RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W STE2D6VTK4 431 aa3.87□□□□□ -1.79
ECM16YMR128W PMA1P05030 918 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W CYM1P32898 989 aa3.87□□□□□ -1.79
ECM16YMR128W TIF3P34167 436 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W KAP104P38217 918 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W DIM1P41819 318 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W MAF1P41910 395 aa3.87□□□□□ -1.79
ECM16YMR128W SLS1P42900 643 aa3.87□□□□□ -1.79
ECM16YMR128W ORM1P53224 222 aa3.87□□□□□ -1.79
ECM16YMR128W BCP1Q06338 283 aa3.87□□□□□ -1.79
ECM16YMR128W IWR1Q07532 353 aaPredicted RBP3.87□□□□□ -1.79
ECM16YMR128W RAD18P10862 487 aa3.87□□□□□ -1.79
ECM16YMR128W FRE1P32791 686 aa3.87□□□□□ -1.79
ECM16YMR128W MRPL16P38064 232 aa3.87□□□□□ -1.79
ECM16YMR128W TBS1P38114 1094 aa3.87□□□□□ -1.79
ECM16YMR128W ERT1P38140 529 aa3.87□□□□□ -1.79
ECM16YMR128W NPP2P39997 493 aa3.87□□□□□ -1.79
ECM16YMR128W YFL054CP43549 646 aa3.87□□□□□ -1.79
ECM16YMR128W SAD1P43589 448 aa3.87□□□□□ -1.79
ECM16YMR128W RFX1P48743 811 aa3.87□□□□□ -1.79
ECM16YMR128W MRK1P50873 501 aa3.87□□□□□ -1.79
ECM16YMR128W COG2P53271 262 aa3.87□□□□□ -1.79
ECM16YMR128W TIM11P81449 96 aaPredicted RBP3.87□□□□□ -1.79
ECM16YMR128W DUS3Q06053 668 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W ATG26Q06321 1198 aa3.87□□□□□ -1.79
ECM16YMR128W OPT2Q06593 877 aa3.87□□□□□ -1.79
ECM16YMR128W THI20Q08224 551 aa3.87□□□□□ -1.79
ECM16YMR128W TAF3Q12297 353 aa3.87□□□□□ -1.79
ECM16YMR128W EMP46Q12396 444 aa3.87□□□□□ -1.79
ECM16YMR128W YDR461C-AQ2V2P7 80 aa3.87□□□□□ -1.79
ECM16YMR128W MEI4P29467 408 aa3.86□□□□□ -1.79
ECM16YMR128W LIF1P53150 421 aa3.86□□□□□ -1.79
ECM16YMR128W SQS1P53866 767 aaKnown RBP3.86□□□□□ -1.79
ECM16YMR128W GLO2Q05584 274 aa3.86□□□□□ -1.79
ECM16YMR128W GGA1Q06336 557 aa3.86□□□□□ -1.79
ECM16YMR128W CUR1Q06469 252 aa3.86□□□□□ -1.79
ECM16YMR128W SOG2Q08817 791 aa3.86□□□□□ -1.79
ECM16YMR128W VCX1Q99385 411 aa3.86□□□□□ -1.79
ECM16YMR128W SLY1P22213 666 aa3.86□□□□□ -1.79
ECM16YMR128W CNA1P23287 553 aa3.86□□□□□ -1.79
ECM16YMR128W SPR1P32603 445 aa3.86□□□□□ -1.79
ECM16YMR128W PTC1P35182 281 aa3.86□□□□□ -1.79
ECM16YMR128W CTP1P38152 299 aa3.86□□□□□ -1.79
ECM16YMR128W TMA108P40462 946 aa3.86□□□□□ -1.79
ECM16YMR128W ASI1P54074 624 aa3.86□□□□□ -1.79
ECM16YMR128W PHM6Q05637 104 aa3.86□□□□□ -1.79
ECM16YMR128W KAP95Q06142 861 aaKnown RBP3.86□□□□□ -1.79
ECM16YMR128W ISA1Q07821 250 aaPredicted RBP3.86□□□□□ -1.79
ECM16YMR128W AAD15Q08361 143 aa3.86□□□□□ -1.79
ECM16YMR128W RRG1Q12167 365 aaPredicted RBP3.86□□□□□ -1.79
ECM16YMR128W YOR342CQ12182 319 aa3.86□□□□□ -1.79
ECM16YMR128W AVL9Q12500 764 aa3.86□□□□□ -1.79
ECM16YMR128W YMR030W-AQ3E760 96 aa3.86□□□□□ -1.79
ECM16YMR128W PRP6P19735 899 aaPredicted RBP3.86□□□□□ -1.79
ECM16YMR128W PIM1P36775 1133 aa3.86□□□□□ -1.79
ECM16YMR128W NMD3P38861 518 aaKnown RBP3.86□□□□□ -1.79
ECM16YMR128W PMC1P38929 1173 aaPredicted RBP3.86□□□□□ -1.79
ECM16YMR128W POL31P46957 487 aa3.86□□□□□ -1.79
ECM16YMR128W ASN1P49089 572 aaKnown RBP3.86□□□□□ -1.79
ECM16YMR128W CNM67P53865 581 aaKnown RBP3.86□□□□□ -1.79
ECM16YMR128W MSH5Q12175 901 aa3.86□□□□□ -1.79
ECM16YMR128W YPR089WO13585 888 aa3.85□□□□□ -1.79
ECM16YMR128W RPL4AP10664 362 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W ATR1P13090 542 aa3.85□□□□□ -1.79
ECM16YMR128W KIN82P25341 720 aa3.85□□□□□ -1.79
ECM16YMR128W AIM26P32858 118 aa3.85□□□□□ -1.79
ECM16YMR128W UGP1P32861 499 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W TYE7P33122 291 aaPredicted RBP3.85□□□□□ -1.79
ECM16YMR128W SEC31P38968 1273 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W AVT2P39981 480 aa3.85□□□□□ -1.79
ECM16YMR128W ARG2P40360 574 aa3.85□□□□□ -1.79
ECM16YMR128W RIC1P40395 1056 aa3.85□□□□□ -1.79
ECM16YMR128W CAB2P40506 365 aa3.85□□□□□ -1.79
ECM16YMR128W RPL4BP49626 362 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W UBP15P50101 1230 aa3.85□□□□□ -1.79
ECM16YMR128W REX2P54964 269 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W GPD1Q00055 391 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W YMR099CQ03161 297 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W HAS1Q03532 505 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W IES4Q08561 116 aa3.85□□□□□ -1.79
ECM16YMR128W YIG1Q08956 461 aa3.85□□□□□ -1.79
ECM16YMR128W DED1P06634 604 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W SPE1P08432 466 aa3.85□□□□□ -1.79
ECM16YMR128W GID7P25569 745 aa3.85□□□□□ -1.79
ECM16YMR128W PTP2P29461 750 aa3.85□□□□□ -1.79
ECM16YMR128W UTP11P34247 250 aaPredicted RBP3.85□□□□□ -1.79
ECM16YMR128W ATG19P35193 415 aa3.85□□□□□ -1.79
ECM16YMR128W MNN1P39106 762 aa3.85□□□□□ -1.79
ECM16YMR128W MBP1P39678 833 aa3.85□□□□□ -1.79
ECM16YMR128W LSB6P42951 607 aa3.85□□□□□ -1.79
ECM16YMR128W NUP85P46673 744 aa3.85□□□□□ -1.79
ECM16YMR128W CCT8P47079 568 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W NUP84P52891 726 aa3.85□□□□□ -1.79
ECM16YMR128W NCS6P53088 359 aa3.85□□□□□ -1.79
ECM16YMR128W LSC1P53598 329 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W KIN4Q01919 800 aa3.85□□□□□ -1.79
ECM16YMR128W INA17Q02888 182 aa3.85□□□□□ -1.79
ECM16YMR128W TVP15Q03860 143 aa3.85□□□□□ -1.79
ECM16YMR128W TSR2Q06672 205 aaKnown RBP3.85□□□□□ -1.79
ECM16YMR128W MCM21Q06675 368 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms