RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	ICL2	Q12031	575 aa		1.58	□□□□□ -2.16
SMC4	YLR086W	USV1	Q12132	391 aa		1.58	□□□□□ -2.16
SMC4	YLR086W	RPL7B	Q12213	244 aa	Known RBP	1.58	□□□□□ -2.16
SMC4	YLR086W	CDC24	P11433	854 aa	Predicted RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	SWI4	P25302	1093 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	KSP1	P38691	1029 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	ERC1	P38767	581 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	YHR097C	P38809	366 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	IST1	P53843	298 aa	Predicted RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	JJJ1	P53863	590 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	TAF11	Q04226	346 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	SNO4	Q04902	237 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	IRC10	Q08118	586 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	MCH5	Q08777	521 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	HSP33	Q08914	237 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	HSP32	Q08992	237 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	PGA3	Q12746	312 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	DYN1	P36022	4092 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	RPO31	P04051	1460 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	IQG1	Q12280	1495 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	AMD2	P22580	549 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	CDC15	P27636	974 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	HIS7	P33734	552 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	SEC66	P33754	206 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	JNM1	P36224	373 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	SPP41	P38904	1435 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	YJR061W	P40355	935 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	PKP1	P40530	394 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	SUN4	P53616	420 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	1.57	□□□□□ -2.16	not detected
SMC4	YLR086W	FIN1	Q03898	291 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	SPC19	Q03954	165 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	RAD33	Q04231	177 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	HRD3	Q05787	833 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	LYS21	Q12122	440 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	ERG27	Q12452	347 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	HSP82	P02829	709 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	TPK2	P06245	380 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	SES1	P07284	462 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	1.57	□□□□□ -2.16	not detected
SMC4	YLR086W	GUK1	P15454	187 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	SNT1	P25357	1226 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	SNU114	P36048	1008 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	CST26	P38226	397 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	APD1	P38281	316 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	YEL020C	P39994	560 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	YIL161W	P40449	235 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	APT1	P49435	187 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	STR3	P53101	465 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	CBK1	P53894	756 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	YAT1	P80235	687 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	VTC3	Q02725	835 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	YMR018W	Q04364	514 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	TMN2	Q04562	672 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	YER175W-A	Q8TGU4	54 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	LAM4	P38800	1345 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	PDR10	P51533	1564 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	ATP2	P00830	511 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	TUB2	P02557	457 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	1.57	□□□□□ -2.16	not detected
SMC4	YLR086W	OCA4	P25366	362 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	RAD16	P31244	790 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	UGP1	P32861	499 aa	Known RBP	1.57	□□□□□ -2.16
SMC4	YLR086W	RGI2	P40188	164 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	CDC1	P40986	491 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	SKP2	P42843	763 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	YJL107C	P42947	387 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	BOP3	P53958	396 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	VPS9	P54787	451 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	GIS1	Q03833	894 aa		1.57	□□□□□ -2.16
SMC4	YLR086W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	1.57	□□□□□ -2.16	not detected
SMC4	YLR086W	TRM732	Q03496	1420 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	DNA2	P38859	1522 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	GCN4	P03069	281 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	TPK1	P06244	397 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	PMS1	P14242	873 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	ADH7	P25377	361 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	ELF1	P36053	145 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	YBR225W	P38321	900 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	YIL166C	P40445	542 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	YML6	P51998	286 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	ARE2	P53629	642 aa	Known RBP	1.56	□□□□□ -2.16
SMC4	YLR086W	VPS75	P53853	264 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	RAD34	Q06665	692 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	KRS1	P15180	591 aa	Known RBP	1.56	□□□□□ -2.16
SMC4	YLR086W	MET8	P15807	274 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	CLC1	P17891	233 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	ERG8	P24521	451 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	SGF29	P25554	259 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	RPS7A	P26786	190 aa	Known RBP	1.56	□□□□□ -2.16
SMC4	YLR086W	GAC1	P28006	793 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	GCD7	P32502	381 aa	Predicted RBP	1.56	□□□□□ -2.16
SMC4	YLR086W	CNS1	P33313	385 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	NTR2	P36118	322 aa	Predicted RBP	1.56	□□□□□ -2.16
SMC4	YLR086W	ARO9	P38840	513 aa	Predicted RBP	1.56	□□□□□ -2.16
SMC4	YLR086W	CCT6	P39079	546 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	EXO1	P39875	702 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	NPR2	P39923	615 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	COG1	P53079	417 aa		1.56	□□□□□ -2.16
SMC4	YLR086W	YGR066C	P53242	292 aa		1.56	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms