RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	NMD5	P46970	1048 aa		2.35	□□□□□ -2.03
DOT6	YER088C	YJL043W	P47053	257 aa		2.35	□□□□□ -2.03
DOT6	YER088C	NPA3	P47122	385 aa		2.35	□□□□□ -2.03
DOT6	YER088C	IMD3	P50095	523 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	ARC35	P53731	342 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	PLM2	Q04383	521 aa		2.35	□□□□□ -2.03
DOT6	YER088C	BSP1	Q06604	576 aa		2.35	□□□□□ -2.03
DOT6	YER088C	PNO1	Q99216	274 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	CFT1	Q06632	1357 aa	Known RBP	2.35	□□□□□ -2.03
DOT6	YER088C	MSH1	P25846	959 aa		2.34	□□□□□ -2.03
DOT6	YER088C	URK1	P27515	501 aa		2.34	□□□□□ -2.03
DOT6	YER088C	ARP2	P32381	391 aa	Known RBP	2.34	□□□□□ -2.03
DOT6	YER088C	GSH1	P32477	678 aa		2.34	□□□□□ -2.03
DOT6	YER088C	APD1	P38281	316 aa		2.34	□□□□□ -2.03
DOT6	YER088C	LAS21	P40367	830 aa		2.34	□□□□□ -2.03
DOT6	YER088C	CAB2	P40506	365 aa		2.34	□□□□□ -2.03
DOT6	YER088C	BPL1	P48445	690 aa	Predicted RBP	2.34	□□□□□ -2.03
DOT6	YER088C	COG2	P53271	262 aa		2.34	□□□□□ -2.03
DOT6	YER088C	PAP2	P53632	584 aa	Known RBP	2.34	□□□□□ -2.03
DOT6	YER088C	YML053C	Q04978	212 aa		2.34	□□□□□ -2.03
DOT6	YER088C	RTC1	Q08281	1341 aa		2.34	□□□□□ -2.04
DOT6	YER088C	RRP5	Q05022	1729 aa	Known RBP	2.34	□□□□□ -2.04
DOT6	YER088C	MSM1	P22438	575 aa		2.34	□□□□□ -2.04
DOT6	YER088C	MTG2	P38860	518 aa		2.34	□□□□□ -2.04
DOT6	YER088C	TAN1	P53072	289 aa	Predicted RBP	2.34	□□□□□ -2.04
DOT6	YER088C	ATP23	P53722	227 aa		2.34	□□□□□ -2.04
DOT6	YER088C	YAT1	P80235	687 aa		2.34	□□□□□ -2.04
DOT6	YER088C	ARA2	Q04212	335 aa		2.34	□□□□□ -2.04
DOT6	YER088C	YPL191C	Q08930	360 aa		2.34	□□□□□ -2.04
DOT6	YER088C	EDE1	P34216	1381 aa		2.34	□□□□□ -2.04
DOT6	YER088C	CET1	O13297	549 aa	Predicted RBP	2.33	□□□□□ -2.04
DOT6	YER088C	YPT1	P01123	206 aa	Known RBP	2.33	□□□□□ -2.04
DOT6	YER088C	NUP1	P20676	1076 aa		2.33	□□□□□ -2.04
DOT6	YER088C	YCL049C	P25577	312 aa		2.33	□□□□□ -2.04
DOT6	YER088C	ECM32	P32644	1121 aa	Known RBP	2.33	□□□□□ -2.04
DOT6	YER088C	HES1	P35843	434 aa		2.33	□□□□□ -2.04
DOT6	YER088C	VBA2	P38358	474 aa	Known RBP	2.33	□□□□□ -2.04
DOT6	YER088C	ERV46	P39727	415 aa		2.33	□□□□□ -2.04
DOT6	YER088C	CIN1	P40987	1014 aa		2.33	□□□□□ -2.04
DOT6	YER088C	ERR3	P42222	437 aa		2.33	□□□□□ -2.04
DOT6	YER088C	CIR1	P42940	261 aa		2.33	□□□□□ -2.04
DOT6	YER088C	RSC9	Q03124	581 aa		2.33	□□□□□ -2.04
DOT6	YER088C	GTB1	Q04924	702 aa		2.33	□□□□□ -2.04
DOT6	YER088C	VAM6	Q07468	1049 aa		2.33	□□□□□ -2.04
DOT6	YER088C	LYS21	Q12122	440 aa	Known RBP	2.33	□□□□□ -2.04
DOT6	YER088C	GCN2	P15442	1659 aa		2.33	□□□□□ -2.04
DOT6	YER088C	MIS1	P09440	975 aa	Known RBP	2.32	□□□□□ -2.04
DOT6	YER088C	PET122	P10355	254 aa		2.32	□□□□□ -2.04
DOT6	YER088C	MTF2	P10849	440 aa		2.32	□□□□□ -2.04
DOT6	YER088C	PCT1	P13259	424 aa		2.32	□□□□□ -2.04
DOT6	YER088C	PDE1	P22434	369 aa		2.32	□□□□□ -2.04
DOT6	YER088C	YSP3	P25036	478 aa		2.32	□□□□□ -2.04
DOT6	YER088C	DBF20	P32328	564 aa		2.32	□□□□□ -2.04
DOT6	YER088C	BEM3	P32873	1128 aa		2.32	□□□□□ -2.04
DOT6	YER088C	EXO84	P38261	753 aa		2.32	□□□□□ -2.04
DOT6	YER088C	FTH1	P38310	465 aa		2.32	□□□□□ -2.04
DOT6	YER088C	FSH1	P38777	243 aa	Known RBP	2.32	□□□□□ -2.04
DOT6	YER088C	LTP1	P40347	161 aa		2.32	□□□□□ -2.04
DOT6	YER088C	CDC1	P40986	491 aa		2.32	□□□□□ -2.04
DOT6	YER088C	BNA1	P47096	177 aa		2.32	□□□□□ -2.04
DOT6	YER088C	YPL108W	Q02872	168 aa	Predicted RBP	2.32	□□□□□ -2.04
DOT6	YER088C	ENT1	Q12518	454 aa		2.32	□□□□□ -2.04
DOT6	YER088C	YML003W	P0CF16	290 aa		2.32	□□□□□ -2.04
DOT6	YER088C	CLB4	P24871	460 aa		2.32	□□□□□ -2.04
DOT6	YER088C	MSY1	P48527	492 aa		2.32	□□□□□ -2.04
DOT6	YER088C	YGR079W	P53249	370 aa		2.32	□□□□□ -2.04
DOT6	YER088C	ATG21	Q02887	496 aa		2.32	□□□□□ -2.04
DOT6	YER088C	IMH1	Q06704	911 aa	Known RBP	2.32	□□□□□ -2.04
DOT6	YER088C	NUP192	P47054	1683 aa		2.31	□□□□□ -2.04
DOT6	YER088C	COX1	P00401	534 aa		2.31	□□□□□ -2.04
DOT6	YER088C	YMR085W	P0CF18	432 aa		2.31	□□□□□ -2.04
DOT6	YER088C	RPF2	P36160	344 aa	Known RBP	2.31	□□□□□ -2.04
DOT6	YER088C	VPS27	P40343	622 aa	Known RBP	2.31	□□□□□ -2.04
DOT6	YER088C	ULP2	P40537	1034 aa	Predicted RBP	2.31	□□□□□ -2.04
DOT6	YER088C	RRT6	P53117	311 aa	Predicted RBP	2.31	□□□□□ -2.04
DOT6	YER088C	TRS130	Q03660	1102 aa		2.31	□□□□□ -2.04
DOT6	YER088C	STP3	Q05937	343 aa		2.31	□□□□□ -2.04
DOT6	YER088C	IRC3	Q06683	689 aa		2.31	□□□□□ -2.04
DOT6	YER088C	PHO81	P17442	1178 aa		2.3	□□□□□ -2.04
DOT6	YER088C	LRE1	P25579	583 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	PTC6	P25646	442 aa		2.3	□□□□□ -2.04
DOT6	YER088C	VPS24	P36095	224 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	IFA38	P38286	347 aa		2.3	□□□□□ -2.04
DOT6	YER088C	NPR3	P38742	1146 aa		2.3	□□□□□ -2.04
DOT6	YER088C	LNP1	P38878	278 aa		2.3	□□□□□ -2.04
DOT6	YER088C	XBP1	P40489	647 aa		2.3	□□□□□ -2.04
DOT6	YER088C	YPR003C	P53394	754 aa		2.3	□□□□□ -2.04
DOT6	YER088C	CSL4	P53859	292 aa	Predicted RBP	2.3	□□□□□ -2.04
DOT6	YER088C	IDP3	P53982	420 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	TPO3	Q06451	622 aa		2.3	□□□□□ -2.04
DOT6	YER088C	BUD21	Q08492	214 aa	Predicted RBP	2.3	□□□□□ -2.04
DOT6	YER088C	RVB2	Q12464	471 aa	Known RBP	2.3	□□□□□ -2.04
DOT6	YER088C	PCD1	Q12524	340 aa		2.3	□□□□□ -2.04
DOT6	YER088C	GAL4	P04386	881 aa		2.3	□□□□□ -2.04
DOT6	YER088C	YER190C-B	P0CX94	160 aa		2.3	□□□□□ -2.04
DOT6	YER088C	YEL077W-A	P0CX95	160 aa		2.3	□□□□□ -2.04
DOT6	YER088C	YGR296C-B	P0CX96	160 aa		2.3	□□□□□ -2.04
DOT6	YER088C	YPL283W-B	P0CX97	160 aa		2.3	□□□□□ -2.04
DOT6	YER088C	YPR204C-A	P0CX98	160 aa		2.3	□□□□□ -2.04
DOT6	YER088C	UBC1	P21734	215 aa	Known RBP	2.3	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 106.4 ms