RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeast

Gene SSU72, Length 621 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSU72	YNL222W	OCT1	P35999	772 aa		4.66	□□□□□ -1.66
SSU72	YNL222W	YHL041W	P38730	149 aa		4.66	□□□□□ -1.66
SSU72	YNL222W	MSY1	P48527	492 aa		4.66	□□□□□ -1.66
SSU72	YNL222W	MCH4	Q08268	501 aa		4.66	□□□□□ -1.66
SSU72	YNL222W	FSH1	P38777	243 aa	Known RBP	4.65	□□□□□ -1.67
SSU72	YNL222W	PUG1	P40100	303 aa		4.65	□□□□□ -1.67
SSU72	YNL222W	MEP2	P41948	499 aa		4.65	□□□□□ -1.67
SSU72	YNL222W	ERR3	P42222	437 aa		4.65	□□□□□ -1.67
SSU72	YNL222W	YGL036W	P53185	909 aa	Predicted RBP	4.65	□□□□□ -1.67
SSU72	YNL222W	LSC1	P53598	329 aa	Known RBP	4.65	□□□□□ -1.67
SSU72	YNL222W	SUI3	P09064	285 aa	Known RBP	4.64	□□□□□ -1.67
SSU72	YNL222W	PCT1	P13259	424 aa		4.64	□□□□□ -1.67
SSU72	YNL222W	CLB4	P24871	460 aa		4.64	□□□□□ -1.67
SSU72	YNL222W	YCR006C	P25350	157 aa		4.64	□□□□□ -1.67
SSU72	YNL222W	TPA1	P40032	644 aa	Known RBP	4.64	□□□□□ -1.67
SSU72	YNL222W	YIL152W	P40455	235 aa		4.64	□□□□□ -1.67
SSU72	YNL222W	DSE3	Q08729	430 aa		4.64	□□□□□ -1.67
SSU72	YNL222W	RRP6	Q12149	733 aa	Known RBP	4.64	□□□□□ -1.67
SSU72	YNL222W	UBX3	Q12229	455 aa		4.64	□□□□□ -1.67
SSU72	YNL222W	YML003W	P0CF16	290 aa		4.63	□□□□□ -1.67
SSU72	YNL222W	RPL42A	P0CX27	106 aa	Known RBP	4.63	□□□□□ -1.67
SSU72	YNL222W	RPL42B	P0CX28	106 aa	Known RBP	4.63	□□□□□ -1.67
SSU72	YNL222W	VPS41	P38959	992 aa		4.63	□□□□□ -1.67
SSU72	YNL222W	DJP1	P40564	432 aa		4.63	□□□□□ -1.67
SSU72	YNL222W	STB2	P46679	850 aa		4.63	□□□□□ -1.67
SSU72	YNL222W	BOP3	P53958	396 aa		4.63	□□□□□ -1.67
SSU72	YNL222W	TRS130	Q03660	1102 aa		4.63	□□□□□ -1.67
SSU72	YNL222W	NUP53	Q03790	475 aa		4.63	□□□□□ -1.67
SSU72	YNL222W	BUD7	Q08754	746 aa		4.63	□□□□□ -1.67
SSU72	YNL222W	YER145C-A	A0A023PYF4	145 aa		4.62	□□□□□ -1.67
SSU72	YNL222W	GPA1	P08539	472 aa		4.62	□□□□□ -1.67
SSU72	YNL222W	YSP3	P25036	478 aa		4.62	□□□□□ -1.67
SSU72	YNL222W	LRE1	P25579	583 aa	Known RBP	4.62	□□□□□ -1.67
SSU72	YNL222W	EAF7	P53911	425 aa	Known RBP	4.62	□□□□□ -1.67
SSU72	YNL222W	YMR034C	Q05131	434 aa	Predicted RBP	4.62	□□□□□ -1.67
SSU72	YNL222W	PIG1	Q06216	648 aa		4.62	□□□□□ -1.67
SSU72	YNL222W	MLH2	Q07980	695 aa		4.62	□□□□□ -1.67
SSU72	YNL222W	GSH2	Q08220	491 aa		4.62	□□□□□ -1.67
SSU72	YNL222W	SRL1	Q08673	210 aa		4.62	□□□□□ -1.67
SSU72	YNL222W	BAG7	Q12128	409 aa		4.62	□□□□□ -1.67
SSU72	YNL222W	PHO81	P17442	1178 aa		4.61	□□□□□ -1.67
SSU72	YNL222W	YCR043C	P25361	127 aa		4.61	□□□□□ -1.67
SSU72	YNL222W	PHM8	P40025	321 aa		4.61	□□□□□ -1.67
SSU72	YNL222W	VPS25	P47142	202 aa		4.61	□□□□□ -1.67
SSU72	YNL222W	ATG23	Q06671	453 aa		4.61	□□□□□ -1.67
SSU72	YNL222W	YOL057W	Q08225	711 aa		4.61	□□□□□ -1.67
SSU72	YNL222W	NCP1	P16603	691 aa	Known RBP	4.6	□□□□□ -1.67
SSU72	YNL222W	ADE17	P38009	592 aa	Known RBP	4.6	□□□□□ -1.67
SSU72	YNL222W	EXO84	P38261	753 aa		4.6	□□□□□ -1.67
SSU72	YNL222W	ARC40	P38328	384 aa	Known RBP	4.6	□□□□□ -1.67
SSU72	YNL222W	RPT2	P40327	437 aa	Known RBP	4.6	□□□□□ -1.67
SSU72	YNL222W	VAM6	Q07468	1049 aa		4.6	□□□□□ -1.67
SSU72	YNL222W	FRE3	Q08905	711 aa		4.6	□□□□□ -1.67
SSU72	YNL222W	YLR112W	Q12130	139 aa		4.6	□□□□□ -1.67
SSU72	YNL222W	MRP2	P10663	115 aa	Predicted RBP	4.59	□□□□□ -1.67
SSU72	YNL222W	APA1	P16550	321 aa	Known RBP	4.59	□□□□□ -1.67
SSU72	YNL222W	ASG1	P40467	964 aa		4.59	□□□□□ -1.67
SSU72	YNL222W	UBP8	P50102	471 aa		4.59	□□□□□ -1.67
SSU72	YNL222W	SWA2	Q06677	668 aa		4.59	□□□□□ -1.67
SSU72	YNL222W	SWT1	Q12104	458 aa		4.59	□□□□□ -1.67
SSU72	YNL222W	ATP2	P00830	511 aa	Known RBP	4.58	□□□□□ -1.68
SSU72	YNL222W	GEX2	P36173	615 aa		4.58	□□□□□ -1.68
SSU72	YNL222W	UBP13	P38187	747 aa		4.58	□□□□□ -1.68
SSU72	YNL222W	YIL161W	P40449	235 aa	Known RBP	4.58	□□□□□ -1.68
SSU72	YNL222W	FAF1	P40546	346 aa	Predicted RBP	4.58	□□□□□ -1.68
SSU72	YNL222W	IZH1	Q03419	316 aa		4.58	□□□□□ -1.68
SSU72	YNL222W	YLR049C	Q12110	428 aa		4.58	□□□□□ -1.68
SSU72	YNL222W	ACA1	P39970	489 aa		4.57	□□□□□ -1.68
SSU72	YNL222W	TES1	P41903	349 aa	Known RBP	4.57	□□□□□ -1.68
SSU72	YNL222W	ARC35	P53731	342 aa	Known RBP	4.57	□□□□□ -1.68
SSU72	YNL222W	CAC2	Q04199	468 aa		4.57	□□□□□ -1.68
SSU72	YNL222W	SWF1	Q04629	336 aa		4.57	□□□□□ -1.68
SSU72	YNL222W	YLR455W	Q06188	304 aa		4.57	□□□□□ -1.68
SSU72	YNL222W	YFL068W	P0CX99	160 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	YLL066W-A	P0CY00	160 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	YLL067W-A	P0CY01	160 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	YCL049C	P25577	312 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	GCS1	P35197	352 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	NUP120	P35729	1037 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	MNN2	P38069	597 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	MET30	P39014	640 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	PSF2	P40359	213 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	YIL169C	P40442	995 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	DCP2	P53550	970 aa	Known RBP	4.56	□□□□□ -1.68
SSU72	YNL222W	DIG1	Q03063	452 aa	Known RBP	4.56	□□□□□ -1.68
SSU72	YNL222W	CIA1	Q05583	330 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	COX17	Q12287	69 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	PCD1	Q12524	340 aa		4.56	□□□□□ -1.68
SSU72	YNL222W	MSM1	P22438	575 aa		4.55	□□□□□ -1.68
SSU72	YNL222W	PAP2	P53632	584 aa	Known RBP	4.55	□□□□□ -1.68
SSU72	YNL222W	PFA5	Q03289	374 aa		4.55	□□□□□ -1.68
SSU72	YNL222W	CRN1	Q06440	651 aa		4.55	□□□□□ -1.68
SSU72	YNL222W	POS5	Q06892	414 aa		4.55	□□□□□ -1.68
SSU72	YNL222W	SPO16	P17122	198 aa		4.54	□□□□□ -1.68
SSU72	YNL222W	SRP54	P20424	541 aa	Known RBP	4.54	□□□□□ -1.68
SSU72	YNL222W	COG1	P53079	417 aa		4.54	□□□□□ -1.68
SSU72	YNL222W	UBX4	P54730	416 aa		4.54	□□□□□ -1.68
SSU72	YNL222W	ECM16	Q04217	1267 aa	Known RBP	4.54	□□□□□ -1.68
SSU72	YNL222W	CHO1	P08456	276 aa		4.53	□□□□□ -1.68
SSU72	YNL222W	PET111	P08468	800 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms