RNA–Protein interactions for RNA: YER011W

TIR1, Transcript of Cell wall mannoprotein, yeast

Gene TIR1, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR1	YER011W	SAP4	P53036	818 aa		13.68	□□□□□ -0.22
TIR1	YER011W	MNT2	P53059	558 aa		13.68	□□□□□ -0.22
TIR1	YER011W	USA1	Q03714	838 aa		13.68	□□□□□ -0.22
TIR1	YER011W	NHX1	Q04121	633 aa		13.68	□□□□□ -0.22
TIR1	YER011W	BUD20	Q08004	166 aa	Predicted RBP	13.68	□□□□□ -0.22
TIR1	YER011W	INO1	P11986	533 aa		13.67	□□□□□ -0.22
TIR1	YER011W	AMS1	P22855	1083 aa		13.67	□□□□□ -0.22
TIR1	YER011W	GUT1	P32190	709 aa		13.67	□□□□□ -0.22
TIR1	YER011W	SCD5	P34758	872 aa		13.67	□□□□□ -0.22
TIR1	YER011W	PXA1	P41909	870 aa		13.67	□□□□□ -0.22
TIR1	YER011W	CSN12	P47130	423 aa		13.67	□□□□□ -0.22
TIR1	YER011W	EMC4	P53073	190 aa		13.67	□□□□□ -0.22
TIR1	YER011W	PEX13	P80667	386 aa		13.67	□□□□□ -0.22
TIR1	YER011W	GSF2	Q04697	403 aa	Known RBP	13.67	□□□□□ -0.22
TIR1	YER011W	ILV2	P07342	687 aa	Known RBP	13.66	□□□□□ -0.22
TIR1	YER011W	ERG20	P08524	352 aa	Known RBP	13.66	□□□□□ -0.22
TIR1	YER011W	EMC1	P25574	760 aa		13.66	□□□□□ -0.22
TIR1	YER011W	CSE1	P33307	960 aa		13.66	□□□□□ -0.22
TIR1	YER011W	CTF13	P35203	478 aa		13.66	□□□□□ -0.22
TIR1	YER011W	MRP21	P38175	177 aa		13.66	□□□□□ -0.22
TIR1	YER011W	GDH3	P39708	457 aa		13.66	□□□□□ -0.22
TIR1	YER011W	SEO1	P39709	593 aa		13.66	□□□□□ -0.22
TIR1	YER011W	GLG2	P47011	380 aa		13.66	□□□□□ -0.22
TIR1	YER011W	COG1	P53079	417 aa		13.66	□□□□□ -0.22
TIR1	YER011W	SPC105	P53148	917 aa		13.66	□□□□□ -0.22
TIR1	YER011W	SLT2	Q00772	484 aa		13.66	□□□□□ -0.22
TIR1	YER011W	YLR149C	Q99296	730 aa		13.66	□□□□□ -0.22
TIR1	YER011W	ETR1	P38071	380 aa		13.65	□□□□□ -0.22
TIR1	YER011W	SPC97	P38863	823 aa		13.65	□□□□□ -0.22
TIR1	YER011W	TES1	P41903	349 aa	Known RBP	13.65	□□□□□ -0.22
TIR1	YER011W	TDA7	P53882	636 aa	Predicted RBP	13.65	□□□□□ -0.22
TIR1	YER011W	YDR132C	Q03900	495 aa		13.65	□□□□□ -0.22
TIR1	YER011W	YET3	Q07451	203 aa		13.65	□□□□□ -0.22
TIR1	YER011W	ATP12	P22135	325 aa		13.64	□□□□□ -0.23
TIR1	YER011W	GDA1	P32621	518 aa		13.64	□□□□□ -0.23
TIR1	YER011W	IMP3	P32899	183 aa	Predicted RBP	13.64	□□□□□ -0.23
TIR1	YER011W	FMO1	P38866	432 aa		13.64	□□□□□ -0.23
TIR1	YER011W	RPL34B	P40525	121 aa	Known RBP	13.64	□□□□□ -0.23
TIR1	YER011W	FAA4	P47912	694 aa	Known RBP	13.64	□□□□□ -0.23
TIR1	YER011W	NUP84	P52891	726 aa		13.64	□□□□□ -0.23
TIR1	YER011W	HST2	P53686	357 aa		13.64	□□□□□ -0.23
TIR1	YER011W	VAC7	P53950	1165 aa		13.64	□□□□□ -0.23
TIR1	YER011W	RNT1	Q02555	471 aa		13.64	□□□□□ -0.23
TIR1	YER011W	YMR178W	Q03219	274 aa	Known RBP	13.64	□□□□□ -0.23
TIR1	YER011W	CDC123	Q05791	360 aa		13.64	□□□□□ -0.23
TIR1	YER011W	MCP2	Q06567	569 aa		13.64	□□□□□ -0.23
TIR1	YER011W	ADY3	Q07732	790 aa		13.64	□□□□□ -0.23
TIR1	YER011W	YEL077C	Q3E7X8	1277 aa		13.64	□□□□□ -0.23
TIR1	YER011W	YOR338W	Q99326	363 aa		13.64	□□□□□ -0.23
TIR1	YER011W	MAK5	P38112	773 aa	Predicted RBP	13.63	□□□□□ -0.23
TIR1	YER011W	SER33	P40510	469 aa		13.63	□□□□□ -0.23
TIR1	YER011W	PEX8	P53248	589 aa		13.63	□□□□□ -0.23
TIR1	YER011W	PET117	Q02771	107 aa		13.63	□□□□□ -0.23
TIR1	YER011W	RPN9	Q04062	393 aa	Known RBP	13.63	□□□□□ -0.23
TIR1	YER011W	PPN1	Q04119	674 aa		13.63	□□□□□ -0.23
TIR1	YER011W	SFH1	Q06168	426 aa		13.63	□□□□□ -0.23
TIR1	YER011W	RUD3	Q12234	484 aa	Known RBP	13.63	□□□□□ -0.23
TIR1	YER011W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	13.62	□□□□□ -0.23	not detected
TIR1	YER011W	DCW1	P36091	449 aa		13.62	□□□□□ -0.23
TIR1	YER011W	IRS4	P36115	615 aa	Known RBP	13.62	□□□□□ -0.23
TIR1	YER011W	MEF2	P39677	819 aa		13.62	□□□□□ -0.23
TIR1	YER011W	CCT8	P47079	568 aa	Known RBP	13.62	□□□□□ -0.23
TIR1	YER011W	CLU1	Q03690	1277 aa	Known RBP	13.62	□□□□□ -0.23
TIR1	YER011W	YDR109C	Q04585	715 aa		13.62	□□□□□ -0.23
TIR1	YER011W	RSC2	Q06488	889 aa		13.62	□□□□□ -0.23
TIR1	YER011W	FRT1	Q99332	602 aa		13.62	□□□□□ -0.23
TIR1	YER011W	RAD3	P06839	778 aa		13.61	□□□□□ -0.23
TIR1	YER011W	HOM2	P13663	365 aa	Known RBP	13.61	□□□□□ -0.23
TIR1	YER011W	MSH2	P25847	964 aa		13.61	□□□□□ -0.23
TIR1	YER011W	BRF1	P29056	596 aa		13.61	□□□□□ -0.23
TIR1	YER011W	OAF3	P36023	863 aa		13.61	□□□□□ -0.23
TIR1	YER011W	PPX1	P38698	397 aa		13.61	□□□□□ -0.23
TIR1	YER011W	YHI9	P38765	294 aa		13.61	□□□□□ -0.23
TIR1	YER011W	REV7	P38927	245 aa		13.61	□□□□□ -0.23
TIR1	YER011W	COG7	P53195	279 aa		13.61	□□□□□ -0.23
TIR1	YER011W	YNL143C	P53908	130 aa		13.61	□□□□□ -0.23
TIR1	YER011W	TFB2	Q02939	513 aa		13.61	□□□□□ -0.23
TIR1	YER011W	BUD22	Q04347	519 aa	Known RBP	13.61	□□□□□ -0.23
TIR1	YER011W	FAB1	P34756	2278 aa		13.6	□□□□□ -0.23
TIR1	YER011W	SSC1	P0CS90	654 aa	Known RBP	13.6	□□□□□ -0.23
TIR1	YER011W	BEM1	P29366	551 aa		13.6	□□□□□ -0.23
TIR1	YER011W	PHO11	P35842	467 aa		13.6	□□□□□ -0.23
TIR1	YER011W	PHO12	P38693	467 aa		13.6	□□□□□ -0.23
TIR1	YER011W	HXT5	P38695	592 aa		13.6	□□□□□ -0.23
TIR1	YER011W	LRP1	P38801	184 aa	Known RBP	13.6	□□□□□ -0.23
TIR1	YER011W	ARH1	P48360	493 aa		13.6	□□□□□ -0.23
TIR1	YER011W	NPY1	P53164	384 aa		13.6	□□□□□ -0.23
TIR1	YER011W	LSC1	P53598	329 aa	Known RBP	13.6	□□□□□ -0.23
TIR1	YER011W	RMD5	Q12508	421 aa		13.6	□□□□□ -0.23
TIR1	YER011W	NSP1	P14907	823 aa	Known RBP	13.59	□□□□□ -0.23
TIR1	YER011W	HCM1	P25364	564 aa		13.59	□□□□□ -0.23
TIR1	YER011W	PMT1	P33775	817 aa		13.59	□□□□□ -0.23
TIR1	YER011W	SET3	P36124	751 aa		13.59	□□□□□ -0.23
TIR1	YER011W	GND1	P38720	489 aa	Known RBP	13.59	□□□□□ -0.23
TIR1	YER011W	YGL140C	P53120	1219 aa		13.59	□□□□□ -0.23
TIR1	YER011W	SYT1	Q06836	1226 aa		13.59	□□□□□ -0.23
TIR1	YER011W	VHS3	Q08438	674 aa		13.59	□□□□□ -0.23
TIR1	YER011W	MPH2	P0CD99	609 aa		13.58	□□□□□ -0.24
TIR1	YER011W	AMD1	P15274	810 aa	Known RBP	13.58	□□□□□ -0.24
TIR1	YER011W	HRR25	P29295	494 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms