH1	P35845	1188 aa		2.82	□□□□□ -1.96
RUD3	YOR216C	YJR142W	P47173	342 aa		2.82	□□□□□ -1.96
RUD3	YOR216C	UTP21	Q06078	939 aa	Predicted RBP	2.82	□□□□□ -1.96
RUD3	YOR216C	SLD3	P53135	668 aa		2.81	□□□□□ -1.96
RUD3	YOR216C	LSB5	P25369	354 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	BUD14	P27637	709 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	HEM12	P32347	362 aa	Predicted RBP	2.8	□□□□□ -1.96
RUD3	YOR216C	PDR3	P33200	976 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	YPK3	P38070	525 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	FUN12	P39730	1002 aa	Known RBP	2.8	□□□□□ -1.96
RUD3	YOR216C	YGR079W	P53249	370 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	VPS64	Q03944	604 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	YDR109C	Q04585	715 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	AIM6	Q07716	390 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	PPT2	Q12036	173 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	PSF3	Q12146	194 aa		2.8	□□□□□ -1.96
RUD3	YOR216C	UBX6	P47049	396 aa		2.79	□□□□□ -1.96
RUD3	YOR216C	BOR1	P53838	576 aa		2.79	□□□□□ -1.96
RUD3	YOR216C	DOS2	P54858	310 aa		2.79	□□□□□ -1.96
RUD3	YOR216C	YLR455W	Q06188	304 aa		2.79	□□□□□ -1.96
RUD3	YOR216C	MRP2	P10663	115 aa	Predicted RBP	2.78	□□□□□ -1.96
RUD3	YOR216C	GUK1	P15454	187 aa	Known RBP	2.78	□□□□□ -1.96
RUD3	YOR216C	SCS2	P40075	244 aa	Known RBP	2.78	□□□□□ -1.96
RUD3	YOR216C	YNL234W	P53857	426 aa		2.78	□□□□□ -1.96
RUD3	YOR216C	ASI1	P54074	624 aa		2.78	□□□□□ -1.96
RUD3	YOR216C	RSF1	Q05043	376 aa		2.78	□□□□□ -1.96
RUD3	YOR216C	YIR014W	P40570	242 aa		2.77	□□□□□ -1.97
RUD3	YOR216C	SPG5	P42933	373 aa		2.77	□□□□□ -1.97
RUD3	YOR216C	SUB1	P54000	292 aa	Known RBP	2.77	□□□□□ -1.97
RUD3	YOR216C	PEX15	Q08215	383 aa		2.77	□□□□□ -1.97
RUD3	YOR216C	SUI3	P09064	285 aa	Known RBP	2.77	□□□□□ -1.97
RUD3	YOR216C	PGI1	P12709	554 aa	Known RBP	2.77	□□□□□ -1.97
RUD3	YOR216C	EMP65	P40085	556 aa		2.77	□□□□□ -1.97
RUD3	YOR216C	MSY1	P48527	492 aa		2.77	□□□□□ -1.97
RUD3	YOR216C	CRD1	Q07560	283 aa		2.77	□□□□□ -1.97
RUD3	YOR216C	VAS1	P07806	1104 aa	Known RBP	2.76	□□□□□ -1.97
RUD3	YOR216C	GLN3	P18494	730 aa		2.76	□□□□□ -1.97
RUD3	YOR216C	TGL1	P34163	548 aa		2.76	□□□□□ -1.97
RUD3	YOR216C	PHM8	P40025	321 aa		2.76	□□□□□ -1.97
RUD3	YOR216C	YPI1	P43587	155 aa		2.76	□□□□□ -1.97
RUD3	YOR216C	EKI1	Q03764	534 aa		2.76	□□□□□ -1.97
RUD3	YOR216C	YDR415C	Q04033	374 aa	Predicted RBP	2.76	□□□□□ -1.97
RUD3	YOR216C	MCP2	Q06567	569 aa		2.76	□□□□□ -1.97
RUD3	YOR216C	CSR2	Q12734	1121 aa		2.76	□□□□□ -1.97
RUD3	YOR216C	PCT1	P13259	424 aa		2.75	□□□□□ -1.97
RUD3	YOR216C	NMD2	P38798	1089 aa	Known RBP	2.75	□□□□□ -1.97
RUD3	YOR216C	RTS1	P38903	757 aa		2.75	□□□□□ -1.97
RUD3	YOR216C	RTS3	P53289	263 aa		2.75	□□□□□ -1.97
RUD3	YOR216C	AAD4	Q07747	329 aa		2.75	□□□□□ -1.97
RUD3	YOR216C	YLR049C	Q12110	428 aa		2.75	□□□□□ -1.97
RUD3	YOR216C	STE50	P25344	346 aa		2.74	□□□□□ -1.97
RUD3	YOR216C	YLF2	P38746	405 aa		2.74	□□□□□ -1.97
RUD3	YOR216C	IMA5	P40884	581 aa		2.74	□□□□□ -1.97
RUD3	YOR216C	RTS2	P40962	232 aa		2.74	□□□□□ -1.97
RUD3	YOR216C	ASK10	P48361	1146 aa		2.74	□□□□□ -1.97
RUD3	YOR216C	PUS4	P48567	403 aa	Known RBP	2.74	□□□□□ -1.97
RUD3	YOR216C	ADE16	P54113	591 aa	Known RBP	2.74	□□□□□ -1.97
RUD3	YOR216C	ICL2	Q12031	575 aa		2.74	□□□□□ -1.97
RUD3	YOR216C	YLL056C	Q12177	298 aa		2.74	□□□□□ -1.97
RUD3	YOR216C	ADH4	P10127	382 aa		2.73	□□□□□ -1.97
RUD3	YOR216C	PHO3	P24031	467 aa		2.73	□□□□□ -1.97
RUD3	YOR216C	IAH1	P41734	238 aa		2.73	□□□□□ -1.97
RUD3	YOR216C	YJR008W	P47085	338 aa		2.73	□□□□□ -1.97
RUD3	YOR216C	VPS72	Q03388	795 aa		2.73	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 51 ms