RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W CIN1P40987 1014 aa4.05□□□□□ -1.76
UBC9YDL064W ATP23P53722 227 aa4.05□□□□□ -1.76
UBC9YDL064W SPN1Q06505 410 aaPredicted RBP4.05□□□□□ -1.76
UBC9YDL064W BSP1Q06604 576 aa4.05□□□□□ -1.76
UBC9YDL064W LYS21Q12122 440 aaKnown RBP4.05□□□□□ -1.76
UBC9YDL064W NDJ1Q12366 352 aa4.05□□□□□ -1.76
UBC9YDL064W YOL087CQ99247 1116 aa4.05□□□□□ -1.76
UBC9YDL064W APN1P22936 367 aa4.04□□□□□ -1.76
UBC9YDL064W CNS1P33313 385 aa4.04□□□□□ -1.76
UBC9YDL064W FTH1P38310 465 aa4.04□□□□□ -1.76
UBC9YDL064W IST3P40565 148 aaPredicted RBP4.04□□□□□ -1.76
UBC9YDL064W LEA1Q08963 238 aaPredicted RBP4.04□□□□□ -1.76
UBC9YDL064W BI2P03873 423 aa4.03□□□□□ -1.76
UBC9YDL064W SPO16P17122 198 aa4.03□□□□□ -1.76
UBC9YDL064W APD1P38281 316 aa4.03□□□□□ -1.76
UBC9YDL064W KAP123P40069 1113 aaKnown RBP4.03□□□□□ -1.76
UBC9YDL064W FMP10P40098 244 aa4.03□□□□□ -1.76
UBC9YDL064W RIC1P40395 1056 aa4.03□□□□□ -1.76
UBC9YDL064W DJP1P40564 432 aa4.03□□□□□ -1.76
UBC9YDL064W ASE1P50275 885 aa4.03□□□□□ -1.76
UBC9YDL064W CBK1P53894 756 aa4.03□□□□□ -1.76
UBC9YDL064W YPL071CQ02864 156 aa4.03□□□□□ -1.76
UBC9YDL064W SNU56Q03782 492 aaKnown RBP4.03□□□□□ -1.76
UBC9YDL064W ATG23Q06671 453 aa4.03□□□□□ -1.76
UBC9YDL064W BAG7Q12128 409 aa4.03□□□□□ -1.76
UBC9YDL064W YLR302CO13544 120 aa4.02□□□□□ -1.77
UBC9YDL064W RER1P25560 188 aa4.02□□□□□ -1.77
UBC9YDL064W ORC2P32833 620 aa4.02□□□□□ -1.77
UBC9YDL064W RPT3P33298 428 aaKnown RBP4.02□□□□□ -1.77
UBC9YDL064W UBP13P38187 747 aa4.02□□□□□ -1.77
UBC9YDL064W SWP82P43554 623 aa4.02□□□□□ -1.77
UBC9YDL064W CRN1Q06440 651 aa4.02□□□□□ -1.77
UBC9YDL064W TPO3Q06451 622 aa4.02□□□□□ -1.77
UBC9YDL064W SWA2Q06677 668 aa4.02□□□□□ -1.77
UBC9YDL064W YDL121CQ07541 149 aa4.02□□□□□ -1.77
UBC9YDL064W PSK2Q08217 1101 aa4.02□□□□□ -1.77
UBC9YDL064W YOR019WQ99248 730 aa4.02□□□□□ -1.77
UBC9YDL064W VCX1Q99385 411 aa4.02□□□□□ -1.77
UBC9YDL064W PGK1P00560 416 aaKnown RBP4.01□□□□□ -1.77
UBC9YDL064W MDM10P18409 493 aa4.01□□□□□ -1.77
UBC9YDL064W SRP54P20424 541 aaKnown RBP4.01□□□□□ -1.77
UBC9YDL064W MRP20P32387 263 aa4.01□□□□□ -1.77
UBC9YDL064W SWE1P32944 819 aa4.01□□□□□ -1.77
UBC9YDL064W MUD2P36084 527 aaKnown RBP4.01□□□□□ -1.77
UBC9YDL064W PFK26P40433 827 aaKnown RBP4.01□□□□□ -1.77
UBC9YDL064W BPL1P48445 690 aaPredicted RBP4.01□□□□□ -1.77
UBC9YDL064W COQ11Q05892 277 aa4.01□□□□□ -1.77
UBC9YDL064W YNL162W-AQ3E7A8 72 aa4.01□□□□□ -1.77
UBC9YDL064W YER145C-AA0A023PYF4 145 aa4□□□□□ -1.77
UBC9YDL064W CET1O13297 549 aaPredicted RBP4□□□□□ -1.77
UBC9YDL064W YMR085WP0CF18 432 aa4□□□□□ -1.77
UBC9YDL064W URE2P23202 354 aaKnown RBP4□□□□□ -1.77
UBC9YDL064W CBF2P32504 956 aa4□□□□□ -1.77
UBC9YDL064W ADE17P38009 592 aaKnown RBP4□□□□□ -1.77
UBC9YDL064W CDC1P40986 491 aa4□□□□□ -1.77
UBC9YDL064W NMD5P46970 1048 aa4□□□□□ -1.77
UBC9YDL064W VPS4P52917 437 aa4□□□□□ -1.77
UBC9YDL064W YRB30P53107 440 aaPredicted RBP4□□□□□ -1.77
UBC9YDL064W RSC9Q03124 581 aa4□□□□□ -1.77
UBC9YDL064W RIM13Q03792 727 aa4□□□□□ -1.77
UBC9YDL064W YMR018WQ04364 514 aa4□□□□□ -1.77
UBC9YDL064W VIP1Q06685 1146 aaKnown RBP4□□□□□ -1.77
UBC9YDL064W THI3Q07471 609 aa4□□□□□ -1.77
UBC9YDL064W PFA4Q12006 378 aa4□□□□□ -1.77
UBC9YDL064W YDR056CQ12025 205 aa4□□□□□ -1.77
UBC9YDL064W ERG27Q12452 347 aaKnown RBP4□□□□□ -1.77
UBC9YDL064W FUM1P08417 488 aaKnown RBP3.99□□□□□ -1.77
UBC9YDL064W RPB2P08518 1224 aaKnown RBP3.99□□□□□ -1.77
UBC9YDL064W SRB5P32585 307 aa3.99□□□□□ -1.77
UBC9YDL064W YEL068CP39977 110 aa3.99□□□□□ -1.77
UBC9YDL064W IRC7P43623 340 aa3.99□□□□□ -1.77
UBC9YDL064W OPY2Q06810 360 aa3.99□□□□□ -1.77
UBC9YDL064W NKP1Q12493 238 aa3.99□□□□□ -1.77
UBC9YDL064W GAL4P04386 881 aa3.98□□□□□ -1.77
UBC9YDL064W SUI3P09064 285 aaKnown RBP3.98□□□□□ -1.77
UBC9YDL064W ALY1P36117 915 aa3.98□□□□□ -1.77
UBC9YDL064W NTR2P36118 322 aaPredicted RBP3.98□□□□□ -1.77
UBC9YDL064W YJR061WP40355 935 aa3.98□□□□□ -1.77
UBC9YDL064W XBP1P40489 647 aa3.98□□□□□ -1.77
UBC9YDL064W IME4P41833 600 aa3.98□□□□□ -1.77
UBC9YDL064W SIP4P46954 829 aa3.98□□□□□ -1.77
UBC9YDL064W PIL1P53252 339 aaKnown RBP3.98□□□□□ -1.77
UBC9YDL064W INN1P53901 409 aa3.98□□□□□ -1.77
UBC9YDL064W YNL058CP53947 316 aa3.98□□□□□ -1.77
UBC9YDL064W FCP1Q03254 732 aa3.98□□□□□ -1.77
UBC9YDL064W ENT4Q07872 247 aa3.98□□□□□ -1.77
UBC9YDL064W GPN2Q08726 347 aaPredicted RBP3.98□□□□□ -1.77
UBC9YDL064W CHO1P08456 276 aa3.97□□□□□ -1.77
UBC9YDL064W PET111P08468 800 aa3.97□□□□□ -1.77
UBC9YDL064W ILS1P09436 1072 aaKnown RBP3.97□□□□□ -1.77
UBC9YDL064W TFC3P34111 1160 aa3.97□□□□□ -1.77
UBC9YDL064W SEC24P40482 926 aaKnown RBP3.97□□□□□ -1.77
UBC9YDL064W MNT3P40549 630 aa3.97□□□□□ -1.77
UBC9YDL064W LYS14P40971 790 aa3.97□□□□□ -1.77
UBC9YDL064W YGL036WP53185 909 aaPredicted RBP3.97□□□□□ -1.77
UBC9YDL064W DCP2P53550 970 aaKnown RBP3.97□□□□□ -1.77
UBC9YDL064W IDP3P53982 420 aaKnown RBP3.97□□□□□ -1.77
UBC9YDL064W SEG1Q04279 960 aa3.97□□□□□ -1.77
UBC9YDL064W RCO1Q04779 684 aa3.97□□□□□ -1.77
UBC9YDL064W ORM2Q06144 216 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms