RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	COP1	P53622	1201 aa	Known RBP	3.63	□□□□□ -1.83
TSR4	YOL022C	PLM2	Q04383	521 aa		3.63	□□□□□ -1.83
TSR4	YOL022C	SUL2	Q12325	893 aa		3.63	□□□□□ -1.83
TSR4	YOL022C	PCD1	Q12524	340 aa		3.63	□□□□□ -1.83
TSR4	YOL022C	YER175W-A	Q8TGU4	54 aa		3.63	□□□□□ -1.83
TSR4	YOL022C	SES1	P07284	462 aa	Known RBP	3.62	□□□□□ -1.83
TSR4	YOL022C	RPT3	P33298	428 aa	Known RBP	3.62	□□□□□ -1.83
TSR4	YOL022C	MUD2	P36084	527 aa	Known RBP	3.62	□□□□□ -1.83
TSR4	YOL022C	UME6	P39001	836 aa		3.62	□□□□□ -1.83
TSR4	YOL022C	UBP7	P40453	1071 aa		3.62	□□□□□ -1.83
TSR4	YOL022C	TMA108	P40462	946 aa		3.62	□□□□□ -1.83
TSR4	YOL022C	IRC7	P43623	340 aa		3.62	□□□□□ -1.83
TSR4	YOL022C	PSP1	P50896	841 aa	Known RBP	3.62	□□□□□ -1.83
TSR4	YOL022C	ESF2	P53743	316 aa	Known RBP	3.62	□□□□□ -1.83
TSR4	YOL022C	YNL058C	P53947	316 aa		3.62	□□□□□ -1.83
TSR4	YOL022C	CRF1	Q04930	467 aa		3.62	□□□□□ -1.83
TSR4	YOL022C	YML053C	Q04978	212 aa		3.62	□□□□□ -1.83
TSR4	YOL022C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.61	□□□□□ -1.83	not detected
TSR4	YOL022C	RAD16	P31244	790 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	IMP2'	P32351	346 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	CBF2	P32504	956 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	TEF4	P36008	412 aa	Known RBP	3.61	□□□□□ -1.83
TSR4	YOL022C	SPC97	P38863	823 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	LNP1	P38878	278 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	ERV46	P39727	415 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	JHD1	P40034	492 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	YIL024C	P40543	189 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	CFD1	P40558	293 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	SCW4	P53334	386 aa	Known RBP	3.61	□□□□□ -1.83
TSR4	YOL022C	CBK1	P53894	756 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	SNU56	Q03782	492 aa	Known RBP	3.61	□□□□□ -1.83
TSR4	YOL022C	COX17	Q12287	69 aa		3.61	□□□□□ -1.83
TSR4	YOL022C	GAL4	P04386	881 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	TPK1	P06244	397 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	PET122	P10355	254 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	SAN1	P22470	610 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	YCP4	P25349	247 aa	Known RBP	3.6	□□□□□ -1.83
TSR4	YOL022C	YUR1	P26725	428 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	COQ3	P27680	312 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	ERC1	P38767	581 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	NOC2	P39744	710 aa	Known RBP	3.6	□□□□□ -1.83
TSR4	YOL022C	UPF3	P48412	387 aa	Known RBP	3.6	□□□□□ -1.83
TSR4	YOL022C	TAM41	P53230	385 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	MDM1	Q01846	1127 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	YPL108W	Q02872	168 aa	Predicted RBP	3.6	□□□□□ -1.83
TSR4	YOL022C	TDA9	Q04545	1251 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	SNO4	Q04902	237 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	VAM6	Q07468	1049 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	HSP33	Q08914	237 aa	Known RBP	3.6	□□□□□ -1.83
TSR4	YOL022C	HSP32	Q08992	237 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	GET3	Q12154	354 aa	Known RBP	3.6	□□□□□ -1.83
TSR4	YOL022C	MED1	Q12321	566 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	RTP1	Q12751	981 aa		3.6	□□□□□ -1.83
TSR4	YOL022C	YPR089W	O13585	888 aa		3.59	□□□□□ -1.83
TSR4	YOL022C	FUM1	P08417	488 aa	Known RBP	3.59	□□□□□ -1.83
TSR4	YOL022C	PAH1	P32567	862 aa		3.59	□□□□□ -1.83
TSR4	YOL022C	CNS1	P33313	385 aa		3.59	□□□□□ -1.83
TSR4	YOL022C	YMR124W	P39523	943 aa	Known RBP	3.59	□□□□□ -1.83
TSR4	YOL022C	ZAP1	P47043	880 aa		3.59	□□□□□ -1.83
TSR4	YOL022C	COG1	P53079	417 aa		3.59	□□□□□ -1.83
TSR4	YOL022C	CSL4	P53859	292 aa	Predicted RBP	3.59	□□□□□ -1.83
TSR4	YOL022C	RPL15B	P54780	204 aa	Predicted RBP	3.59	□□□□□ -1.83
TSR4	YOL022C	AAC3	P18238	307 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	GSH1	P32477	678 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	VBA2	P38358	474 aa	Known RBP	3.58	□□□□□ -1.84
TSR4	YOL022C	YEL068C	P39977	110 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	BUD16	P39988	312 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	NOP16	P40007	231 aa	Known RBP	3.58	□□□□□ -1.84
TSR4	YOL022C	NDE1	P40215	560 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	RIC1	P40395	1056 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	YAT1	P80235	687 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	AAT1	Q01802	451 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	IMH1	Q06704	911 aa	Known RBP	3.58	□□□□□ -1.84
TSR4	YOL022C	YPL191C	Q08930	360 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	HER1	Q12276	1246 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	ENT1	Q12518	454 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	YBR255C-A	Q3E776	120 aa		3.58	□□□□□ -1.84
TSR4	YOL022C	ATP2	P00830	511 aa	Known RBP	3.57	□□□□□ -1.84
TSR4	YOL022C	ILS1	P09436	1072 aa	Known RBP	3.57	□□□□□ -1.84
TSR4	YOL022C	CDC16	P09798	840 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-LR1	P0C2J4	438 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-F	P0CX61	438 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-GR2	P0CX62	438 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	AIM17	P23180	465 aa	Known RBP	3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-C	P25383	438 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	URK1	P27515	501 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	SWC3	P31376	625 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	MPE1	P35728	441 aa	Known RBP	3.57	□□□□□ -1.84
TSR4	YOL022C	RPF2	P36160	344 aa	Known RBP	3.57	□□□□□ -1.84
TSR4	YOL022C	PSD1	P39006	500 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	SKP2	P42843	763 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	SCS3	P53012	380 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-DR2	Q03483	438 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	STP3	Q05937	343 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	YOR389W	Q08912	624 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	PFA4	Q12006	378 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-B	Q12260	438 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-OR2	Q12293	438 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-DR1	Q12392	438 aa		3.57	□□□□□ -1.84
TSR4	YOL022C	TY2A-OR1	Q12439	438 aa		3.57	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms