RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Sec61bQ9CQS8 96 aaKnown RBP7.81□□□□□ -1.16
Ldb3-208ENSMUST00000228044 Gm12216A0A1W2P827 62 aa7.79□□□□□ -1.16
Ldb3-208ENSMUST00000228044 Herc1E9PZP8 4859 aa7.78□□□□□ -1.16
Ldb3-208ENSMUST00000228044 2310057N15RikQ9D6T8 200 aa7.77□□□□□ -1.17
Ldb3-208ENSMUST00000228044 2210017I01RikA0A0A6YVV1 95 aa7.69□□□□□ -1.18
Ldb3-208ENSMUST00000228044 Krtap3-1A2A591 98 aa7.63□□□□□ -1.19
Ldb3-208ENSMUST00000228044 Gm17606F6ZL36 78 aa7.62□□□□□ -1.19
Ldb3-208ENSMUST00000228044 Krtap13-1Q8K198 168 aa7.59□□□□□ -1.19
Ldb3-208ENSMUST00000228044 Gm20538F6Z9R1 75 aa7.57□□□□□ -1.2
Ldb3-208ENSMUST00000228044 Gm18596A0A1W2P860 280 aa7.56□□□□□ -1.2
Ldb3-208ENSMUST00000228044 Gm10382Q3V0T5 144 aa7.56□□□□□ -1.2
Ldb3-208ENSMUST00000228044 Krtap16-3Q8C1I6 86 aa7.55□□□□□ -1.2
Ldb3-208ENSMUST00000228044 Ush2AQ2QI47 5193 aa7.5□□□□□ -1.21
Ldb3-208ENSMUST00000228044 Crct1Q6PAI5 102 aa7.49□□□□□ -1.21
Ldb3-208ENSMUST00000228044 Krtap19-1Q925H2 87 aa7.49□□□□□ -1.21
Ldb3-208ENSMUST00000228044 Fam229aB2KGE5 128 aa7.47□□□□□ -1.21
Ldb3-208ENSMUST00000228044 Krtap1-5A2A590 122 aa7.47□□□□□ -1.21
Ldb3-208ENSMUST00000228044 Mp68P56379 58 aa7.46□□□□□ -1.22
Ldb3-208ENSMUST00000228044 Gm9789Q8BIG3 52 aa7.45□□□□□ -1.22
Ldb3-208ENSMUST00000228044 Hmcn2A2AJ76 5100 aa7.44□□□□□ -1.22
Ldb3-208ENSMUST00000228044 Krtap19-3Q925H6 87 aa7.44□□□□□ -1.22
Ldb3-208ENSMUST00000228044 Prm1P02319 51 aa7.42□□□□□ -1.22
Ldb3-208ENSMUST00000228044 Gm10318A0A1W2P728 225 aa7.39□□□□□ -1.23
Ldb3-208ENSMUST00000228044 Gm9955Q8CEJ8 102 aa7.39□□□□□ -1.23
Ldb3-208ENSMUST00000228044 Romo1P60603 79 aa7.38□□□□□ -1.23
Ldb3-208ENSMUST00000228044 Gm7735D3YX18 52 aa7.37□□□□□ -1.23
Ldb3-208ENSMUST00000228044 Krtap1-3A2A588 173 aa7.36□□□□□ -1.23
Ldb3-208ENSMUST00000228044 Gm20537G3UYK7 97 aa7.36□□□□□ -1.23
Ldb3-208ENSMUST00000228044 BC029722A0A0N4SW31 51 aa7.31□□□□□ -1.24
Ldb3-208ENSMUST00000228044 Ubr4A2AN08 5180 aa7.3□□□□□ -1.24
Ldb3-208ENSMUST00000228044 Gm21887J3QQ04 176 aa7.3□□□□□ -1.24
Ldb3-208ENSMUST00000228044 Gm19402J3QJV4 266 aa7.28□□□□□ -1.24
Ldb3-208ENSMUST00000228044 4932415D10RikA0A1W2P6U8 4986 aa7.25□□□□□ -1.25
Ldb3-208ENSMUST00000228044 ZanO88799 5376 aa7.22□□□□□ -1.25
Ldb3-208ENSMUST00000228044 LorP18165 486 aa7.15□□□□□ -1.27
Ldb3-208ENSMUST00000228044 Gm3880A0A1B0GSB3 72 aa7.13□□□□□ -1.27
Ldb3-208ENSMUST00000228044 Gm19426M0QWC7 77 aa7.13□□□□□ -1.27
Ldb3-208ENSMUST00000228044 Krtap1-4Q3V2D6 188 aa7.13□□□□□ -1.27
Ldb3-208ENSMUST00000228044 Rnf213E9Q555 5152 aaKnown RBP7.03□□□□□ -1.28
Ldb3-208ENSMUST00000228044 Fat4Q2PZL6 4981 aa7.02□□□□□ -1.29
Ldb3-208ENSMUST00000228044 Gm17402F6Z0L5 76 aa7.02□□□□□ -1.29
Ldb3-208ENSMUST00000228044 B930094E09RikQ8C4T2 136 aa7□□□□□ -1.29
Ldb3-208ENSMUST00000228044 Spink7Q6IE32 76 aa6.96□□□□□ -1.29
Ldb3-208ENSMUST00000228044 CriptO70333 101 aa6.93□□□□□ -1.3
Ldb3-208ENSMUST00000228044 Sprr2a3Q4KL71 83 aa6.91□□□□□ -1.3
Ldb3-208ENSMUST00000228044 Sprr2a1Q9CQK8 83 aa6.91□□□□□ -1.3
Ldb3-208ENSMUST00000228044 Prm2P07978 107 aa6.87□□□□□ -1.31
Ldb3-208ENSMUST00000228044 Lce1jD3YUU5 139 aa6.84□□□□□ -1.31
Ldb3-208ENSMUST00000228044 Krtap12-1Q9Z287 130 aa6.82□□□□□ -1.32
Ldb3-208ENSMUST00000228044 SspoQ8CG65 4998 aa6.78□□□□□ -1.32
Ldb3-208ENSMUST00000228044 Ndufaf8A2AMZ4 74 aa6.75□□□□□ -1.33
Ldb3-208ENSMUST00000228044 Krtap19-9aF8WH65 55 aa6.75□□□□□ -1.33
Ldb3-208ENSMUST00000228044 Gm10061D3Z714 54 aa6.66□□□□□ -1.34
Ldb3-208ENSMUST00000228044 Krtap19-2Q925I0 141 aa6.62□□□□□ -1.35
Ldb3-208ENSMUST00000228044 Krtap17-1A2A5X6 109 aa6.62□□□□□ -1.35
Ldb3-208ENSMUST00000228044 Gm40193A0A1B0GT39 78 aa6.58□□□□□ -1.36
Ldb3-208ENSMUST00000228044 Krtap9-5A2A5X3 358 aa6.58□□□□□ -1.36
Ldb3-208ENSMUST00000228044 Gm19668J3QMD1 248 aa6.53□□□□□ -1.36
Ldb3-208ENSMUST00000228044 Krtap7-1Q9D3I6 87 aa6.5□□□□□ -1.37
Ldb3-208ENSMUST00000228044 Camk2n1Q6QWF9 78 aa6.45□□□□□ -1.38
Ldb3-208ENSMUST00000228044 Lce1iQ9D6P5 149 aa6.43□□□□□ -1.38
Ldb3-208ENSMUST00000228044 Lce1a2Q9D1K4 149 aa6.35□□□□□ -1.39
Ldb3-208ENSMUST00000228044 Gm9112A2AI92 75 aa6.33□□□□□ -1.4
Ldb3-208ENSMUST00000228044 Gm11569B1AQB1 180 aa6.32□□□□□ -1.4
Ldb3-208ENSMUST00000228044 Muc5bE9Q5I3 4800 aa6.3□□□□□ -1.4
Ldb3-208ENSMUST00000228044 Gm6358A0A087WPH4 74 aa6.25□□□□□ -1.41
Ldb3-208ENSMUST00000228044 A0A1Y7VJH8 109 aa6.2□□□□□ -1.42
Ldb3-208ENSMUST00000228044 Krtap8-1O08633 61 aa6.19□□□□□ -1.42
Ldb3-208ENSMUST00000228044 Krtap19-9bQ99NG9 58 aa6.13□□□□□ -1.43
Ldb3-208ENSMUST00000228044 Mt2P02798 61 aa6.11□□□□□ -1.43
Ldb3-208ENSMUST00000228044 Krtap28-10A0A1Y7VP58 119 aa5.91□□□□□ -1.46
Ldb3-208ENSMUST00000228044 Tnp1P10856 55 aa5.89□□□□□ -1.47
Ldb3-208ENSMUST00000228044 Gm11562A0PK51 136 aa5.82□□□□□ -1.48
Ldb3-208ENSMUST00000228044 Gm11555B1AQ89 175 aa5.81□□□□□ -1.48
Ldb3-208ENSMUST00000228044 Krtap9-3Q3V2C1 136 aa5.81□□□□□ -1.48
Ldb3-208ENSMUST00000228044 Mdn1A2ANY6 5589 aaKnown RBP5.8□□□□□ -1.48
Ldb3-208ENSMUST00000228044 Krtap22-2J3QNX6 67 aa5.78□□□□□ -1.48
Ldb3-208ENSMUST00000228044 Lce1gQ9D195 139 aa5.78□□□□□ -1.48
Ldb3-208ENSMUST00000228044 Lce1hQ9D6R3 140 aa5.76□□□□□ -1.49
Ldb3-208ENSMUST00000228044 Krtap4-2B1AQ85 167 aa5.75□□□□□ -1.49
Ldb3-208ENSMUST00000228044 Krtap4-6Q3V4B7 195 aa5.75□□□□□ -1.49
Ldb3-208ENSMUST00000228044 A0A1Y7VLE6 161 aa5.72□□□□□ -1.49
Ldb3-208ENSMUST00000228044 Krtap4-1Q3UUY3 169 aa5.64□□□□□ -1.51
Ldb3-208ENSMUST00000228044 Krtap28-13A0A087WQP5 138 aa5.63□□□□□ -1.51
Ldb3-208ENSMUST00000228044 2310046K23RikA0A0A6YVW6 87 aa5.62□□□□□ -1.51
Ldb3-208ENSMUST00000228044 Gm11596B1AQB0 205 aa5.62□□□□□ -1.51
Ldb3-208ENSMUST00000228044 A030005L19RikA0A1Y7VIU2 113 aa5.49□□□□□ -1.53
Ldb3-208ENSMUST00000228044 Syne2Q6ZWQ0 6874 aaKnown RBP5.49□□□□□ -1.53
Ldb3-208ENSMUST00000228044 Gm11564A2A4L9 201 aa5.47□□□□□ -1.53
Ldb3-208ENSMUST00000228044 Gm11563B1AQ90 168 aa5.47□□□□□ -1.53
Ldb3-208ENSMUST00000228044 Gm11595B1AQA7 289 aa5.47□□□□□ -1.53
Ldb3-208ENSMUST00000228044 Krtap4-8B1AQA8 209 aa5.47□□□□□ -1.53
Ldb3-208ENSMUST00000228044 A030005K14RikA0A1Y7VNY1 122 aa5.45□□□□□ -1.54
Ldb3-208ENSMUST00000228044 Gm10272F7CZ33 110 aa5.35□□□□□ -1.55
Ldb3-208ENSMUST00000228044 Mt4P47945 62 aa5.34□□□□□ -1.55
Ldb3-208ENSMUST00000228044 Krtap4-9B1AQA9 244 aa5.33□□□□□ -1.56
Ldb3-208ENSMUST00000228044 Gm7544A0A1Y7VJ58 118 aa5.32□□□□□ -1.56
Ldb3-208ENSMUST00000228044 Lce1bQ9D149 137 aa5.3□□□□□ -1.56
Ldb3-208ENSMUST00000228044 Gm38119A0A0A6YX29 146 aa5.2□□□□□ -1.58
Ldb3-208ENSMUST00000228044 Gm11938Q9D3H4 131 aa5.13□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms