RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W MRPL7P36519 292 aa7.58□□□□□ -1.2
PEX28YHR150W FIR1P40020 876 aa7.58□□□□□ -1.2
PEX28YHR150W CNN1P43618 361 aa7.58□□□□□ -1.2
PEX28YHR150W TRF5P48561 642 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W CUS2P53830 285 aaPredicted RBP7.58□□□□□ -1.2
PEX28YHR150W YMR155WQ03795 547 aa7.58□□□□□ -1.2
PEX28YHR150W SPG3Q04398 127 aaPredicted RBP7.58□□□□□ -1.2
PEX28YHR150W ARP9Q05123 467 aa7.58□□□□□ -1.2
PEX28YHR150W NSE1Q07913 336 aa7.58□□□□□ -1.2
PEX28YHR150W HAP2P06774 265 aa7.58□□□□□ -1.2
PEX28YHR150W HSP60P19882 572 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W SEC15P22224 910 aa7.58□□□□□ -1.2
PEX28YHR150W AMD2P22580 549 aa7.58□□□□□ -1.2
PEX28YHR150W RIM1P32445 135 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W RIM4P38741 713 aa7.58□□□□□ -1.2
PEX28YHR150W YHI9P38765 294 aa7.58□□□□□ -1.2
PEX28YHR150W CCT7P42943 550 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W GCN20P43535 752 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W FMP32P43557 207 aa7.58□□□□□ -1.2
PEX28YHR150W GUF1P46943 645 aa7.58□□□□□ -1.2
PEX28YHR150W MTD1Q02046 320 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W SKI8Q02793 397 aaPredicted RBP7.58□□□□□ -1.2
PEX28YHR150W NAN1Q02931 896 aaKnown RBP7.58□□□□□ -1.2
PEX28YHR150W RSC2Q06488 889 aa7.58□□□□□ -1.2
PEX28YHR150W YDL073WQ07454 984 aa7.58□□□□□ -1.2
PEX28YHR150W SLD7Q08457 257 aa7.58□□□□□ -1.2
PEX28YHR150W GET4Q12125 312 aa7.58□□□□□ -1.2
PEX28YHR150W COX6P00427 148 aa7.57□□□□□ -1.2
PEX28YHR150W SUI3P09064 285 aaKnown RBP7.57□□□□□ -1.2
PEX28YHR150W STE6P12866 1290 aa7.57□□□□□ -1.2
PEX28YHR150W ATR1P13090 542 aa7.57□□□□□ -1.2
PEX28YHR150W HSP26P15992 214 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
PEX28YHR150W ADY2P25613 283 aa7.57□□□□□ -1.2
PEX28YHR150W NDI1P32340 513 aa7.57□□□□□ -1.2
PEX28YHR150W PTC1P35182 281 aa7.57□□□□□ -1.2
PEX28YHR150W YBR056WP38081 501 aa7.57□□□□□ -1.2
PEX28YHR150W GIP1P38229 639 aa7.57□□□□□ -1.2
PEX28YHR150W RAD55P38953 406 aa7.57□□□□□ -1.2
PEX28YHR150W PRM9P39551 298 aa7.57□□□□□ -1.2
PEX28YHR150W MEF2P39677 819 aa7.57□□□□□ -1.2
PEX28YHR150W PRM2P40534 656 aa7.57□□□□□ -1.2
PEX28YHR150W RSC8P43609 557 aaKnown RBP7.57□□□□□ -1.2
PEX28YHR150W SPO74P45819 413 aa7.57□□□□□ -1.2
PEX28YHR150W YGL108CP53139 140 aa7.57□□□□□ -1.2
PEX28YHR150W GLO2Q05584 274 aa7.57□□□□□ -1.2
PEX28YHR150W HRD3Q05787 833 aa7.57□□□□□ -1.2
PEX28YHR150W SPE3Q12074 293 aaKnown RBP7.57□□□□□ -1.2
PEX28YHR150W LDB19Q12502 818 aa7.57□□□□□ -1.2
PEX28YHR150W SPE1P08432 466 aa7.56□□□□□ -1.2
PEX28YHR150W MET16P18408 261 aaPredicted RBP7.56□□□□□ -1.2
PEX28YHR150W SPC42P36094 363 aa7.56□□□□□ -1.2
PEX28YHR150W SRP68P38687 599 aaKnown RBP7.56□□□□□ -1.2
PEX28YHR150W BNA3P47039 444 aaKnown RBP7.56□□□□□ -1.2
PEX28YHR150W AIF1P52923 378 aa7.56□□□□□ -1.2
PEX28YHR150W DYN3Q04949 312 aa7.56□□□□□ -1.2
PEX28YHR150W SEM1O94742 89 aa7.55□□□□□ -1.2
PEX28YHR150W INO1P11986 533 aa7.55□□□□□ -1.2
PEX28YHR150W SEC63P14906 663 aa7.55□□□□□ -1.2
PEX28YHR150W YIH1P25637 258 aa7.55□□□□□ -1.2
PEX28YHR150W MSH2P25847 964 aa7.55□□□□□ -1.2
PEX28YHR150W ADK2P26364 225 aa7.55□□□□□ -1.2
PEX28YHR150W SMI1P32566 505 aa7.55□□□□□ -1.2
PEX28YHR150W PEP12P32854 288 aa7.55□□□□□ -1.2
PEX28YHR150W BEM3P32873 1128 aa7.55□□□□□ -1.2
PEX28YHR150W SEC66P33754 206 aa7.55□□□□□ -1.2
PEX28YHR150W LHS1P36016 881 aa7.55□□□□□ -1.2
PEX28YHR150W FSH1P38777 243 aaKnown RBP7.55□□□□□ -1.2
PEX28YHR150W YHR182WP38870 785 aa7.55□□□□□ -1.2
PEX28YHR150W YHR202WP38887 602 aa7.55□□□□□ -1.2
PEX28YHR150W VMA13P41807 478 aaKnown RBP7.55□□□□□ -1.2
PEX28YHR150W YNL058CP53947 316 aa7.55□□□□□ -1.2
PEX28YHR150W YDR179W-AQ03983 463 aa7.55□□□□□ -1.2
PEX28YHR150W JIP5Q06214 492 aaPredicted RBP7.55□□□□□ -1.2
PEX28YHR150W BUD20Q08004 166 aaPredicted RBP7.55□□□□□ -1.2
PEX28YHR150W HIS1P00498 297 aaKnown RBP7.55□□□□□ -1.2
PEX28YHR150W ATP12P22135 325 aa7.55□□□□□ -1.2
PEX28YHR150W AEP1P32493 518 aa7.55□□□□□ -1.2
PEX28YHR150W YEL028WP39989 153 aa7.55□□□□□ -1.2
PEX28YHR150W CAB2P40506 365 aa7.55□□□□□ -1.2
PEX28YHR150W SNL1P40548 159 aa7.55□□□□□ -1.2
PEX28YHR150W RPS10BP46784 105 aaKnown RBP7.55□□□□□ -1.2
PEX28YHR150W YJL132WP47014 750 aa7.55□□□□□ -1.2
PEX28YHR150W TMA20P89886 181 aaPredicted RBP7.55□□□□□ -1.2
PEX28YHR150W YPL062WQ02781 134 aa7.55□□□□□ -1.2
PEX28YHR150W NHX1Q04121 633 aa7.55□□□□□ -1.2
PEX28YHR150W HPT1Q04178 221 aaKnown RBP7.55□□□□□ -1.2
PEX28YHR150W ARA2Q04212 335 aa7.55□□□□□ -1.2
PEX28YHR150W RPS10AQ08745 105 aaPredicted RBP7.55□□□□□ -1.2
PEX28YHR150W HSH49Q99181 213 aaPredicted RBP7.55□□□□□ -1.2
PEX28YHR150W APE1P14904 514 aa7.54□□□□□ -1.2
PEX28YHR150W ART10P18634 518 aaKnown RBP7.54□□□□□ -1.2
PEX28YHR150W MRS6P32864 603 aaKnown RBP7.54□□□□□ -1.2
PEX28YHR150W SRP101P32916 621 aa7.54□□□□□ -1.2
PEX28YHR150W RPS0BP46654 252 aaKnown RBP7.54□□□□□ -1.2
PEX28YHR150W NRD1P53617 575 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
PEX28YHR150W COP1P53622 1201 aaKnown RBP7.54□□□□□ -1.2
PEX28YHR150W YNL010WP53981 241 aaKnown RBP7.54□□□□□ -1.2
PEX28YHR150W SEC10Q06245 871 aa7.54□□□□□ -1.2
PEX28YHR150W PMT7Q06644 662 aa7.54□□□□□ -1.2
PEX28YHR150W YEH2Q07950 538 aa7.54□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms