RNA–Protein interactions for RNA: ENSMUST00000185927.1

Hmgb1-rs16-201, mousemouse

BASIC

Gene Hmgb1-rs16, Length 613 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-rs16-201ENSMUST00000185927 Gm10642Q3TWM1 71 aa1.58□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 ZanO88799 5376 aa1.57□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Cox6a2P43023 97 aa1.57□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Rpl37Q9D823 97 aa1.57□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Cox7bP56393 80 aa1.56□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Wfdc13Q5DQQ6 81 aa1.55□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Rpl39lQ9CQD0 51 aa1.54□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Hmcn1D3YXG0 5634 aa1.54□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Rps29P62274 56 aa1.53□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Cox6b2Q80ZN9 88 aa1.53□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Fat4Q2PZL6 4981 aa1.53□□□□□ -2.16
Hmgb1-rs16-201ENSMUST00000185927 Gm10061D3Z714 54 aa1.51□□□□□ -2.17
Hmgb1-rs16-201ENSMUST00000185927 Gm10139O88245 57 aa1.5□□□□□ -2.17
Hmgb1-rs16-201ENSMUST00000185927 Rnf213E9Q555 5152 aaKnown RBP1.5□□□□□ -2.17
Hmgb1-rs16-201ENSMUST00000185927 1700018G05RikA0A1B0GSI2 66 aa1.49□□□□□ -2.17
Hmgb1-rs16-201ENSMUST00000185927 Spaca4Q80ZQ0 127 aa1.49□□□□□ -2.17
Hmgb1-rs16-201ENSMUST00000185927 CriptO70333 101 aa1.48□□□□□ -2.17
Hmgb1-rs16-201ENSMUST00000185927 4933428G20RikQ9D3X4 101 aa1.48□□□□□ -2.17
Hmgb1-rs16-201ENSMUST00000185927 Gm3880A0A1B0GSB3 72 aa1.45□□□□□ -2.18
Hmgb1-rs16-201ENSMUST00000185927 Gm10382Q3V0T5 144 aa1.45□□□□□ -2.18
Hmgb1-rs16-201ENSMUST00000185927 Gm20537G3UYK7 97 aa1.44□□□□□ -2.18
Hmgb1-rs16-201ENSMUST00000185927 Syne2Q6ZWQ0 6874 aaKnown RBP1.44□□□□□ -2.18
Hmgb1-rs16-201ENSMUST00000185927 Krtap19-1Q925H2 87 aa1.43□□□□□ -2.18
Hmgb1-rs16-201ENSMUST00000185927 Gm16253D3Z167 63 aa1.42□□□□□ -2.18
Hmgb1-rs16-201ENSMUST00000185927 2310079G19RikQ9D6L6 185 aa1.41□□□□□ -2.18
Hmgb1-rs16-201ENSMUST00000185927 SspoQ8CG65 4998 aa1.4□□□□□ -2.19
Hmgb1-rs16-201ENSMUST00000185927 Krtap13-1Q8K198 168 aa1.38□□□□□ -2.19
Hmgb1-rs16-201ENSMUST00000185927 Muc5bE9Q5I3 4800 aa1.36□□□□□ -2.19
Hmgb1-rs16-201ENSMUST00000185927 Mdn1A2ANY6 5589 aaKnown RBP1.36□□□□□ -2.19
Hmgb1-rs16-201ENSMUST00000185927 Gm9955Q8CEJ8 102 aa1.32□□□□□ -2.2
Hmgb1-rs16-201ENSMUST00000185927 Defb38Q7TNV7 63 aa1.31□□□□□ -2.2
Hmgb1-rs16-201ENSMUST00000185927 Fsip2A2ARZ3 6995 aa1.31□□□□□ -2.2
Hmgb1-rs16-201ENSMUST00000185927 Gm10999F6Q4M4 69 aa1.3□□□□□ -2.2
Hmgb1-rs16-201ENSMUST00000185927 Krtap19-2Q925I0 141 aa1.3□□□□□ -2.2
Hmgb1-rs16-201ENSMUST00000185927 Gm6358A0A087WPH4 74 aa1.26□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Krtap6-3A0A087WQL6 57 aa1.26□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Defb1P56386 69 aa1.26□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Gm10024A0A0A0MQA4 119 aa1.25□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Gm19426M0QWC7 77 aa1.25□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Mt4P47945 62 aa1.25□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Sprr2a3Q4KL71 83 aa1.25□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Krtap21-1Q925H4 128 aa1.25□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Sprr2a1Q9CQK8 83 aa1.25□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Gm17606F6ZL36 78 aa1.23□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 1110025L11RikO09048 78 aa1.23□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Sprr2iO70560 76 aa1.23□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Krtap19-9aF8WH65 55 aa1.22□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Gpr98Q8VHN7 6298 aaKnown RBP1.22□□□□□ -2.21
Hmgb1-rs16-201ENSMUST00000185927 Sprr2kO70562 68 aa1.21□□□□□ -2.22
Hmgb1-rs16-201ENSMUST00000185927 DstQ91ZU6 7393 aaKnown RBP1.19□□□□□ -2.22
Hmgb1-rs16-201ENSMUST00000185927 Eppk1Q8R0W0 6548 aa1.18□□□□□ -2.22
Hmgb1-rs16-201ENSMUST00000185927 Krtap8-1O08633 61 aa1.18□□□□□ -2.22
Hmgb1-rs16-201ENSMUST00000185927 Mt2P02798 61 aa1.17□□□□□ -2.22
Hmgb1-rs16-201ENSMUST00000185927 BC029722A0A0N4SW31 51 aa1.16□□□□□ -2.22
Hmgb1-rs16-201ENSMUST00000185927 Krtap20-2E9Q0A8 60 aa1.16□□□□□ -2.22
Hmgb1-rs16-201ENSMUST00000185927 Macf1Q9QXZ0 7354 aaKnown RBP1.15□□□□□ -2.22
Hmgb1-rs16-201ENSMUST00000185927 Sprr2gO70558 76 aa1.15□□□□□ -2.23
Hmgb1-rs16-201ENSMUST00000185927 Spink7Q6IE32 76 aa1.15□□□□□ -2.23
Hmgb1-rs16-201ENSMUST00000185927 Krtap22-2J3QNX6 67 aa1.13□□□□□ -2.23
Hmgb1-rs16-201ENSMUST00000185927 Sprr2fO70557 76 aa1.13□□□□□ -2.23
Hmgb1-rs16-201ENSMUST00000185927 Gm11639A0A1D5RLM8 5808 aa1.13□□□□□ -2.23
Hmgb1-rs16-201ENSMUST00000185927 2310046K23RikA0A0A6YVW6 87 aa1.11□□□□□ -2.23
Hmgb1-rs16-201ENSMUST00000185927 Tnp1P10856 55 aa1.11□□□□□ -2.23
Hmgb1-rs16-201ENSMUST00000185927 Gm17402F6Z0L5 76 aa1.04□□□□□ -2.24
Hmgb1-rs16-201ENSMUST00000185927 Muc19Q6PZE0 7524 aa1.02□□□□□ -2.25
Hmgb1-rs16-201ENSMUST00000185927 Krtap19-9bQ99NG9 58 aa1.01□□□□□ -2.25
Hmgb1-rs16-201ENSMUST00000185927 Krtap19-4Q925H7 84 aa0.99□□□□□ -2.25
Hmgb1-rs16-201ENSMUST00000185927 NebE9Q1W3 7152 aa0.98□□□□□ -2.25
Hmgb1-rs16-201ENSMUST00000185927 Lce3bQ9CQM7 98 aa0.96□□□□□ -2.26
Hmgb1-rs16-201ENSMUST00000185927 Sprr2eO70556 76 aa0.95□□□□□ -2.26
Hmgb1-rs16-201ENSMUST00000185927 Syne1Q6ZWR6 8799 aa0.94□□□□□ -2.26
Hmgb1-rs16-201ENSMUST00000185927 Gm11938Q9D3H4 131 aa0.89□□□□□ -2.27
Hmgb1-rs16-201ENSMUST00000185927 Mt1P02802 61 aaKnown RBP0.88□□□□□ -2.27
Hmgb1-rs16-201ENSMUST00000185927 AhnakE9Q616 5656 aaKnown RBP0.85□□□□□ -2.27
Hmgb1-rs16-201ENSMUST00000185927 Sprr2dO70555 85 aa0.85□□□□□ -2.27
Hmgb1-rs16-201ENSMUST00000185927 Sprr2hO70559 108 aa0.82□□□□□ -2.28
Hmgb1-rs16-201ENSMUST00000185927 ObscnA2AAJ9 8891 aaKnown RBP0.81□□□□□ -2.28
Hmgb1-rs16-201ENSMUST00000185927 Muc16A0A140LJ72 8478 aa0.68□□□□□ -2.3
Hmgb1-rs16-201ENSMUST00000185927 Sprr2bO70554 98 aa0.55□□□□□ -2.32
Hmgb1-rs16-201ENSMUST00000185927 Phgr1Q8K0G7 91 aa0.46□□□□□ -2.34
Retrieved 80 of 22,080 RNA–protein pairs in 56.8 ms