RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C FLO11P08640 1367 aa3.59□□□□□ -1.84
CDC40YDR364C CHO2P05374 869 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C RPS9BP05755 195 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C HOM3P10869 527 aa3.58□□□□□ -1.84
CDC40YDR364C GUK1P15454 187 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C NCP1P16603 691 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C MCM3P24279 971 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C YCL049CP25577 312 aa3.58□□□□□ -1.84
CDC40YDR364C RAD16P31244 790 aa3.58□□□□□ -1.84
CDC40YDR364C PRX1P34227 261 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C NUP120P35729 1037 aa3.58□□□□□ -1.84
CDC40YDR364C GLG1P36143 616 aa3.58□□□□□ -1.84
CDC40YDR364C YHR033WP38690 423 aa3.58□□□□□ -1.84
CDC40YDR364C MIP6P38760 659 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C RTS1P38903 757 aa3.58□□□□□ -1.84
CDC40YDR364C REV7P38927 245 aa3.58□□□□□ -1.84
CDC40YDR364C AXL2P38928 823 aa3.58□□□□□ -1.84
CDC40YDR364C BEM4P39011 633 aa3.58□□□□□ -1.84
CDC40YDR364C IMA5P40884 581 aa3.58□□□□□ -1.84
CDC40YDR364C EPL1P43572 832 aa3.58□□□□□ -1.84
CDC40YDR364C SET2P46995 733 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C CPR6P53691 371 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C SQS1P53866 767 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C SXM1Q04175 944 aaKnown RBP3.58□□□□□ -1.84
CDC40YDR364C VID22Q05934 901 aa3.58□□□□□ -1.84
CDC40YDR364C YPS7Q06325 596 aa3.58□□□□□ -1.84
CDC40YDR364C PSK2Q08217 1101 aa3.58□□□□□ -1.84
CDC40YDR364C HSH49Q99181 213 aaPredicted RBP3.58□□□□□ -1.84
CDC40YDR364C FLO1P32768 1537 aa3.57□□□□□ -1.84
CDC40YDR364C CPA2P03965 1118 aaKnown RBP3.57□□□□□ -1.84
CDC40YDR364C MTF2P10849 440 aa3.57□□□□□ -1.84
CDC40YDR364C CLC1P17891 233 aa3.57□□□□□ -1.84
CDC40YDR364C UBC1P21734 215 aaKnown RBP3.57□□□□□ -1.84
CDC40YDR364C RIT1P23796 513 aa3.57□□□□□ -1.84
CDC40YDR364C ANP1P32629 500 aa3.57□□□□□ -1.84
CDC40YDR364C SIC1P38634 284 aa3.57□□□□□ -1.84
CDC40YDR364C BDH2P39713 417 aa3.57□□□□□ -1.84
CDC40YDR364C NOP16P40007 231 aaKnown RBP3.57□□□□□ -1.84
CDC40YDR364C ARG2P40360 574 aa3.57□□□□□ -1.84
CDC40YDR364C DPH1P40487 425 aaKnown RBP3.57□□□□□ -1.84
CDC40YDR364C SGM1P47166 707 aa3.57□□□□□ -1.84
CDC40YDR364C CTR1P49573 406 aa3.57□□□□□ -1.84
CDC40YDR364C MDR1P53258 950 aa3.57□□□□□ -1.84
CDC40YDR364C MRPL19P53875 158 aa3.57□□□□□ -1.84
CDC40YDR364C RPS15Q01855 142 aaKnown RBP3.57□□□□□ -1.84
CDC40YDR364C TIM50Q02776 476 aa3.57□□□□□ -1.84
CDC40YDR364C CRF1Q04930 467 aa3.57□□□□□ -1.84
CDC40YDR364C YLR287CQ05881 355 aa3.57□□□□□ -1.84
CDC40YDR364C TFC6Q06339 672 aa3.57□□□□□ -1.84
CDC40YDR364C YCG1Q06680 1035 aa3.57□□□□□ -1.84
CDC40YDR364C VHS3Q08438 674 aa3.57□□□□□ -1.84
CDC40YDR364C DBP10Q12389 995 aaKnown RBP3.57□□□□□ -1.84
CDC40YDR364C RAD61Q99359 647 aa3.57□□□□□ -1.84
CDC40YDR364C PCK1P10963 549 aa3.56□□□□□ -1.84
CDC40YDR364C CDC60P26637 1090 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C CMK1P27466 446 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C PRO3P32263 286 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C MF(ALPHA)2P32435 120 aa3.56□□□□□ -1.84
CDC40YDR364C CNS1P33313 385 aa3.56□□□□□ -1.84
CDC40YDR364C MYO3P36006 1272 aa3.56□□□□□ -1.84
CDC40YDR364C TEF4P36008 412 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C STV1P37296 890 aa3.56□□□□□ -1.84
CDC40YDR364C IFA38P38286 347 aa3.56□□□□□ -1.84
CDC40YDR364C STT3P39007 718 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C SSP120P39931 234 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C LTP1P40347 161 aa3.56□□□□□ -1.84
CDC40YDR364C HYR1P40581 163 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C LYS14P40971 790 aa3.56□□□□□ -1.84
CDC40YDR364C UPF3P48412 387 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C MRK1P50873 501 aa3.56□□□□□ -1.84
CDC40YDR364C VPS4P52917 437 aa3.56□□□□□ -1.84
CDC40YDR364C TRM44Q02648 567 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C TDA9Q04545 1251 aa3.56□□□□□ -1.84
CDC40YDR364C YLR352WQ06479 807 aa3.56□□□□□ -1.84
CDC40YDR364C CSR1Q06705 408 aaKnown RBP3.56□□□□□ -1.84
CDC40YDR364C IWR1Q07532 353 aaPredicted RBP3.56□□□□□ -1.84
CDC40YDR364C OSW1Q08692 278 aa3.56□□□□□ -1.84
CDC40YDR364C KEL3Q08979 651 aaPredicted RBP3.56□□□□□ -1.84
CDC40YDR364C TRM8Q12009 286 aa3.56□□□□□ -1.84
CDC40YDR364C RTK1Q12100 620 aaPredicted RBP3.56□□□□□ -1.84
CDC40YDR364C HOS1Q12214 470 aa3.56□□□□□ -1.84
CDC40YDR364C YOR111WQ99210 232 aa3.56□□□□□ -1.84
CDC40YDR364C PYC1P11154 1178 aaKnown RBP3.55□□□□□ -1.84
CDC40YDR364C BET2P20133 325 aa3.55□□□□□ -1.84
CDC40YDR364C RNR3P21672 869 aaKnown RBP3.55□□□□□ -1.84
CDC40YDR364C MAK31P23059 88 aa3.55□□□□□ -1.84
CDC40YDR364C PTP1P25044 335 aa3.55□□□□□ -1.84
CDC40YDR364C SWI4P25302 1093 aaKnown RBP3.55□□□□□ -1.84
CDC40YDR364C VMA8P32610 256 aaKnown RBP3.55□□□□□ -1.84
CDC40YDR364C BMH2P34730 273 aaKnown RBP3.55□□□□□ -1.84
CDC40YDR364C PEX5P35056 612 aa3.55□□□□□ -1.84
CDC40YDR364C YKL050CP35736 922 aa3.55□□□□□ -1.84
CDC40YDR364C YBR259WP38338 688 aa3.55□□□□□ -1.84
CDC40YDR364C YER010CP40011 234 aa3.55□□□□□ -1.84
CDC40YDR364C KHA1P40309 873 aa3.55□□□□□ -1.84
CDC40YDR364C CSM2P40465 213 aa3.55□□□□□ -1.84
CDC40YDR364C RSM25P40496 264 aa3.55□□□□□ -1.84
CDC40YDR364C PUS4P48567 403 aaKnown RBP3.55□□□□□ -1.84
CDC40YDR364C MNT2P53059 558 aa3.55□□□□□ -1.84
CDC40YDR364C COX18P53239 316 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms