RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeastyeast

Gene RIB3, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIB3YDR487C EMC1P25574 760 aa9.59□□□□□ -0.87
RIB3YDR487C PAP1P29468 568 aaKnown RBP9.59□□□□□ -0.87
RIB3YDR487C SRP72P38688 640 aaKnown RBP9.59□□□□□ -0.87
RIB3YDR487C STN1P38960 494 aa9.59□□□□□ -0.87
RIB3YDR487C NDC80P40460 691 aa9.59□□□□□ -0.87
RIB3YDR487C SET2P46995 733 aaKnown RBP9.59□□□□□ -0.87
RIB3YDR487C COG1P53079 417 aa9.59□□□□□ -0.87
RIB3YDR487C PCL10P53124 433 aa9.59□□□□□ -0.87
RIB3YDR487C SWC4P53201 476 aa9.59□□□□□ -0.87
RIB3YDR487C SWS2P53937 143 aa9.59□□□□□ -0.87
RIB3YDR487C TRM82Q03774 444 aa9.59□□□□□ -0.87
RIB3YDR487C POB3Q04636 552 aaKnown RBP9.59□□□□□ -0.87
RIB3YDR487C ECI1Q05871 280 aa9.59□□□□□ -0.87
RIB3YDR487C RTT10Q08924 1013 aa9.59□□□□□ -0.87
RIB3YDR487C HOS1Q12214 470 aa9.59□□□□□ -0.87
RIB3YDR487C AVL9Q12500 764 aa9.59□□□□□ -0.87
RIB3YDR487C UBA1P22515 1024 aaKnown RBP9.58□□□□□ -0.88
RIB3YDR487C PUF4P25339 888 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
RIB3YDR487C HEM12P32347 362 aaPredicted RBP9.58□□□□□ -0.88
RIB3YDR487C PBP2P38151 413 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
RIB3YDR487C POP4P38336 279 aa9.58□□□□□ -0.88
RIB3YDR487C SMF2P38778 549 aa9.58□□□□□ -0.88
RIB3YDR487C SMF1P38925 575 aa9.58□□□□□ -0.88
RIB3YDR487C LTP1P40347 161 aa9.58□□□□□ -0.88
RIB3YDR487C TES1P41903 349 aaKnown RBP9.58□□□□□ -0.88
RIB3YDR487C MTO1P53070 669 aa9.58□□□□□ -0.88
RIB3YDR487C YPR003CP53394 754 aa9.58□□□□□ -0.88
RIB3YDR487C CPR6P53691 371 aaKnown RBP9.58□□□□□ -0.88
RIB3YDR487C EFM6P53970 246 aa9.58□□□□□ -0.88
RIB3YDR487C NUP100Q02629 959 aa9.58□□□□□ -0.88
RIB3YDR487C SNT1P25357 1226 aa9.57□□□□□ -0.88
RIB3YDR487C CIN8P27895 1000 aa9.57□□□□□ -0.88
RIB3YDR487C GCD6P32501 712 aaKnown RBP9.57□□□□□ -0.88
RIB3YDR487C CNS1P33313 385 aa9.57□□□□□ -0.88
RIB3YDR487C CTF13P35203 478 aa9.57□□□□□ -0.88
RIB3YDR487C MUM2P38236 366 aa9.57□□□□□ -0.88
RIB3YDR487C MMS21P38632 267 aa9.57□□□□□ -0.88
RIB3YDR487C RPH1P39956 796 aa9.57□□□□□ -0.88
RIB3YDR487C SCC4P40090 624 aa9.57□□□□□ -0.88
RIB3YDR487C SUN4P53616 420 aa9.57□□□□□ -0.88
RIB3YDR487C YMR160WQ03823 816 aa9.57□□□□□ -0.88
RIB3YDR487C URH1Q04179 340 aa9.57□□□□□ -0.88
RIB3YDR487C ARG7Q04728 441 aa9.57□□□□□ -0.88
RIB3YDR487C TGL5Q12043 749 aa9.57□□□□□ -0.88
RIB3YDR487C ERR1P0CX10 437 aa9.56□□□□□ -0.88
RIB3YDR487C ERR2P0CX11 437 aa9.56□□□□□ -0.88
RIB3YDR487C PEX5P35056 612 aa9.56□□□□□ -0.88
RIB3YDR487C VHC1P38329 1120 aa9.56□□□□□ -0.88
RIB3YDR487C YIL108WP40483 696 aaKnown RBP9.56□□□□□ -0.88
RIB3YDR487C ERR3P42222 437 aa9.56□□□□□ -0.88
RIB3YDR487C UTP6Q02354 440 aaKnown RBP9.56□□□□□ -0.88
RIB3YDR487C CIA1Q05583 330 aa9.56□□□□□ -0.88
RIB3YDR487C ESC2Q06340 456 aa9.56□□□□□ -0.88
RIB3YDR487C MCP2Q06567 569 aa9.56□□□□□ -0.88
RIB3YDR487C CDC73Q06697 393 aa9.56□□□□□ -0.88
RIB3YDR487C YLL032CQ07834 825 aaKnown RBP RIP-Chip data9.56□□□□□ -0.88not detected
RIB3YDR487C APA1P16550 321 aaKnown RBP9.55□□□□□ -0.88
RIB3YDR487C GAL11P19659 1081 aa9.55□□□□□ -0.88
RIB3YDR487C EPT1P22140 391 aa9.55□□□□□ -0.88
RIB3YDR487C TSR4P25040 408 aa9.55□□□□□ -0.88
RIB3YDR487C GID7P25569 745 aa9.55□□□□□ -0.88
RIB3YDR487C MGT1P26188 188 aa9.55□□□□□ -0.88
RIB3YDR487C PLC1P32383 869 aa9.55□□□□□ -0.88
RIB3YDR487C SPS19P32573 292 aaKnown RBP9.55□□□□□ -0.88
RIB3YDR487C IMP3P32899 183 aaPredicted RBP9.55□□□□□ -0.88
RIB3YDR487C ERV46P39727 415 aa9.55□□□□□ -0.88
RIB3YDR487C MAD1P40957 749 aa9.55□□□□□ -0.88
RIB3YDR487C SUM1P46676 1062 aa9.55□□□□□ -0.88
RIB3YDR487C NOP15P53927 220 aaPredicted RBP9.55□□□□□ -0.88
RIB3YDR487C TGL2P54857 326 aa9.55□□□□□ -0.88
RIB3YDR487C YDR132CQ03900 495 aa9.55□□□□□ -0.88
RIB3YDR487C SRO7Q12038 1033 aa9.55□□□□□ -0.88
RIB3YDR487C MCM16Q12262 181 aa9.55□□□□□ -0.88
RIB3YDR487C FRT1Q99332 602 aa9.55□□□□□ -0.88
RIB3YDR487C INH1P01097 85 aa9.54□□□□□ -0.88
RIB3YDR487C SBP1P10080 294 aaKnown RBP9.54□□□□□ -0.88
RIB3YDR487C PHO11P35842 467 aa9.54□□□□□ -0.88
RIB3YDR487C MAK5P38112 773 aaPredicted RBP9.54□□□□□ -0.88
RIB3YDR487C UBP14P38237 781 aaKnown RBP9.54□□□□□ -0.88
RIB3YDR487C PHO12P38693 467 aa9.54□□□□□ -0.88
RIB3YDR487C RPL34BP40525 121 aaKnown RBP9.54□□□□□ -0.88
RIB3YDR487C YFR018CP43599 363 aa9.54□□□□□ -0.88
RIB3YDR487C ATG36P46983 293 aa9.54□□□□□ -0.88
RIB3YDR487C RTA1P53047 317 aa9.54□□□□□ -0.88
RIB3YDR487C TRS31Q03337 283 aa9.54□□□□□ -0.88
RIB3YDR487C RPN9Q04062 393 aaKnown RBP9.54□□□□□ -0.88
RIB3YDR487C EMI1Q04406 187 aa9.54□□□□□ -0.88
RIB3YDR487C HBT1Q07653 1046 aaKnown RBP9.54□□□□□ -0.88
RIB3YDR487C THI73Q07904 523 aa9.54□□□□□ -0.88
RIB3YDR487C YLR149CQ99296 730 aa9.54□□□□□ -0.88
RIB3YDR487C IMA3P0CW40 589 aa9.53□□□□□ -0.88
RIB3YDR487C IMA4P0CW41 589 aa9.53□□□□□ -0.88
RIB3YDR487C RED1P14291 827 aa9.53□□□□□ -0.88
RIB3YDR487C YCL068CP25593 260 aa9.53□□□□□ -0.88
RIB3YDR487C OCA5P38738 679 aa9.53□□□□□ -0.88
RIB3YDR487C DPH1P40487 425 aaKnown RBP9.53□□□□□ -0.88
RIB3YDR487C IRR1P40541 1150 aa9.53□□□□□ -0.88
RIB3YDR487C PXA1P41909 870 aa9.53□□□□□ -0.88
RIB3YDR487C CTK3P46963 296 aaPredicted RBP9.53□□□□□ -0.88
RIB3YDR487C CIS3P47001 227 aa9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 120.5 ms