RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	RRP43	P25359	394 aa	Predicted RBP	4.57	□□□□□ -1.68
VMA22	YHR060W	FEN2	P25621	512 aa	Known RBP	4.57	□□□□□ -1.68
VMA22	YHR060W	PAP1	P29468	568 aa	Known RBP	4.57	□□□□□ -1.68
VMA22	YHR060W	PRE2	P30656	287 aa	Known RBP	4.57	□□□□□ -1.68
VMA22	YHR060W	STB6	P36085	766 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	AUR1	P36107	401 aa	Predicted RBP	4.57	□□□□□ -1.68
VMA22	YHR060W	SRO77	P38163	1010 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	LYS9	P38999	446 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	PSD1	P39006	500 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	GET2	P40056	285 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	MET28	P40573	187 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	AMA1	P50082	593 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	MCM6	P53091	1017 aa	Known RBP	4.57	□□□□□ -1.68
VMA22	YHR060W	CTF4	Q01454	927 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	GYL1	Q04322	720 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	ECM22	Q05958	814 aa	Predicted RBP	4.57	□□□□□ -1.68
VMA22	YHR060W	YLR345W	Q06137	509 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	TMA10	Q06177	86 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	SKG3	Q06315	1026 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	YEH1	Q07804	573 aa		4.57	□□□□□ -1.68
VMA22	YHR060W	CPA2	P03965	1118 aa	Known RBP	4.56	□□□□□ -1.68
VMA22	YHR060W	LAT1	P12695	482 aa	Known RBP	4.56	□□□□□ -1.68
VMA22	YHR060W	ERG6	P25087	383 aa	Known RBP	4.56	□□□□□ -1.68
VMA22	YHR060W	LRE1	P25579	583 aa	Known RBP	4.56	□□□□□ -1.68
VMA22	YHR060W	YCR015C	P25616	317 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	YCR051W	P25631	222 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	YCR061W	P25639	631 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	CAP1	P28495	268 aa	Known RBP	4.56	□□□□□ -1.68
VMA22	YHR060W	MGM1	P32266	881 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	MAL33	P38157	468 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	NUP60	P39705	539 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	GIP4	P39732	760 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	TMN3	P40071	706 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	YIR042C	P40586	236 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	LCB2	P40970	561 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	VID30	P53076	958 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	YGR054W	P53235	642 aa	Known RBP	4.56	□□□□□ -1.68
VMA22	YHR060W	SEC5	P89102	971 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	OAZ1	Q02803	292 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	BUD22	Q04347	519 aa	Known RBP	4.56	□□□□□ -1.68
VMA22	YHR060W	GTB1	Q04924	702 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	CRF1	Q04930	467 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	HOF1	Q05080	669 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	ARR3	Q06598	404 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	YBR255C-A	Q3E776	120 aa		4.56	□□□□□ -1.68
VMA22	YHR060W	PNO1	Q99216	274 aa	Known RBP	4.56	□□□□□ -1.68
VMA22	YHR060W	POL4	P25615	582 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	YIH1	P25637	258 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	URK1	P27515	501 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	CTS1	P29029	562 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	SRB5	P32585	307 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	BCS1	P32839	456 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	UBP13	P38187	747 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	CST26	P38226	397 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	FTH1	P38310	465 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	JHD1	P40034	492 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	MEP1	P40260	492 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	LTP1	P40347	161 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	BAP3	P41815	604 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	IME4	P41833	600 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	ZIM17	P42844	174 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	SAE2	P46946	345 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	FYV8	P46949	817 aa	Known RBP	4.55	□□□□□ -1.68
VMA22	YHR060W	MTL1	P53214	551 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	TAM41	P53230	385 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	INN1	P53901	409 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	YML037C	Q03703	340 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	ENB1	Q08299	606 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	ATG29	Q12092	213 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	CHS5	Q12114	671 aa	Known RBP	4.55	□□□□□ -1.68
VMA22	YHR060W	SKS1	Q12505	502 aa		4.55	□□□□□ -1.68
VMA22	YHR060W	MET3	P08536	511 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	KAR3	P17119	729 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	SUI2	P20459	304 aa	Known RBP	4.54	□□□□□ -1.68
VMA22	YHR060W	CPR2	P23285	205 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	CAD1	P24813	409 aa	Known RBP	4.54	□□□□□ -1.68
VMA22	YHR060W	TFB1	P32776	642 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	GDT1	P38301	280 aa	Predicted RBP	4.54	□□□□□ -1.68
VMA22	YHR060W	ERC1	P38767	581 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	YNG2	P38806	282 aa	Known RBP	4.54	□□□□□ -1.68
VMA22	YHR060W	AFG3	P39925	761 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	THI6	P41835	540 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	STR3	P53101	465 aa	Known RBP	4.54	□□□□□ -1.68
VMA22	YHR060W	VTI1	Q04338	217 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	RQC1	Q05468	723 aa	Known RBP	4.54	□□□□□ -1.68
VMA22	YHR060W	AVL9	Q12500	764 aa		4.54	□□□□□ -1.68
VMA22	YHR060W	ABF1	P14164	731 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	VMA16	P23968	213 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	HCM1	P25364	564 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	SPB1	P25582	841 aa	Predicted RBP	4.53	□□□□□ -1.68
VMA22	YHR060W	SYN8	P31377	255 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	MVD1	P32377	396 aa	Known RBP	4.53	□□□□□ -1.68
VMA22	YHR060W	CMC1	P36064	111 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	UIP5	P36137	443 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	SDH8	P38345	138 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	REV7	P38927	245 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	TIF4631	P39935	952 aa	Known RBP	4.53	□□□□□ -1.68
VMA22	YHR060W	YEL057C	P39983	233 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	DOT5	P40553	215 aa		4.53	□□□□□ -1.68
VMA22	YHR060W	FKH2	P41813	862 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms