RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C PHO81P17442 1178 aa3.66□□□□□ -1.82
RPN13YLR421C MCM10P32354 571 aa3.66□□□□□ -1.82
RPN13YLR421C ATO2P32907 282 aa3.66□□□□□ -1.82
RPN13YLR421C FTH1P38310 465 aa3.66□□□□□ -1.82
RPN13YLR421C MDR1P53258 950 aa3.66□□□□□ -1.82
RPN13YLR421C GIS2P53849 153 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82 RIP-Chip
RPN13YLR421C ECM38Q05902 660 aaPredicted RBP3.66□□□□□ -1.82
RPN13YLR421C BUD7Q08754 746 aa3.66□□□□□ -1.82
RPN13YLR421C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
RPN13YLR421C MED1Q12321 566 aa3.66□□□□□ -1.82
RPN13YLR421C YOL114CQ12322 202 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-HO13535 1793 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-DR5P0C2I2 1755 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-DR6P0C2I3 1755 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-LR2P0C2I5 1755 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-LR3P0C2I6 1755 aaKnown RBP3.66□□□□□ -1.82
RPN13YLR421C TY1B-PR1P0C2I9 1755 aaKnown RBP3.66□□□□□ -1.82
RPN13YLR421C TY1B-PR2P0C2J0 1756 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-PR3P0C2J1 1755 aaKnown RBP3.66□□□□□ -1.82
RPN13YLR421C TY1B-JR1P47098 1755 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-ML2Q03434 1755 aaKnown RBP3.66□□□□□ -1.82
RPN13YLR421C TY1B-ER1Q03612 1755 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-ML1Q04711 1755 aaKnown RBP3.66□□□□□ -1.82
RPN13YLR421C TY1B-GR2Q12269 1755 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-OLQ12273 1755 aa3.66□□□□□ -1.82
RPN13YLR421C TY1B-PLQ12414 1755 aaKnown RBP3.66□□□□□ -1.82
RPN13YLR421C YEL076C-AP0CX16 216 aa3.65□□□□□ -1.83
RPN13YLR421C YLR464WP0CX17 216 aa3.65□□□□□ -1.83
RPN13YLR421C RPT3P33298 428 aaKnown RBP3.65□□□□□ -1.83
RPN13YLR421C RKM3P38222 552 aa3.65□□□□□ -1.83
RPN13YLR421C MTG2P38860 518 aa3.65□□□□□ -1.83
RPN13YLR421C CCT4P39078 528 aaKnown RBP3.65□□□□□ -1.83
RPN13YLR421C YEL076CP39971 216 aa3.65□□□□□ -1.83
RPN13YLR421C ESL1P40456 1118 aa3.65□□□□□ -1.83
RPN13YLR421C YML119WQ03208 357 aa3.65□□□□□ -1.83
RPN13YLR421C EIS1Q05050 843 aaKnown RBP3.65□□□□□ -1.83
RPN13YLR421C IMH1Q06704 911 aaKnown RBP3.65□□□□□ -1.83
RPN13YLR421C SRL1Q08673 210 aa3.65□□□□□ -1.83
RPN13YLR421C LSP1Q12230 341 aaKnown RBP3.65□□□□□ -1.83
RPN13YLR421C ARP7Q12406 477 aa3.65□□□□□ -1.83
RPN13YLR421C MDS3P53094 1487 aa3.65□□□□□ -1.83
RPN13YLR421C CET1O13297 549 aaPredicted RBP3.64□□□□□ -1.83
RPN13YLR421C YPT1P01123 206 aaKnown RBP3.64□□□□□ -1.83
RPN13YLR421C MAK32P23060 363 aa3.64□□□□□ -1.83
RPN13YLR421C AIM17P23180 465 aaKnown RBP3.64□□□□□ -1.83
RPN13YLR421C GFD2P25370 566 aaKnown RBP3.64□□□□□ -1.83
RPN13YLR421C SDH8P38345 138 aa3.64□□□□□ -1.83
RPN13YLR421C YAT2P40017 923 aa3.64□□□□□ -1.83
RPN13YLR421C YIR016WP40572 265 aa3.64□□□□□ -1.83
RPN13YLR421C ERR3P42222 437 aa3.64□□□□□ -1.83
RPN13YLR421C IRC5P43610 853 aa3.64□□□□□ -1.83
RPN13YLR421C SMC3P47037 1230 aa3.64□□□□□ -1.83
RPN13YLR421C MEP3P53390 489 aa3.64□□□□□ -1.83
RPN13YLR421C TEP1P53916 434 aa3.64□□□□□ -1.83
RPN13YLR421C GTR1Q00582 310 aa3.64□□□□□ -1.83
RPN13YLR421C TFC6Q06339 672 aa3.64□□□□□ -1.83
RPN13YLR421C SDH5Q08230 162 aa3.64□□□□□ -1.83
RPN13YLR421C YDR056CQ12025 205 aa3.64□□□□□ -1.83
RPN13YLR421C IQG1Q12280 1495 aa3.64□□□□□ -1.83
RPN13YLR421C RTC1Q08281 1341 aa3.64□□□□□ -1.83
RPN13YLR421C YOR093CQ12275 1648 aa3.63□□□□□ -1.83
RPN13YLR421C GAL4P04386 881 aa3.63□□□□□ -1.83
RPN13YLR421C RNA1P11745 407 aaKnown RBP3.63□□□□□ -1.83
RPN13YLR421C SUI2P20459 304 aaKnown RBP3.63□□□□□ -1.83
RPN13YLR421C RRP43P25359 394 aaPredicted RBP3.63□□□□□ -1.83
RPN13YLR421C RRN3P36070 627 aa3.63□□□□□ -1.83
RPN13YLR421C JNM1P36224 373 aa3.63□□□□□ -1.83
RPN13YLR421C PSY4P38193 441 aa3.63□□□□□ -1.83
RPN13YLR421C GND1P38720 489 aaKnown RBP3.63□□□□□ -1.83
RPN13YLR421C RAD26P40352 1085 aa3.63□□□□□ -1.83
RPN13YLR421C CIN1P40987 1014 aa3.63□□□□□ -1.83
RPN13YLR421C MDV1P47025 714 aa3.63□□□□□ -1.83
RPN13YLR421C ASK10P48361 1146 aa3.63□□□□□ -1.83
RPN13YLR421C COG2P53271 262 aa3.63□□□□□ -1.83
RPN13YLR421C HOL1P53389 586 aa3.63□□□□□ -1.83
RPN13YLR421C MTD1Q02046 320 aaKnown RBP3.63□□□□□ -1.83
RPN13YLR421C YOR389WQ08912 624 aa3.63□□□□□ -1.83
RPN13YLR421C HAP1P0CE41 1502 aa3.63□□□□□ -1.83
RPN13YLR421C TY1B-BRQ12193 1756 aa3.63□□□□□ -1.83
RPN13YLR421C TY1B-GR3Q12316 1755 aa3.63□□□□□ -1.83
RPN13YLR421C TY1B-ORQ92393 1755 aa3.63□□□□□ -1.83
RPN13YLR421C FOB1O13329 566 aa3.62□□□□□ -1.83
RPN13YLR421C ILS1P09436 1072 aaKnown RBP3.62□□□□□ -1.83
RPN13YLR421C MTF2P10849 440 aa3.62□□□□□ -1.83
RPN13YLR421C AMD2P22580 549 aa3.62□□□□□ -1.83
RPN13YLR421C ARG1P22768 420 aa3.62□□□□□ -1.83
RPN13YLR421C CWH43P25618 953 aa3.62□□□□□ -1.83
RPN13YLR421C CHS3P29465 1165 aa3.62□□□□□ -1.83
RPN13YLR421C SPC110P32380 944 aa3.62□□□□□ -1.83
RPN13YLR421C XRS2P33301 854 aa3.62□□□□□ -1.83
RPN13YLR421C SRP68P38687 599 aaKnown RBP3.62□□□□□ -1.83
RPN13YLR421C SPC72P39723 622 aa3.62□□□□□ -1.83
RPN13YLR421C SSP120P39931 234 aaKnown RBP3.62□□□□□ -1.83
RPN13YLR421C IML2P47031 731 aa3.62□□□□□ -1.83
RPN13YLR421C MOT3P54785 490 aaKnown RBP3.62□□□□□ -1.83
RPN13YLR421C UBP16Q02863 499 aa3.62□□□□□ -1.83
RPN13YLR421C BLS1Q06071 122 aa3.62□□□□□ -1.83
RPN13YLR421C TSR2Q06672 205 aaKnown RBP3.62□□□□□ -1.83
RPN13YLR421C YDL144CQ07589 356 aa3.62□□□□□ -1.83
RPN13YLR421C VPS5Q92331 675 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms