RNA–Protein interactions for RNA: ENSMUST00000218866.1

Smc6-208, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

TSL 1 (best) BASIC

Gene Smc6, Length 3,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-208ENSMUST00000218866 Gm19426M0QWC7 77 aa6.73□□□□□ -1.33
Smc6-208ENSMUST00000218866 2310057N15RikQ9D6T8 200 aa6.71□□□□□ -1.34
Smc6-208ENSMUST00000218866 Gm17416Q30KP4 66 aa6.67□□□□□ -1.34
Smc6-208ENSMUST00000218866 Dnah8Q91XQ0 4731 aa6.67□□□□□ -1.34
Smc6-208ENSMUST00000218866 Ndufaf8A2AMZ4 74 aa6.65□□□□□ -1.34
Smc6-208ENSMUST00000218866 B930094E09RikQ8C4T2 136 aa6.65□□□□□ -1.34
Smc6-208ENSMUST00000218866 2210017I01RikA0A0A6YVV1 95 aa6.62□□□□□ -1.35
Smc6-208ENSMUST00000218866 Ryr1E9PZQ0 5035 aa6.61□□□□□ -1.35
Smc6-208ENSMUST00000218866 BC029722A0A0N4SW31 51 aa6.58□□□□□ -1.36
Smc6-208ENSMUST00000218866 Ryr2E9Q401 4966 aaKnown RBP6.55□□□□□ -1.36
Smc6-208ENSMUST00000218866 Krtap13-1Q8K198 168 aa6.53□□□□□ -1.36
Smc6-208ENSMUST00000218866 HydinQ80W93 5154 aa6.53□□□□□ -1.36
Smc6-208ENSMUST00000218866 Prm2P07978 107 aa6.53□□□□□ -1.36
Smc6-208ENSMUST00000218866 Gm10318A0A1W2P728 225 aa6.52□□□□□ -1.37
Smc6-208ENSMUST00000218866 Gm19402J3QJV4 266 aa6.52□□□□□ -1.37
Smc6-208ENSMUST00000218866 Krtap7-1Q9D3I6 87 aa6.49□□□□□ -1.37
Smc6-208ENSMUST00000218866 Lrp2A2ARV4 4660 aa6.48□□□□□ -1.37
Smc6-208ENSMUST00000218866 Gm19668J3QMD1 248 aa6.48□□□□□ -1.37
Smc6-208ENSMUST00000218866 Kiaa1109A2AAE1 5005 aa6.47□□□□□ -1.37
Smc6-208ENSMUST00000218866 Spink7Q6IE32 76 aa6.4□□□□□ -1.38
Smc6-208ENSMUST00000218866 Herc2Q4U2R1 4836 aa6.39□□□□□ -1.39
Smc6-208ENSMUST00000218866 Crct1Q6PAI5 102 aa6.38□□□□□ -1.39
Smc6-208ENSMUST00000218866 Fam229aB2KGE5 128 aa6.34□□□□□ -1.39
Smc6-208ENSMUST00000218866 Dnhd1D3Z2X2 4750 aa6.28□□□□□ -1.4
Smc6-208ENSMUST00000218866 PcloQ9QYX7 5068 aa6.21□□□□□ -1.42
Smc6-208ENSMUST00000218866 Gm17402F6Z0L5 76 aa6.2□□□□□ -1.42
Smc6-208ENSMUST00000218866 Krtap1-5A2A590 122 aa6.2□□□□□ -1.42
Smc6-208ENSMUST00000218866 Sec61bQ9CQS8 96 aaKnown RBP6.2□□□□□ -1.42
Smc6-208ENSMUST00000218866 Sprr2a3Q4KL71 83 aa6.15□□□□□ -1.42
Smc6-208ENSMUST00000218866 Sprr2a1Q9CQK8 83 aa6.15□□□□□ -1.42
Smc6-208ENSMUST00000218866 Gm40193A0A1B0GT39 78 aa6.14□□□□□ -1.43
Smc6-208ENSMUST00000218866 Camk2n1Q6QWF9 78 aa6.12□□□□□ -1.43
Smc6-208ENSMUST00000218866 Krtap16-3Q8C1I6 86 aa6.08□□□□□ -1.44
Smc6-208ENSMUST00000218866 Gm9112A2AI92 75 aa6.06□□□□□ -1.44
Smc6-208ENSMUST00000218866 Ubr4A2AN08 5180 aa6.03□□□□□ -1.44
Smc6-208ENSMUST00000218866 Birc6O88738 4882 aa6.01□□□□□ -1.45
Smc6-208ENSMUST00000218866 Herc1E9PZP8 4859 aa5.94□□□□□ -1.46
Smc6-208ENSMUST00000218866 Fat4Q2PZL6 4981 aa5.93□□□□□ -1.46
Smc6-208ENSMUST00000218866 Krtap19-1Q925H2 87 aa5.92□□□□□ -1.46
Smc6-208ENSMUST00000218866 Krtap19-3Q925H6 87 aa5.91□□□□□ -1.46
Smc6-208ENSMUST00000218866 Krtap1-4Q3V2D6 188 aa5.87□□□□□ -1.47
Smc6-208ENSMUST00000218866 ZanO88799 5376 aa5.85□□□□□ -1.47
Smc6-208ENSMUST00000218866 Lce1jD3YUU5 139 aa5.76□□□□□ -1.49
Smc6-208ENSMUST00000218866 4932415D10RikA0A1W2P6U8 4986 aa5.76□□□□□ -1.49
Smc6-208ENSMUST00000218866 Tnp1P10856 55 aa5.72□□□□□ -1.49
Smc6-208ENSMUST00000218866 LorP18165 486 aa5.63□□□□□ -1.51
Smc6-208ENSMUST00000218866 Krtap17-1A2A5X6 109 aa5.61□□□□□ -1.51
Smc6-208ENSMUST00000218866 Lce1mQ9CR91 182 aa5.59□□□□□ -1.51
Smc6-208ENSMUST00000218866 Krtap12-1Q9Z287 130 aa5.59□□□□□ -1.51
Smc6-208ENSMUST00000218866 Hmcn2A2AJ76 5100 aa5.58□□□□□ -1.52
Smc6-208ENSMUST00000218866 Rnf213E9Q555 5152 aaKnown RBP5.58□□□□□ -1.52
Smc6-208ENSMUST00000218866 Ush2AQ2QI47 5193 aa5.58□□□□□ -1.52
Smc6-208ENSMUST00000218866 Krtap19-9aF8WH65 55 aa5.55□□□□□ -1.52
Smc6-208ENSMUST00000218866 Krtap1-3A2A588 173 aa5.53□□□□□ -1.52
Smc6-208ENSMUST00000218866 Krtap9-3Q3V2C1 136 aa5.39□□□□□ -1.55
Smc6-208ENSMUST00000218866 Lce1iQ9D6P5 149 aa5.36□□□□□ -1.55
Smc6-208ENSMUST00000218866 Lce1a2Q9D1K4 149 aa5.35□□□□□ -1.55
Smc6-208ENSMUST00000218866 Gm18596A0A1W2P860 280 aa5.35□□□□□ -1.55
Smc6-208ENSMUST00000218866 Krtap8-1O08633 61 aa5.34□□□□□ -1.55
Smc6-208ENSMUST00000218866 Krtap19-9bQ99NG9 58 aa5.3□□□□□ -1.56
Smc6-208ENSMUST00000218866 2310046K23RikA0A0A6YVW6 87 aa5.27□□□□□ -1.57
Smc6-208ENSMUST00000218866 Lce1hQ9D6R3 140 aa5.26□□□□□ -1.57
Smc6-208ENSMUST00000218866 Prm1P02319 51 aa5.24□□□□□ -1.57
Smc6-208ENSMUST00000218866 Krtap9-5A2A5X3 358 aa5.24□□□□□ -1.57
Smc6-208ENSMUST00000218866 Gm9789Q8BIG3 52 aa5.24□□□□□ -1.57
Smc6-208ENSMUST00000218866 Krtap19-2Q925I0 141 aa5.21□□□□□ -1.58
Smc6-208ENSMUST00000218866 Gm7735D3YX18 52 aa5.19□□□□□ -1.58
Smc6-208ENSMUST00000218866 A0A1Y7VJH8 109 aa5.12□□□□□ -1.59
Smc6-208ENSMUST00000218866 Lce1dQ9D731 133 aa5.08□□□□□ -1.6
Smc6-208ENSMUST00000218866 SspoQ8CG65 4998 aa5.07□□□□□ -1.6
Smc6-208ENSMUST00000218866 Mdn1A2ANY6 5589 aaKnown RBP4.99□□□□□ -1.61
Smc6-208ENSMUST00000218866 Krtap28-10A0A1Y7VP58 119 aa4.98□□□□□ -1.61
Smc6-208ENSMUST00000218866 Mt2P02798 61 aa4.95□□□□□ -1.62
Smc6-208ENSMUST00000218866 Lce1eQ9D139 143 aa4.87□□□□□ -1.63
Smc6-208ENSMUST00000218866 Gm6358A0A087WPH4 74 aa4.87□□□□□ -1.63
Smc6-208ENSMUST00000218866 Gm10272F7CZ33 110 aa4.79□□□□□ -1.64
Smc6-208ENSMUST00000218866 A030005L19RikA0A1Y7VIU2 113 aa4.78□□□□□ -1.64
Smc6-208ENSMUST00000218866 Gm7544A0A1Y7VJ58 118 aa4.77□□□□□ -1.65
Smc6-208ENSMUST00000218866 4933428G20RikQ9D3X4 101 aa4.75□□□□□ -1.65
Smc6-208ENSMUST00000218866 Sprr2gO70558 76 aa4.74□□□□□ -1.65
Smc6-208ENSMUST00000218866 Gm11938Q9D3H4 131 aa4.74□□□□□ -1.65
Smc6-208ENSMUST00000218866 Gm10061D3Z714 54 aa4.74□□□□□ -1.65
Smc6-208ENSMUST00000218866 Muc5bE9Q5I3 4800 aa4.73□□□□□ -1.65
Smc6-208ENSMUST00000218866 A0A1Y7VLE6 161 aa4.73□□□□□ -1.65
Smc6-208ENSMUST00000218866 Lce1cQ9D1C5 147 aa4.67□□□□□ -1.66
Smc6-208ENSMUST00000218866 Krtap22-2J3QNX6 67 aa4.59□□□□□ -1.67
Smc6-208ENSMUST00000218866 A030005K14RikA0A1Y7VNY1 122 aa4.59□□□□□ -1.67
Smc6-208ENSMUST00000218866 Sprr2dO70555 85 aa4.58□□□□□ -1.68
Smc6-208ENSMUST00000218866 Krtap28-13A0A087WQP5 138 aa4.55□□□□□ -1.68
Smc6-208ENSMUST00000218866 Gm10100J3QK64 120 aa4.51□□□□□ -1.69
Smc6-208ENSMUST00000218866 Lce1fB9EJP6 147 aa4.49□□□□□ -1.69
Smc6-208ENSMUST00000218866 Lce1a1Q9CQH5 143 aa4.49□□□□□ -1.69
Smc6-208ENSMUST00000218866 Gm11569B1AQB1 180 aa4.47□□□□□ -1.69
Smc6-208ENSMUST00000218866 Lce3bQ9CQM7 98 aa4.46□□□□□ -1.7
Smc6-208ENSMUST00000218866 Syne1Q6ZWR6 8799 aa4.43□□□□□ -1.7
Smc6-208ENSMUST00000218866 Gm10142J3KMP7 120 aa4.39□□□□□ -1.71
Smc6-208ENSMUST00000218866 Gm11562A0PK51 136 aa4.36□□□□□ -1.71
Smc6-208ENSMUST00000218866 Fsip2A2ARZ3 6995 aa4.33□□□□□ -1.72
Smc6-208ENSMUST00000218866 Lce3cQ91V05 98 aa4.31□□□□□ -1.72
Smc6-208ENSMUST00000218866 Lce3dE9Q8V1 98 aa4.27□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 133.1 ms