RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W GIS1Q03833 894 aa1.44□□□□□ -2.18
MSN5YDR335W LUC7Q07508 261 aaPredicted RBP1.44□□□□□ -2.18
MSN5YDR335W DCI1Q08558 271 aa1.44□□□□□ -2.18
MSN5YDR335W HFI1Q12060 488 aa1.44□□□□□ -2.18
MSN5YDR335W MDM20Q12387 796 aaKnown RBP1.44□□□□□ -2.18
MSN5YDR335W FIG2P25653 1609 aa1.43□□□□□ -2.18
MSN5YDR335W GAL80P04387 435 aa1.43□□□□□ -2.18
MSN5YDR335W ALY1P36117 915 aa1.43□□□□□ -2.18
MSN5YDR335W PXL1P36166 706 aa1.43□□□□□ -2.18
MSN5YDR335W SIF2P38262 535 aa1.43□□□□□ -2.18
MSN5YDR335W TSL1P38427 1098 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W AIM10P39965 576 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W AIP1P46680 615 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W ALT1P52893 592 aa1.43□□□□□ -2.18
MSN5YDR335W RHO5P53879 331 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W RRN5Q02983 363 aa1.43□□□□□ -2.18
MSN5YDR335W YML037CQ03703 340 aa1.43□□□□□ -2.18
MSN5YDR335W COG8Q04632 607 aa1.43□□□□□ -2.18
MSN5YDR335W WHI4Q07655 649 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W TMA16Q08687 178 aa1.43□□□□□ -2.18
MSN5YDR335W CFT1Q06632 1357 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W SEC12P11655 471 aa1.43□□□□□ -2.18
MSN5YDR335W MDH1P17505 334 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
MSN5YDR335W HOP1P20050 605 aa1.43□□□□□ -2.18
MSN5YDR335W PRP22P24384 1145 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W RME1P32338 300 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W MRPL40P36534 297 aa1.43□□□□□ -2.18
MSN5YDR335W NOP4P37838 685 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W COS111P38308 924 aa1.43□□□□□ -2.18
MSN5YDR335W END3P39013 349 aa1.43□□□□□ -2.18
MSN5YDR335W VFA1P40080 203 aa1.43□□□□□ -2.18
MSN5YDR335W YIL161WP40449 235 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W DJP1P40564 432 aa1.43□□□□□ -2.18
MSN5YDR335W IST3P40565 148 aaPredicted RBP1.43□□□□□ -2.18
MSN5YDR335W YFR018CP43599 363 aa1.43□□□□□ -2.18
MSN5YDR335W CTR1P49573 406 aa1.43□□□□□ -2.18
MSN5YDR335W ARE2P53629 642 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W VPS75P53853 264 aa1.43□□□□□ -2.18
MSN5YDR335W GIM3P53900 129 aa1.43□□□□□ -2.18
MSN5YDR335W HEF3P53978 1044 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W SMA1Q02651 245 aa1.43□□□□□ -2.18
MSN5YDR335W CWC21Q03375 135 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W RSM28Q03430 361 aa1.43□□□□□ -2.18
MSN5YDR335W HOF1Q05080 669 aa1.43□□□□□ -2.18
MSN5YDR335W ASM4Q05166 528 aa1.43□□□□□ -2.18
MSN5YDR335W RGC1Q06108 1083 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W SIL1Q08199 421 aa1.43□□□□□ -2.18
MSN5YDR335W CTI6Q08923 506 aa1.43□□□□□ -2.18
MSN5YDR335W NUS1Q12063 375 aa1.43□□□□□ -2.18
MSN5YDR335W GPR1Q12361 961 aa1.43□□□□□ -2.18
MSN5YDR335W PNO1Q99216 274 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W SEM1O94742 89 aa1.43□□□□□ -2.18
MSN5YDR335W TUB2P02557 457 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W TUF1P02992 437 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W MIH1P23748 554 aa1.43□□□□□ -2.18
MSN5YDR335W RRP43P25359 394 aaPredicted RBP1.43□□□□□ -2.18
MSN5YDR335W DMC1P25453 334 aa1.43□□□□□ -2.18
MSN5YDR335W CWH43P25618 953 aa1.43□□□□□ -2.18
MSN5YDR335W POT1P27796 417 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
MSN5YDR335W YBL055CP34220 418 aaPredicted RBP1.43□□□□□ -2.18
MSN5YDR335W OTU2P38747 307 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W BUR6P40096 142 aa1.43□□□□□ -2.18
MSN5YDR335W PKP1P40530 394 aa1.43□□□□□ -2.18
MSN5YDR335W IRC8P47046 822 aa1.43□□□□□ -2.18
MSN5YDR335W OCA1P50946 238 aaPredicted RBP1.43□□□□□ -2.18
MSN5YDR335W IPI3P53877 555 aa1.43□□□□□ -2.18
MSN5YDR335W YNL144CP53907 740 aa1.43□□□□□ -2.18
MSN5YDR335W YPL108WQ02872 168 aaPredicted RBP1.43□□□□□ -2.18
MSN5YDR335W SRT1Q03175 343 aa1.43□□□□□ -2.18
MSN5YDR335W PLB2Q03674 706 aa1.43□□□□□ -2.18
MSN5YDR335W VPS64Q03944 604 aa1.43□□□□□ -2.18
MSN5YDR335W PPM1Q04081 328 aa1.43□□□□□ -2.18
MSN5YDR335W CRF1Q04930 467 aa1.43□□□□□ -2.18
MSN5YDR335W IWR1Q07532 353 aaPredicted RBP1.43□□□□□ -2.18
MSN5YDR335W PUS7Q08647 676 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W YPL260WQ08977 551 aa1.43□□□□□ -2.18
MSN5YDR335W ACM1Q08981 209 aa1.43□□□□□ -2.18
MSN5YDR335W SPE3Q12074 293 aaKnown RBP1.43□□□□□ -2.18
MSN5YDR335W RTK1Q12100 620 aaPredicted RBP1.43□□□□□ -2.18
MSN5YDR335W SVS1Q12254 260 aa1.43□□□□□ -2.18
MSN5YDR335W GIS3Q12418 502 aa1.43□□□□□ -2.18
MSN5YDR335W FKS3Q04952 1785 aa1.42□□□□□ -2.18
MSN5YDR335W GSC2P40989 1895 aa1.42□□□□□ -2.18
MSN5YDR335W VMA2P16140 517 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W TPM1P17536 199 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W ADK2P26364 225 aa1.42□□□□□ -2.18
MSN5YDR335W TYE7P33122 291 aaPredicted RBP1.42□□□□□ -2.18
MSN5YDR335W NNK1P36003 928 aa1.42□□□□□ -2.18
MSN5YDR335W ECM21P38167 1117 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W SRP68P38687 599 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W VPS45P38932 577 aa1.42□□□□□ -2.18
MSN5YDR335W VPS41P38959 992 aa1.42□□□□□ -2.18
MSN5YDR335W BUD16P39988 312 aa1.42□□□□□ -2.18
MSN5YDR335W IRC24P40580 263 aa1.42□□□□□ -2.18
MSN5YDR335W RPS7BP48164 190 aaKnown RBP1.42□□□□□ -2.18
MSN5YDR335W TNA1P53322 534 aa1.42□□□□□ -2.18
MSN5YDR335W NOP15P53927 220 aaPredicted RBP1.42□□□□□ -2.18
MSN5YDR335W RSM24Q03976 319 aa1.42□□□□□ -2.18
MSN5YDR335W RBA50Q04418 439 aa1.42□□□□□ -2.18
MSN5YDR335W ROY1Q04847 553 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms