RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Lce1bQ9D149 137 aa3.2□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Lce1lQ9D1G7 135 aa3.2□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Dnah14A0A140LIJ4 4489 aa3.2□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Gm17402F6Z0L5 76 aa3.19□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Krtap3-1A2A591 98 aa3.18□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Helz2E9QAM5 2947 aaKnown RBP3.18□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Krtap17-1A2A5X6 109 aa3.17□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Lce3dE9Q8V1 98 aa3.17□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Lce1fB9EJP6 147 aa3.15□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Lce1cQ9D1C5 147 aa3.15□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Lce1dQ9D731 133 aa3.15□□□□□ -1.9
Rc3h1-202ENSMUST00000161609 Tenm3Q9WTS6 2715 aa3.15□□□□□ -1.91
Rc3h1-202ENSMUST00000161609 Krtap1-4Q3V2D6 188 aa3.12□□□□□ -1.91
Rc3h1-202ENSMUST00000161609 Lce3aQ497I5 98 aa3.1□□□□□ -1.91
Rc3h1-202ENSMUST00000161609 Dnah10D3YYQ8 4591 aa3.1□□□□□ -1.91
Rc3h1-202ENSMUST00000161609 Ank2Q8C8R3 3898 aa3.09□□□□□ -1.91
Rc3h1-202ENSMUST00000161609 Krtap4-6Q3V4B7 195 aa3.09□□□□□ -1.91
Rc3h1-202ENSMUST00000161609 Krtap19-9bQ99NG9 58 aa3.08□□□□□ -1.92
Rc3h1-202ENSMUST00000161609 Lce1eQ9D139 143 aa3.06□□□□□ -1.92
Rc3h1-202ENSMUST00000161609 Sprr2hO70559 108 aa3.06□□□□□ -1.92
Rc3h1-202ENSMUST00000161609 Gm10100J3QK64 120 aa3.04□□□□□ -1.92
Rc3h1-202ENSMUST00000161609 Gm11569B1AQB1 180 aa3.03□□□□□ -1.92
Rc3h1-202ENSMUST00000161609 Fbn1Q61554 2873 aaKnown RBP3.02□□□□□ -1.93
Rc3h1-202ENSMUST00000161609 Gm10024A0A0A0MQA4 119 aa3.01□□□□□ -1.93
Rc3h1-202ENSMUST00000161609 Muc6Q80T03 2850 aa3□□□□□ -1.93
Rc3h1-202ENSMUST00000161609 Krtap16-3Q8C1I6 86 aa2.99□□□□□ -1.93
Rc3h1-202ENSMUST00000161609 Xirp2Q4U4S6 3784 aa2.99□□□□□ -1.93
Rc3h1-202ENSMUST00000161609 Sprr2dO70555 85 aa2.96□□□□□ -1.94
Rc3h1-202ENSMUST00000161609 SmcpP15265 143 aa2.96□□□□□ -1.94
Rc3h1-202ENSMUST00000161609 Gm10142J3KMP7 120 aa2.93□□□□□ -1.94
Rc3h1-202ENSMUST00000161609 Krtap1-5A2A590 122 aa2.93□□□□□ -1.94
Rc3h1-202ENSMUST00000161609 Sprr2bO70554 98 aa2.89□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Krtap4-1Q3UUY3 169 aa2.89□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 2300003K06RikA2A4M0 262 aa2.88□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Lce1a1Q9CQH5 143 aa2.87□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Lce1a2Q9D1K4 149 aa2.87□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Krtap3-3Q9D7P0 99 aa2.87□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Sprr2a3Q4KL71 83 aa2.87□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Sprr2a1Q9CQK8 83 aa2.87□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Gm11596B1AQB0 205 aa2.86□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 BsnO88737 3942 aa2.86□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Krtap22-2J3QNX6 67 aa2.85□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Krtap19-4Q925H7 84 aa2.85□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Krtap4-13Q9D7P3 165 aa2.84□□□□□ -1.95
Rc3h1-202ENSMUST00000161609 Mt2P02798 61 aa2.83□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 Krtap19-2Q925I0 141 aa2.83□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 Krtap4-9B1AQA9 244 aa2.82□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 Krtap4-7Q9D732 168 aa2.82□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 Gm11564A2A4L9 201 aa2.81□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 Gm11563B1AQ90 168 aa2.81□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 Gm11595B1AQA7 289 aa2.81□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 Krtap4-8B1AQA8 209 aa2.81□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 TnxbO35452 4006 aa2.78□□□□□ -1.96
Rc3h1-202ENSMUST00000161609 PlecQ9QXS1 4691 aaKnown RBP2.77□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Fat1A0A1L1SQU7 4645 aa2.77□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Dnah6E9Q0B6 4144 aa2.76□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Krtap3-2Q9D638 99 aa2.76□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Dnah5Q8VHE6 4621 aa2.76□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Krtap1-3A2A588 173 aa2.76□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Dnah2P0C6F1 4456 aa2.75□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 ApobE9Q414 4505 aa2.73□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Gm11554B1AQB2 190 aa2.72□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Gm7735D3YX18 52 aa2.72□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Dnah11E9Q7N9 4488 aa2.72□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Stard9Q80TF6 4561 aa2.72□□□□□ -1.97
Rc3h1-202ENSMUST00000161609 Prm1P02319 51 aa2.71□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 Mycbp2Q7TPH6 4711 aa2.7□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 SacsQ9JLC8 4582 aa2.7□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 Gm10061D3Z714 54 aa2.7□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 Dync1h1Q9JHU4 4644 aaKnown RBP2.69□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 Dnah9B1AR51 4484 aa2.68□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 Lce1kJ3QP15 125 aa2.68□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 Dnah17Q69Z23 4481 aa2.67□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 Fat3Q8BNA6 4555 aa2.67□□□□□ -1.98
Rc3h1-202ENSMUST00000161609 Kmt2aP55200 3966 aa2.65□□□□□ -1.99
Rc3h1-202ENSMUST00000161609 Krtap19-1Q925H2 87 aa2.64□□□□□ -1.99
Rc3h1-202ENSMUST00000161609 Vps13dB1ART2 4390 aa2.61□□□□□ -1.99
Rc3h1-202ENSMUST00000161609 Vps13bQ80TY5 3993 aa2.59□□□□□ -2
Rc3h1-202ENSMUST00000161609 Krtap9-3Q3V2C1 136 aa2.59□□□□□ -2
Rc3h1-202ENSMUST00000161609 Ryr1E9PZQ0 5035 aa2.57□□□□□ -2
Rc3h1-202ENSMUST00000161609 Gm9789Q8BIG3 52 aa2.55□□□□□ -2
Rc3h1-202ENSMUST00000161609 Lrp1Q91ZX7 4545 aaKnown RBP2.54□□□□□ -2
Rc3h1-202ENSMUST00000161609 PrkdcP97313 4128 aa2.53□□□□□ -2
Rc3h1-202ENSMUST00000161609 Fsip2A2ARZ3 6995 aa2.5□□□□□ -2.01
Rc3h1-202ENSMUST00000161609 Pkd1O08852 4293 aa2.5□□□□□ -2.01
Rc3h1-202ENSMUST00000161609 Krtap4-16Q91W93 202 aa2.49□□□□□ -2.01
Rc3h1-202ENSMUST00000161609 Fat2Q5F226 4351 aa2.47□□□□□ -2.01
Rc3h1-202ENSMUST00000161609 Krtap31-2Q8CAY5 177 aa2.47□□□□□ -2.01
Rc3h1-202ENSMUST00000161609 Krtap31-1Q9D644 177 aa2.47□□□□□ -2.01
Rc3h1-202ENSMUST00000161609 Lrp2A2ARV4 4660 aa2.46□□□□□ -2.02
Rc3h1-202ENSMUST00000161609 Lrp1bQ9JI18 4599 aa2.45□□□□□ -2.02
Rc3h1-202ENSMUST00000161609 Dnah1E9Q8T7 4250 aa2.45□□□□□ -2.02
Rc3h1-202ENSMUST00000161609 Hectd4E9Q2E4 4418 aa2.43□□□□□ -2.02
Rc3h1-202ENSMUST00000161609 Syne2Q6ZWQ0 6874 aaKnown RBP2.43□□□□□ -2.02
Rc3h1-202ENSMUST00000161609 Dync2h1Q45VK7 4306 aa2.43□□□□□ -2.02
Rc3h1-202ENSMUST00000161609 Fras1Q80T14 4010 aa2.41□□□□□ -2.02
Rc3h1-202ENSMUST00000161609 Dnah7bL7N1Y0 4068 aa2.38□□□□□ -2.03
Rc3h1-202ENSMUST00000161609 Ryr3A2AGL3 4863 aa2.36□□□□□ -2.03
Rc3h1-202ENSMUST00000161609 Gm11562A0PK51 136 aa2.35□□□□□ -2.03
Rc3h1-202ENSMUST00000161609 HydinQ80W93 5154 aa2.33□□□□□ -2.04
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms