RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C YML020WQ03722 664 aa4.91□□□□□ -1.62
CAF4YKR036C GAL83Q04739 417 aa4.91□□□□□ -1.62
CAF4YKR036C PEX10Q05568 337 aa4.91□□□□□ -1.62
CAF4YKR036C YLR257WQ06146 321 aaKnown RBP4.91□□□□□ -1.62
CAF4YKR036C YCS4Q06156 1176 aa4.91□□□□□ -1.62
CAF4YKR036C YLR326WQ06170 240 aaKnown RBP4.91□□□□□ -1.62
CAF4YKR036C FMP45Q07651 309 aa4.91□□□□□ -1.62
CAF4YKR036C RAX1Q08760 435 aa4.91□□□□□ -1.62
CAF4YKR036C FLC1Q08967 793 aa4.91□□□□□ -1.62
CAF4YKR036C GPM3Q12326 303 aa4.91□□□□□ -1.62
CAF4YKR036C NSI1Q12457 570 aa4.91□□□□□ -1.62
CAF4YKR036C RRD2Q12461 358 aa4.91□□□□□ -1.62
CAF4YKR036C FMP16Q12497 93 aa4.91□□□□□ -1.62
CAF4YKR036C GPM1P00950 247 aaKnown RBP4.9□□□□□ -1.62
CAF4YKR036C NFT1P0CE68 1218 aa4.9□□□□□ -1.62
CAF4YKR036C RPL8AP17076 256 aaKnown RBP4.9□□□□□ -1.62
CAF4YKR036C CKA2P19454 339 aa4.9□□□□□ -1.62
CAF4YKR036C AFT1P22149 690 aa4.9□□□□□ -1.62
CAF4YKR036C KAR4P25583 335 aa4.9□□□□□ -1.62
CAF4YKR036C VMA6P32366 345 aaKnown RBP4.9□□□□□ -1.62
CAF4YKR036C NUP2P32499 720 aa4.9□□□□□ -1.62
CAF4YKR036C PEX2P32800 271 aa4.9□□□□□ -1.62
CAF4YKR036C UGA4P32837 571 aa4.9□□□□□ -1.62
CAF4YKR036C UBP11P36026 717 aa4.9□□□□□ -1.62
CAF4YKR036C CCL1P37366 393 aa4.9□□□□□ -1.62
CAF4YKR036C ECM31P38122 312 aa4.9□□□□□ -1.62
CAF4YKR036C DUG2P38149 878 aa4.9□□□□□ -1.62
CAF4YKR036C POA1P38218 177 aa4.9□□□□□ -1.62
CAF4YKR036C SMF2P38778 549 aa4.9□□□□□ -1.62
CAF4YKR036C DMA1P38823 416 aa4.9□□□□□ -1.62
CAF4YKR036C VMA7P39111 118 aa4.9□□□□□ -1.62
CAF4YKR036C CEM1P39525 442 aa4.9□□□□□ -1.62
CAF4YKR036C MEF2P39677 819 aa4.9□□□□□ -1.62
CAF4YKR036C DDI1P40087 428 aa4.9□□□□□ -1.62
CAF4YKR036C PSY2P40164 858 aa4.9□□□□□ -1.62
CAF4YKR036C YTA12P40341 825 aa4.9□□□□□ -1.62
CAF4YKR036C YJL070CP40361 888 aa4.9□□□□□ -1.62
CAF4YKR036C ESL1P40456 1118 aa4.9□□□□□ -1.62
CAF4YKR036C MAD3P47074 515 aa4.9□□□□□ -1.62
CAF4YKR036C BPL1P48445 690 aaPredicted RBP4.9□□□□□ -1.62
CAF4YKR036C RAI1P53063 387 aaKnown RBP4.9□□□□□ -1.62
CAF4YKR036C MET13P53128 600 aa4.9□□□□□ -1.62
CAF4YKR036C RET3P53600 189 aa4.9□□□□□ -1.62
CAF4YKR036C BIO4P53630 237 aa4.9□□□□□ -1.62
CAF4YKR036C ORC4P54791 529 aa4.9□□□□□ -1.62
CAF4YKR036C CEG1Q01159 459 aaPredicted RBP4.9□□□□□ -1.62
CAF4YKR036C ADI1Q03677 179 aa4.9□□□□□ -1.62
CAF4YKR036C DLT1Q04216 342 aa4.9□□□□□ -1.62
CAF4YKR036C YMR226CQ05016 267 aaKnown RBP4.9□□□□□ -1.62
CAF4YKR036C YLR297WQ05899 129 aa4.9□□□□□ -1.62
CAF4YKR036C DSE3Q08729 430 aa4.9□□□□□ -1.62
CAF4YKR036C RRP36Q12481 300 aaPredicted RBP4.9□□□□□ -1.62
CAF4YKR036C CCP1P00431 361 aa4.89□□□□□ -1.63
CAF4YKR036C RHO1P06780 209 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C YEL076C-AP0CX16 216 aa4.89□□□□□ -1.63
CAF4YKR036C YLR464WP0CX17 216 aa4.89□□□□□ -1.63
CAF4YKR036C RAP1P11938 827 aa4.89□□□□□ -1.63
CAF4YKR036C TOP3P13099 656 aa4.89□□□□□ -1.63
CAF4YKR036C GLN4P13188 809 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C KSS1P14681 368 aa4.89□□□□□ -1.63
CAF4YKR036C RPB4P20433 221 aaPredicted RBP4.89□□□□□ -1.63
CAF4YKR036C SNT1P25357 1226 aa4.89□□□□□ -1.63
CAF4YKR036C SBA1P28707 216 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C CYS4P32582 507 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C NIC96P34077 839 aa4.89□□□□□ -1.63
CAF4YKR036C CTP1P38152 299 aa4.89□□□□□ -1.63
CAF4YKR036C STP2P38704 541 aa4.89□□□□□ -1.63
CAF4YKR036C YEL076CP39971 216 aa4.89□□□□□ -1.63
CAF4YKR036C TGL3P40308 642 aa4.89□□□□□ -1.63
CAF4YKR036C QDR2P40474 542 aa4.89□□□□□ -1.63
CAF4YKR036C MSS2P40990 351 aa4.89□□□□□ -1.63
CAF4YKR036C APS3P47064 194 aa4.89□□□□□ -1.63
CAF4YKR036C RPS7BP48164 190 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C CTR1P49573 406 aa4.89□□□□□ -1.63
CAF4YKR036C IMP4P53941 290 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C SDH1Q00711 640 aa4.89□□□□□ -1.63
CAF4YKR036C MUK1Q02866 612 aa4.89□□□□□ -1.63
CAF4YKR036C HER2Q03557 464 aa4.89□□□□□ -1.63
CAF4YKR036C ARX1Q03862 593 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C SVF1Q05515 481 aa4.89□□□□□ -1.63
CAF4YKR036C RSC2Q06488 889 aa4.89□□□□□ -1.63
CAF4YKR036C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
CAF4YKR036C THP3Q12049 470 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C YLL058WQ12198 575 aa4.89□□□□□ -1.63
CAF4YKR036C LDB17Q12342 491 aa4.89□□□□□ -1.63
CAF4YKR036C HRT3Q12347 344 aa4.89□□□□□ -1.63
CAF4YKR036C GTT2Q12390 233 aa4.89□□□□□ -1.63
CAF4YKR036C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
CAF4YKR036C PUT2P07275 575 aa4.89□□□□□ -1.63
CAF4YKR036C SFL1P20134 766 aa4.89□□□□□ -1.63
CAF4YKR036C VPS34P22543 875 aa4.89□□□□□ -1.63
CAF4YKR036C CTR86P25355 563 aa4.89□□□□□ -1.63
CAF4YKR036C OCA4P25366 362 aa4.89□□□□□ -1.63
CAF4YKR036C TRK2P28584 889 aa4.89□□□□□ -1.63
CAF4YKR036C MUD1P32605 298 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C MDJ1P35191 511 aa4.89□□□□□ -1.63
CAF4YKR036C NAT2P37293 288 aa4.89□□□□□ -1.63
CAF4YKR036C YBL036CP38197 257 aa4.89□□□□□ -1.63
CAF4YKR036C NCL1P38205 684 aaKnown RBP4.89□□□□□ -1.63
CAF4YKR036C RFS1P38234 210 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms