RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W YLL066W-AP0CY00 160 aa3.05□□□□□ -1.92
CTK3YML112W YLL067W-AP0CY01 160 aa3.05□□□□□ -1.92
CTK3YML112W PET122P10355 254 aa3.05□□□□□ -1.92
CTK3YML112W SWI4P25302 1093 aaKnown RBP3.05□□□□□ -1.92
CTK3YML112W ARP2P32381 391 aaKnown RBP3.05□□□□□ -1.92
CTK3YML112W HIS6P40545 261 aa3.05□□□□□ -1.92
CTK3YML112W MAF1P41910 395 aa3.05□□□□□ -1.92
CTK3YML112W QRI7P43122 407 aa3.05□□□□□ -1.92
CTK3YML112W YGL036WP53185 909 aaPredicted RBP3.05□□□□□ -1.92
CTK3YML112W EAF7P53911 425 aaKnown RBP3.05□□□□□ -1.92
CTK3YML112W MOT3P54785 490 aaKnown RBP3.05□□□□□ -1.92
CTK3YML112W HIM1Q06674 414 aa3.05□□□□□ -1.92
CTK3YML112W POS5Q06892 414 aa3.05□□□□□ -1.92
CTK3YML112W FRE3Q08905 711 aa3.05□□□□□ -1.92
CTK3YML112W YLR112WQ12130 139 aa3.05□□□□□ -1.92
CTK3YML112W GAL1P04385 528 aa3.04□□□□□ -1.92
CTK3YML112W PIF1P07271 859 aa3.04□□□□□ -1.92
CTK3YML112W SUI3P09064 285 aaKnown RBP3.04□□□□□ -1.92
CTK3YML112W MIS1P09440 975 aaKnown RBP3.04□□□□□ -1.92
CTK3YML112W MRP2P10663 115 aaPredicted RBP3.04□□□□□ -1.92
CTK3YML112W BIK1P11709 440 aa3.04□□□□□ -1.92
CTK3YML112W MSH1P25846 959 aa3.04□□□□□ -1.92
CTK3YML112W RFA2P26754 273 aaKnown RBP3.04□□□□□ -1.92
CTK3YML112W GCD7P32502 381 aaPredicted RBP3.04□□□□□ -1.92
CTK3YML112W YIL169CP40442 995 aa3.04□□□□□ -1.92
CTK3YML112W DJP1P40564 432 aa3.04□□□□□ -1.92
CTK3YML112W TAM41P53230 385 aa3.04□□□□□ -1.92
CTK3YML112W ADE16P54113 591 aaKnown RBP3.04□□□□□ -1.92
CTK3YML112W MET14Q02196 202 aa3.04□□□□□ -1.92
CTK3YML112W SWF1Q04629 336 aa3.04□□□□□ -1.92
CTK3YML112W EIS1Q05050 843 aaKnown RBP3.04□□□□□ -1.92
CTK3YML112W BRE1Q07457 700 aaKnown RBP3.04□□□□□ -1.92
CTK3YML112W NRT1Q08485 598 aa3.04□□□□□ -1.92
CTK3YML112W BAG7Q12128 409 aa3.04□□□□□ -1.92
CTK3YML112W CCT4P39078 528 aaKnown RBP3.03□□□□□ -1.92
CTK3YML112W PHM8P40025 321 aa3.03□□□□□ -1.92
CTK3YML112W FAF1P40546 346 aaPredicted RBP3.03□□□□□ -1.92
CTK3YML112W IMA1P53051 589 aa3.03□□□□□ -1.92
CTK3YML112W CPR6P53691 371 aaKnown RBP3.03□□□□□ -1.92
CTK3YML112W DIG1Q03063 452 aaKnown RBP3.03□□□□□ -1.92
CTK3YML112W CAC2Q04199 468 aa3.03□□□□□ -1.92
CTK3YML112W MLC2Q06580 163 aa3.03□□□□□ -1.92
CTK3YML112W ATG23Q06671 453 aa3.03□□□□□ -1.92
CTK3YML112W GRS2Q06817 618 aa3.03□□□□□ -1.92
CTK3YML112W YER145C-AA0A023PYF4 145 aa3.02□□□□□ -1.93
CTK3YML112W GPA1P08539 472 aa3.02□□□□□ -1.93
CTK3YML112W MSS18P08593 268 aa3.02□□□□□ -1.93
CTK3YML112W YML003WP0CF16 290 aa3.02□□□□□ -1.93
CTK3YML112W PCT1P13259 424 aa3.02□□□□□ -1.93
CTK3YML112W SPC72P39723 622 aa3.02□□□□□ -1.93
CTK3YML112W PCL6P40038 420 aa3.02□□□□□ -1.93
CTK3YML112W ASG1P40467 964 aa3.02□□□□□ -1.93
CTK3YML112W IZH1Q03419 316 aa3.02□□□□□ -1.93
CTK3YML112W ECM16Q04217 1267 aaKnown RBP3.02□□□□□ -1.93
CTK3YML112W YSP3P25036 478 aa3.01□□□□□ -1.93
CTK3YML112W PTP2P29461 750 aa3.01□□□□□ -1.93
CTK3YML112W TOM20P35180 183 aa3.01□□□□□ -1.93
CTK3YML112W FSH1P38777 243 aaKnown RBP3.01□□□□□ -1.93
CTK3YML112W VPS27P40343 622 aaKnown RBP3.01□□□□□ -1.93
CTK3YML112W ZAP1P47043 880 aa3.01□□□□□ -1.93
CTK3YML112W ECI1Q05871 280 aa3.01□□□□□ -1.93
CTK3YML112W STP3Q05937 343 aa3.01□□□□□ -1.93
CTK3YML112W YLR455WQ06188 304 aa3.01□□□□□ -1.93
CTK3YML112W YLR049CQ12110 428 aa3.01□□□□□ -1.93
CTK3YML112W YOR111WQ99210 232 aa3.01□□□□□ -1.93
CTK3YML112W LRE1P25579 583 aaKnown RBP3□□□□□ -1.93
CTK3YML112W GRX7P38068 203 aa3□□□□□ -1.93
CTK3YML112W MNN2P38069 597 aa3□□□□□ -1.93
CTK3YML112W RTT107P38850 1070 aa3□□□□□ -1.93
CTK3YML112W VRG4P40107 337 aa3□□□□□ -1.93
CTK3YML112W SAD1P43589 448 aa3□□□□□ -1.93
CTK3YML112W YGL260WP53056 76 aa3□□□□□ -1.93
CTK3YML112W DCP2P53550 970 aaKnown RBP3□□□□□ -1.93
CTK3YML112W BET4Q00618 327 aa3□□□□□ -1.93
CTK3YML112W ARP9Q05123 467 aa3□□□□□ -1.93
CTK3YML112W GPN2Q08726 347 aaPredicted RBP3□□□□□ -1.93
CTK3YML112W CBP1P07252 654 aa2.99□□□□□ -1.93
CTK3YML112W CLB4P24871 460 aa2.99□□□□□ -1.93
CTK3YML112W ADE17P38009 592 aaKnown RBP2.99□□□□□ -1.93
CTK3YML112W UBP13P38187 747 aa2.99□□□□□ -1.93
CTK3YML112W RKM3P38222 552 aa2.99□□□□□ -1.93
CTK3YML112W YBR138CP38277 524 aa2.99□□□□□ -1.93
CTK3YML112W PUG1P40100 303 aa2.99□□□□□ -1.93
CTK3YML112W ESBP6P53918 673 aa2.99□□□□□ -1.93
CTK3YML112W FMP42Q04991 504 aa2.99□□□□□ -1.93
CTK3YML112W YLR281CQ05863 155 aa2.99□□□□□ -1.93
CTK3YML112W SWA2Q06677 668 aa2.99□□□□□ -1.93
CTK3YML112W SWT1Q12104 458 aa2.99□□□□□ -1.93
CTK3YML112W GEX2P36173 615 aa2.98□□□□□ -1.93
CTK3YML112W EXO84P38261 753 aa2.98□□□□□ -1.93
CTK3YML112W YND1P40009 630 aa2.98□□□□□ -1.93
CTK3YML112W PSP1P50896 841 aaKnown RBP2.98□□□□□ -1.93
CTK3YML112W TRS130Q03660 1102 aa2.98□□□□□ -1.93
CTK3YML112W YMR254CQ04838 102 aa2.98□□□□□ -1.93
CTK3YML112W CHO1P08456 276 aa2.97□□□□□ -1.93
CTK3YML112W SRP54P20424 541 aaKnown RBP2.97□□□□□ -1.93
CTK3YML112W PPZ1P26570 692 aa2.97□□□□□ -1.93
CTK3YML112W NUP120P35729 1037 aa2.97□□□□□ -1.93
CTK3YML112W LEU5P38702 357 aa2.97□□□□□ -1.93
CTK3YML112W YHL041WP38730 149 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms