RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W ICL2Q12031 575 aa1.58□□□□□ -2.16
SMC4YLR086W USV1Q12132 391 aa1.58□□□□□ -2.16
SMC4YLR086W RPL7BQ12213 244 aaKnown RBP1.58□□□□□ -2.16
SMC4YLR086W CDC24P11433 854 aaPredicted RBP1.57□□□□□ -2.16
SMC4YLR086W SWI4P25302 1093 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W KSP1P38691 1029 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W ERC1P38767 581 aa1.57□□□□□ -2.16
SMC4YLR086W YHR097CP38809 366 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W IST1P53843 298 aaPredicted RBP1.57□□□□□ -2.16
SMC4YLR086W JJJ1P53863 590 aa1.57□□□□□ -2.16
SMC4YLR086W TAF11Q04226 346 aa1.57□□□□□ -2.16
SMC4YLR086W SNO4Q04902 237 aa1.57□□□□□ -2.16
SMC4YLR086W IRC10Q08118 586 aa1.57□□□□□ -2.16
SMC4YLR086W MCH5Q08777 521 aa1.57□□□□□ -2.16
SMC4YLR086W HSP33Q08914 237 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W HSP32Q08992 237 aa1.57□□□□□ -2.16
SMC4YLR086W PGA3Q12746 312 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W DYN1P36022 4092 aa1.57□□□□□ -2.16
SMC4YLR086W RPO31P04051 1460 aa1.57□□□□□ -2.16
SMC4YLR086W IQG1Q12280 1495 aa1.57□□□□□ -2.16
SMC4YLR086W AMD2P22580 549 aa1.57□□□□□ -2.16
SMC4YLR086W CDC15P27636 974 aa1.57□□□□□ -2.16
SMC4YLR086W HIS7P33734 552 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W SEC66P33754 206 aa1.57□□□□□ -2.16
SMC4YLR086W JNM1P36224 373 aa1.57□□□□□ -2.16
SMC4YLR086W SPP41P38904 1435 aa1.57□□□□□ -2.16
SMC4YLR086W YJR061WP40355 935 aa1.57□□□□□ -2.16
SMC4YLR086W PKP1P40530 394 aa1.57□□□□□ -2.16
SMC4YLR086W SUN4P53616 420 aa1.57□□□□□ -2.16
SMC4YLR086W NRD1P53617 575 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SMC4YLR086W FIN1Q03898 291 aa1.57□□□□□ -2.16
SMC4YLR086W SPC19Q03954 165 aa1.57□□□□□ -2.16
SMC4YLR086W RAD33Q04231 177 aa1.57□□□□□ -2.16
SMC4YLR086W HRD3Q05787 833 aa1.57□□□□□ -2.16
SMC4YLR086W LYS21Q12122 440 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W ERG27Q12452 347 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W HSP82P02829 709 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W TPK2P06245 380 aa1.57□□□□□ -2.16
SMC4YLR086W SES1P07284 462 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W DFR1P07807 211 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SMC4YLR086W GUK1P15454 187 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W SNT1P25357 1226 aa1.57□□□□□ -2.16
SMC4YLR086W SNU114P36048 1008 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W CST26P38226 397 aa1.57□□□□□ -2.16
SMC4YLR086W APD1P38281 316 aa1.57□□□□□ -2.16
SMC4YLR086W YEL020CP39994 560 aa1.57□□□□□ -2.16
SMC4YLR086W YIL161WP40449 235 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W APT1P49435 187 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W STR3P53101 465 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W CBK1P53894 756 aa1.57□□□□□ -2.16
SMC4YLR086W YAT1P80235 687 aa1.57□□□□□ -2.16
SMC4YLR086W VTC3Q02725 835 aa1.57□□□□□ -2.16
SMC4YLR086W YMR018WQ04364 514 aa1.57□□□□□ -2.16
SMC4YLR086W TMN2Q04562 672 aa1.57□□□□□ -2.16
SMC4YLR086W YER175W-AQ8TGU4 54 aa1.57□□□□□ -2.16
SMC4YLR086W LAM4P38800 1345 aa1.57□□□□□ -2.16
SMC4YLR086W PDR10P51533 1564 aa1.57□□□□□ -2.16
SMC4YLR086W ATP2P00830 511 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W TUB2P02557 457 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W PFK2P16862 959 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SMC4YLR086W OCA4P25366 362 aa1.57□□□□□ -2.16
SMC4YLR086W RAD16P31244 790 aa1.57□□□□□ -2.16
SMC4YLR086W UGP1P32861 499 aaKnown RBP1.57□□□□□ -2.16
SMC4YLR086W RGI2P40188 164 aa1.57□□□□□ -2.16
SMC4YLR086W CDC1P40986 491 aa1.57□□□□□ -2.16
SMC4YLR086W SKP2P42843 763 aa1.57□□□□□ -2.16
SMC4YLR086W YJL107CP42947 387 aa1.57□□□□□ -2.16
SMC4YLR086W BOP3P53958 396 aa1.57□□□□□ -2.16
SMC4YLR086W VPS9P54787 451 aa1.57□□□□□ -2.16
SMC4YLR086W GIS1Q03833 894 aa1.57□□□□□ -2.16
SMC4YLR086W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SMC4YLR086W TRM732Q03496 1420 aa1.56□□□□□ -2.16
SMC4YLR086W DNA2P38859 1522 aa1.56□□□□□ -2.16
SMC4YLR086W GCN4P03069 281 aa1.56□□□□□ -2.16
SMC4YLR086W TPK1P06244 397 aa1.56□□□□□ -2.16
SMC4YLR086W PMS1P14242 873 aa1.56□□□□□ -2.16
SMC4YLR086W ADH7P25377 361 aa1.56□□□□□ -2.16
SMC4YLR086W ELF1P36053 145 aa1.56□□□□□ -2.16
SMC4YLR086W YBR225WP38321 900 aa1.56□□□□□ -2.16
SMC4YLR086W YIL166CP40445 542 aa1.56□□□□□ -2.16
SMC4YLR086W YML6P51998 286 aa1.56□□□□□ -2.16
SMC4YLR086W ARE2P53629 642 aaKnown RBP1.56□□□□□ -2.16
SMC4YLR086W VPS75P53853 264 aa1.56□□□□□ -2.16
SMC4YLR086W RAD34Q06665 692 aa1.56□□□□□ -2.16
SMC4YLR086W KRS1P15180 591 aaKnown RBP1.56□□□□□ -2.16
SMC4YLR086W MET8P15807 274 aa1.56□□□□□ -2.16
SMC4YLR086W CLC1P17891 233 aa1.56□□□□□ -2.16
SMC4YLR086W ERG8P24521 451 aa1.56□□□□□ -2.16
SMC4YLR086W SGF29P25554 259 aa1.56□□□□□ -2.16
SMC4YLR086W RPS7AP26786 190 aaKnown RBP1.56□□□□□ -2.16
SMC4YLR086W GAC1P28006 793 aa1.56□□□□□ -2.16
SMC4YLR086W GCD7P32502 381 aaPredicted RBP1.56□□□□□ -2.16
SMC4YLR086W CNS1P33313 385 aa1.56□□□□□ -2.16
SMC4YLR086W NTR2P36118 322 aaPredicted RBP1.56□□□□□ -2.16
SMC4YLR086W ARO9P38840 513 aaPredicted RBP1.56□□□□□ -2.16
SMC4YLR086W CCT6P39079 546 aa1.56□□□□□ -2.16
SMC4YLR086W EXO1P39875 702 aa1.56□□□□□ -2.16
SMC4YLR086W NPR2P39923 615 aa1.56□□□□□ -2.16
SMC4YLR086W COG1P53079 417 aa1.56□□□□□ -2.16
SMC4YLR086W YGR066CP53242 292 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 77.3 ms