RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	SNL1	P40548	159 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	IMD4	P50094	524 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	RAI1	P53063	387 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	KTR6	P54070	446 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	VPS9	P54787	451 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	GIM5	Q04493	163 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	VBA4	Q04602	768 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	HDA2	Q06629	674 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	NDE2	Q07500	545 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	GPI13	Q07830	1017 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	YLR031W	Q07978	186 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	AKR2	Q12013	749 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	MSH5	Q12175	901 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	ISA2	Q12425	185 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	SNT2	P53127	1403 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	GAL7	P08431	366 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	MSD1	P15179	658 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	URA4	P20051	364 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	DBP3	P20447	523 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	CBP3	P21560	335 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	PHO3	P24031	467 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
YDR239C	YDR239C	RPC19	P28000	142 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	SRP101	P32916	621 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	KTR4	P38131	464 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	MRX3	P38172	270 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	YHR054C	P38780	354 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	TAT2	P38967	592 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	PCL6	P40038	420 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	YJL068C	P40363	299 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	NET1	P47035	1189 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	LOH1	P47055	219 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	RBL2	P48606	106 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	SLX9	P53251	210 aa	Predicted RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	UTP8	P53276	713 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	OKP1	P53298	406 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	MNT4	P53745	580 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	VAC7	P53950	1165 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	ORC4	P54791	529 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	NAN1	Q02931	896 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	HER2	Q03557	464 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	PDS5	Q04264	1277 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	URC2	Q04411	772 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	YMR114C	Q04471	368 aa	Known RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	DCR2	Q05924	578 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	YLR345W	Q06137	509 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	YLR455W	Q06188	304 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	MLC2	Q06580	163 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	FAP7	Q12055	197 aa	Predicted RBP	2.6	□□□□□ -1.99
YDR239C	YDR239C	OSW2	Q12202	724 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	ARP7	Q12406	477 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	ARP6	Q12509	438 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	TAD3	Q9URQ3	322 aa		2.6	□□□□□ -1.99
YDR239C	YDR239C	RPS9A	O13516	197 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	HIS4	P00815	799 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	RPS9B	P05755	195 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	ADE3	P07245	946 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	KIN2	P13186	1147 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	COX11	P19516	300 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	CMK2	P22517	447 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	GIT1	P25346	518 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	EMC1	P25574	760 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	YCR016W	P25617	290 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	HXT1	P32465	570 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	PRP19	P32523	503 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	BEM3	P32873	1128 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	NIC96	P34077	839 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	TPO5	P36029	618 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	ADE17	P38009	592 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	LDH1	P38139	375 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	TDP1	P38319	544 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	YHL041W	P38730	149 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	LIN1	P38852	340 aa	Predicted RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	STT3	P39007	718 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	TPA1	P40032	644 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	ATF1	P40353	525 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	HXT8	P40886	569 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	UFE1	P41834	346 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	YKE2	P52553	114 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	MCM6	P53091	1017 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	YAP1802	P53309	568 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	PGA2	P53903	129 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	EOS1	P53938	366 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	RCM1	P53972	490 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	UFD2	P54860	961 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	CIK1	Q01649	594 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	YKR005C	Q02203	525 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	IRC4	Q03036	179 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	RPN9	Q04062	393 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	NHX1	Q04121	633 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	ARA2	Q04212	335 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	ECM18	Q04623	453 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	VPS38	Q05919	439 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	BCP1	Q06338	283 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	OMS1	Q06668	471 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	TRE2	Q08693	809 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	RSA1	Q08932	381 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	YPL216W	Q08964	1102 aa		2.59	□□□□□ -1.99
YDR239C	YDR239C	THP3	Q12049	470 aa	Known RBP	2.59	□□□□□ -1.99
YDR239C	YDR239C	IES3	Q12345	250 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms