RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHX1	YDR456W	YBR032W	P38223	100 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	UBS1	P38290	277 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	YBR259W	P38338	688 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	AIM46	P38885	310 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	YHB1	P39676	399 aa	Known RBP	4.2	□□□□□ -1.74
NHX1	YDR456W	NOP16	P40007	231 aa	Known RBP	4.2	□□□□□ -1.74
NHX1	YDR456W	SNL1	P40548	159 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	YIR042C	P40586	236 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	LYS14	P40971	790 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	RMD8	P43620	662 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NHX1	YDR456W	ARC1	P46672	376 aa	Known RBP	4.2	□□□□□ -1.74
NHX1	YDR456W	JJJ2	P46997	583 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	DSE4	P53753	1117 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	CBK1	P53894	756 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	TIM11	P81449	96 aa	Predicted RBP	4.2	□□□□□ -1.74
NHX1	YDR456W	UBP16	Q02863	499 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	FIN1	Q03898	291 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	PEX15	Q08215	383 aa		4.2	□□□□□ -1.74
NHX1	YDR456W	RIB2	Q12362	591 aa	Known RBP	4.2	□□□□□ -1.74
NHX1	YDR456W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	RIP-Chip
NHX1	YDR456W	ATP12	P22135	325 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	PAH1	P32567	862 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	CSE1	P33307	960 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	YKL063C	P35725	167 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	YKL023W	P36103	277 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	NTR2	P36118	322 aa	Predicted RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	ETR1	P38071	380 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	YBR238C	P38330	731 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	RRT2	P38332	387 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	ERG7	P38604	731 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	SSZ1	P38788	538 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	END3	P39013	349 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	LSM5	P40089	93 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	YIL165C	P40446	119 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	SBE2	P42223	864 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	NUP85	P46673	744 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	RNR4	P49723	345 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	YML6	P51998	286 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	USE1	P53146	245 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	PGA2	P53903	129 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	MMT1	Q03218	510 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	CLU1	Q03690	1277 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	YDR179W-A	Q03983	463 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	YLR297W	Q05899	129 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	OPT2	Q06593	877 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	PMT7	Q06644	662 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	GUD1	Q07729	489 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	NOP12	Q08208	459 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	CIR2	Q08822	631 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	TRM11	Q12463	433 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	RPP2B	P02400	110 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	NUC1	P08466	329 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	HVG1	P0CE11	249 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	SSC1	P0CS90	654 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	PDC5	P16467	563 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	RER1	P25560	188 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	POL4	P25615	582 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	SYP1	P25623	870 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	ATP7	P30902	174 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	KAP122	P32767	1081 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	PPS1	P38148	807 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	MSG5	P38590	489 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	GOS1	P38736	223 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	YHR218W	P38899	603 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	STL1	P39932	569 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	YER137C	P40083	148 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	YMR134W	P40207	237 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	PAC11	P40960	533 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	LEM3	P42838	414 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	RRT6	P53117	311 aa	Predicted RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	DRN1	P53255	507 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	DCP2	P53550	970 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	DIG1	Q03063	452 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	GIS4	Q04233	774 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	MYO5	Q04439	1219 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	UTP21	Q06078	939 aa	Predicted RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	SYO1	Q07395	620 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	TCO89	Q08921	799 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	ATP16	Q12165	160 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	RRG1	Q12167	365 aa	Predicted RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	HER1	Q12276	1246 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	NOT5	Q12514	560 aa	Predicted RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	HTZ1	Q12692	134 aa	Known RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	HSH49	Q99181	213 aa	Predicted RBP	4.19	□□□□□ -1.74
NHX1	YDR456W	RAD61	Q99359	647 aa		4.19	□□□□□ -1.74
NHX1	YDR456W	FLO11	P08640	1367 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	SEM1	O94742	89 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	RSR1	P13856	272 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	PRP6	P19735	899 aa	Predicted RBP	4.18	□□□□□ -1.74
NHX1	YDR456W	RIT1	P23796	513 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	SEC1	P30619	724 aa	Known RBP	4.18	□□□□□ -1.74
NHX1	YDR456W	AFG2	P32794	780 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	ATO2	P32907	282 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	WHI3	P34761	661 aa	Known RBP	4.18	□□□□□ -1.74
NHX1	YDR456W	MDJ1	P35191	511 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	AXL2	P38928	823 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	RIC1	P40395	1056 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	VHR1	P40522	640 aa		4.18	□□□□□ -1.74
NHX1	YDR456W	ULP2	P40537	1034 aa	Predicted RBP	4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms