RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C GCY1P14065 312 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SSD1YDR293C PRP4P20053 465 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C PWP1P21304 576 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C SLY1P22213 666 aa2.29□□□□□ -2.04
SSD1YDR293C RFA1P22336 621 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C VPS3P23643 1011 aa2.29□□□□□ -2.04
SSD1YDR293C FUB1P25659 250 aa2.29□□□□□ -2.04
SSD1YDR293C PHO91P27514 894 aa2.29□□□□□ -2.04
SSD1YDR293C SSE1P32589 693 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C RPT3P33298 428 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C MAC1P35192 417 aa2.29□□□□□ -2.04
SSD1YDR293C NCL1P38205 684 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C AMN1P38285 549 aaPredicted RBP2.29□□□□□ -2.04
SSD1YDR293C PIH1P38768 344 aa2.29□□□□□ -2.04
SSD1YDR293C EAF5P39995 279 aa2.29□□□□□ -2.04
SSD1YDR293C SMX2P40204 77 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C GLG2P47011 380 aa2.29□□□□□ -2.04
SSD1YDR293C NAS6P50086 228 aa2.29□□□□□ -2.04
SSD1YDR293C PSP2P50109 593 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C YGL108CP53139 140 aa2.29□□□□□ -2.04
SSD1YDR293C MOT3P54785 490 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C ORC3P54790 616 aa2.29□□□□□ -2.04
SSD1YDR293C TMA20P89886 181 aaPredicted RBP2.29□□□□□ -2.04
SSD1YDR293C ENA2Q01896 1091 aa2.29□□□□□ -2.04
SSD1YDR293C IRC15Q02733 499 aa2.29□□□□□ -2.04
SSD1YDR293C FMN1Q03778 218 aa2.29□□□□□ -2.04
SSD1YDR293C AIM33Q04516 312 aa2.29□□□□□ -2.04
SSD1YDR293C RSC2Q06488 889 aa2.29□□□□□ -2.04
SSD1YDR293C CLP1Q08685 445 aaPredicted RBP2.29□□□□□ -2.04
SSD1YDR293C MET32Q12041 191 aa2.29□□□□□ -2.04
SSD1YDR293C CWC2Q12046 339 aaPredicted RBP2.29□□□□□ -2.04
SSD1YDR293C YPR027CQ12079 277 aa2.29□□□□□ -2.04
SSD1YDR293C GTT2Q12390 233 aa2.29□□□□□ -2.04
SSD1YDR293C NKP1Q12493 238 aa2.29□□□□□ -2.04
SSD1YDR293C ENA5Q12691 1091 aa2.29□□□□□ -2.04
SSD1YDR293C YPT6Q99260 215 aa2.29□□□□□ -2.04
SSD1YDR293C ERG11P10614 530 aa2.29□□□□□ -2.04
SSD1YDR293C IDI1P15496 288 aa2.29□□□□□ -2.04
SSD1YDR293C SEC14P24280 304 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C YCL002CP25565 263 aa2.29□□□□□ -2.04
SSD1YDR293C URA7P28274 579 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C TFC1P32367 649 aa2.29□□□□□ -2.04
SSD1YDR293C YKR015CP36111 568 aa2.29□□□□□ -2.04
SSD1YDR293C MRPL7P36519 292 aa2.29□□□□□ -2.04
SSD1YDR293C EXO5P38289 585 aa2.29□□□□□ -2.04
SSD1YDR293C SFB3P38810 929 aa2.29□□□□□ -2.04
SSD1YDR293C TOK1P40310 691 aa2.29□□□□□ -2.04
SSD1YDR293C SAD1P43589 448 aa2.29□□□□□ -2.04
SSD1YDR293C NMD5P46970 1048 aa2.29□□□□□ -2.04
SSD1YDR293C ASN1P49089 572 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C TOM22P49334 152 aa2.29□□□□□ -2.04
SSD1YDR293C NUP84P52891 726 aa2.29□□□□□ -2.04
SSD1YDR293C PUS2P53167 370 aa2.29□□□□□ -2.04
SSD1YDR293C YNL146WP53906 100 aa2.29□□□□□ -2.04
SSD1YDR293C YNL144CP53907 740 aa2.29□□□□□ -2.04
SSD1YDR293C TGL2P54857 326 aa2.29□□□□□ -2.04
SSD1YDR293C RCF1Q03713 159 aa2.29□□□□□ -2.04
SSD1YDR293C PPM1Q04081 328 aa2.29□□□□□ -2.04
SSD1YDR293C PIG1Q06216 648 aa2.29□□□□□ -2.04
SSD1YDR293C YPL225WQ08971 146 aaKnown RBP2.29□□□□□ -2.04
SSD1YDR293C YOR223WQ12015 292 aa2.29□□□□□ -2.04
SSD1YDR293C YDR018CQ12185 396 aa2.29□□□□□ -2.04
SSD1YDR293C TRM11Q12463 433 aa2.29□□□□□ -2.04
SSD1YDR293C PYC1P11154 1178 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C WHI2P12611 486 aa2.28□□□□□ -2.04
SSD1YDR293C GCD2P12754 651 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C TUP1P16649 713 aa2.28□□□□□ -2.04
SSD1YDR293C PPH22P23595 377 aa2.28□□□□□ -2.04
SSD1YDR293C RRP43P25359 394 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C ICL1P28240 557 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C PTP2P29461 750 aa2.28□□□□□ -2.04
SSD1YDR293C ZIP1P31111 875 aa2.28□□□□□ -2.04
SSD1YDR293C SSH4P32343 579 aa2.28□□□□□ -2.04
SSD1YDR293C PUP2P32379 260 aa2.28□□□□□ -2.04
SSD1YDR293C PDB1P32473 366 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C ARB1P40024 610 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C ALG5P40350 334 aa2.28□□□□□ -2.04
SSD1YDR293C GVP36P40531 326 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C YFL040WP43562 540 aa2.28□□□□□ -2.04
SSD1YDR293C TMA22P47089 198 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C CPR7P47103 393 aa2.28□□□□□ -2.04
SSD1YDR293C VPS25P47142 202 aa2.28□□□□□ -2.04
SSD1YDR293C SFB2P53953 876 aa2.28□□□□□ -2.04
SSD1YDR293C ADA2Q02336 434 aa2.28□□□□□ -2.04
SSD1YDR293C ENT5Q03769 411 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C GYL1Q04322 720 aa2.28□□□□□ -2.04
SSD1YDR293C MCP2Q06567 569 aa2.28□□□□□ -2.04
SSD1YDR293C WHI4Q07655 649 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C DNL4Q08387 944 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C NRT1Q08485 598 aa2.28□□□□□ -2.04
SSD1YDR293C GNT1Q12096 491 aa2.28□□□□□ -2.04
SSD1YDR293C RUP1Q12242 671 aa2.28□□□□□ -2.04
SSD1YDR293C HSH49Q99181 213 aaPredicted RBP2.28□□□□□ -2.04
SSD1YDR293C GAL10P04397 699 aa2.28□□□□□ -2.04
SSD1YDR293C ATP1P07251 545 aaKnown RBP2.28□□□□□ -2.04
SSD1YDR293C SEC63P14906 663 aa2.28□□□□□ -2.04
SSD1YDR293C HEM15P16622 393 aa2.28□□□□□ -2.04
SSD1YDR293C BRF1P29056 596 aa2.28□□□□□ -2.04
SSD1YDR293C NDI1P32340 513 aa2.28□□□□□ -2.04
SSD1YDR293C SSE2P32590 693 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms