RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W ECM29P38737 1868 aa2.18□□□□□ -2.06
RTT107YHR154W YCK1P23291 538 aa2.18□□□□□ -2.06
RTT107YHR154W ROX1P25042 368 aa2.18□□□□□ -2.06
RTT107YHR154W AIM26P32858 118 aa2.18□□□□□ -2.06
RTT107YHR154W SSZ1P38788 538 aaKnown RBP2.18□□□□□ -2.06
RTT107YHR154W JHD1P40034 492 aa2.18□□□□□ -2.06
RTT107YHR154W LTP1P40347 161 aa2.18□□□□□ -2.06
RTT107YHR154W HXT16P47185 567 aa2.18□□□□□ -2.06
RTT107YHR154W MRX6P48564 524 aa2.18□□□□□ -2.06
RTT107YHR154W ARE2P53629 642 aaKnown RBP2.18□□□□□ -2.06
RTT107YHR154W VPS75P53853 264 aa2.18□□□□□ -2.06
RTT107YHR154W NUS1Q12063 375 aa2.18□□□□□ -2.06
RTT107YHR154W TOR2P32600 2474 aaKnown RBP2.18□□□□□ -2.06
RTT107YHR154W HIP1P06775 603 aa2.18□□□□□ -2.06
RTT107YHR154W YML002WP0CF17 737 aa2.18□□□□□ -2.06
RTT107YHR154W PYC1P11154 1178 aaKnown RBP2.18□□□□□ -2.06
RTT107YHR154W SEC12P11655 471 aa2.18□□□□□ -2.06
RTT107YHR154W CLB1P24868 471 aa2.18□□□□□ -2.06
RTT107YHR154W ERG3P32353 365 aa2.18□□□□□ -2.06
RTT107YHR154W SSE1P32589 693 aaKnown RBP2.18□□□□□ -2.06
RTT107YHR154W RIB7P33312 244 aa2.18□□□□□ -2.06
RTT107YHR154W YHR097CP38809 366 aaKnown RBP2.18□□□□□ -2.06
RTT107YHR154W KEL1P38853 1164 aaKnown RBP2.18□□□□□ -2.06
RTT107YHR154W UTP9P38882 575 aaKnown RBP2.18□□□□□ -2.06
RTT107YHR154W PSD1P39006 500 aa2.18□□□□□ -2.06
RTT107YHR154W VFA1P40080 203 aa2.18□□□□□ -2.06
RTT107YHR154W GSM1P42950 618 aa2.18□□□□□ -2.06
RTT107YHR154W MNP1P53163 194 aaPredicted RBP2.18□□□□□ -2.06
RTT107YHR154W ARP4P80428 489 aa2.18□□□□□ -2.06
RTT107YHR154W YPL107WQ02873 248 aa2.18□□□□□ -2.06
RTT107YHR154W YDR239CQ03780 787 aa2.18□□□□□ -2.06
RTT107YHR154W VPS64Q03944 604 aa2.18□□□□□ -2.06
RTT107YHR154W YPS7Q06325 596 aa2.18□□□□□ -2.06
RTT107YHR154W XYL2Q07993 356 aa2.18□□□□□ -2.06
RTT107YHR154W ATP2P00830 511 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W URA3P03962 267 aa2.17□□□□□ -2.06
RTT107YHR154W RPL40AP0CH08 128 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W RPL40BP0CH09 128 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W CDC26P14724 124 aa2.17□□□□□ -2.06
RTT107YHR154W VMA2P16140 517 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W PRP28P23394 588 aa2.17□□□□□ -2.06
RTT107YHR154W LCB1P25045 558 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W OCA4P25366 362 aa2.17□□□□□ -2.06
RTT107YHR154W RRP7P25368 297 aaPredicted RBP2.17□□□□□ -2.06
RTT107YHR154W RGT1P32862 1170 aa2.17□□□□□ -2.06
RTT107YHR154W UBP11P36026 717 aa2.17□□□□□ -2.06
RTT107YHR154W STB5P38699 743 aa2.17□□□□□ -2.06
RTT107YHR154W FSH1P38777 243 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W SPL2P38839 148 aa2.17□□□□□ -2.06
RTT107YHR154W YNL195CP40168 261 aa2.17□□□□□ -2.06
RTT107YHR154W DJP1P40564 432 aa2.17□□□□□ -2.06
RTT107YHR154W PXA1P41909 870 aa2.17□□□□□ -2.06
RTT107YHR154W YJR039WP47107 1121 aa2.17□□□□□ -2.06
RTT107YHR154W TAF4P50105 388 aa2.17□□□□□ -2.06
RTT107YHR154W HFM1P51979 1187 aa2.17□□□□□ -2.06
RTT107YHR154W ALT1P52893 592 aa2.17□□□□□ -2.06
RTT107YHR154W YNL058CP53947 316 aa2.17□□□□□ -2.06
RTT107YHR154W FMP45Q07651 309 aa2.17□□□□□ -2.06
RTT107YHR154W PUS7Q08647 676 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W YPL191CQ08930 360 aa2.17□□□□□ -2.06
RTT107YHR154W RVB2Q12464 471 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W PFK27Q12471 397 aaPredicted RBP2.17□□□□□ -2.06
RTT107YHR154W SEC39Q12745 709 aa2.17□□□□□ -2.06
RTT107YHR154W AFI1Q99222 893 aa2.17□□□□□ -2.06
RTT107YHR154W VPS13Q07878 3144 aa2.17□□□□□ -2.06
RTT107YHR154W DUR1,2P32528 1835 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W TUB2P02557 457 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W OLE1P21147 510 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W MSP1P28737 362 aa2.17□□□□□ -2.06
RTT107YHR154W SAC6P32599 642 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W YKR073CP36153 106 aa2.17□□□□□ -2.06
RTT107YHR154W APT2P36973 181 aa2.17□□□□□ -2.06
RTT107YHR154W YHL012WP38709 493 aa2.17□□□□□ -2.06
RTT107YHR154W YHR054CP38780 354 aa2.17□□□□□ -2.06
RTT107YHR154W WSS1P38838 269 aa2.17□□□□□ -2.06
RTT107YHR154W YHR218WP38899 603 aa2.17□□□□□ -2.06
RTT107YHR154W RPN3P40016 523 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W YNR071CP53757 342 aa2.17□□□□□ -2.06
RTT107YHR154W YPL108WQ02872 168 aaPredicted RBP2.17□□□□□ -2.06
RTT107YHR154W NGL3Q03210 505 aa2.17□□□□□ -2.06
RTT107YHR154W DPB4Q04603 196 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W STP3Q05937 343 aa2.17□□□□□ -2.06
RTT107YHR154W TCO89Q08921 799 aa2.17□□□□□ -2.06
RTT107YHR154W AIM41Q12032 185 aa2.17□□□□□ -2.06
RTT107YHR154W YLL058WQ12198 575 aa2.17□□□□□ -2.06
RTT107YHR154W GPM3Q12326 303 aa2.17□□□□□ -2.06
RTT107YHR154W CTF3Q12748 733 aa2.17□□□□□ -2.06
RTT107YHR154W TRP3P00937 484 aa2.17□□□□□ -2.06
RTT107YHR154W MDH1P17505 334 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
RTT107YHR154W SNF5P18480 905 aa2.17□□□□□ -2.06
RTT107YHR154W SRO9P25567 434 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W ALY1P36117 915 aa2.17□□□□□ -2.06
RTT107YHR154W KAE1P36132 386 aa2.17□□□□□ -2.06
RTT107YHR154W MUP3P38734 546 aa2.17□□□□□ -2.06
RTT107YHR154W MTG2P38860 518 aa2.17□□□□□ -2.06
RTT107YHR154W BEM4P39011 633 aa2.17□□□□□ -2.06
RTT107YHR154W SSP120P39931 234 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W LSM5P40089 93 aaKnown RBP2.17□□□□□ -2.06
RTT107YHR154W TEL2P53038 688 aa2.17□□□□□ -2.06
RTT107YHR154W LEE1Q02799 301 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms