RNA–Protein interactions for RNA: ENSMUST00000113696.7

Tpm1-212, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-212ENSMUST00000113696 Fat4Q2PZL6 4981 aa9.95□□□□□ -0.82
Tpm1-212ENSMUST00000113696 Gm20661K7N787 53 aa9.94□□□□□ -0.82
Tpm1-212ENSMUST00000113696 Krtap1-4Q3V2D6 188 aa9.92□□□□□ -0.82
Tpm1-212ENSMUST00000113696 Krtap3-1A2A591 98 aa9.9□□□□□ -0.82
Tpm1-212ENSMUST00000113696 Gm17606F6ZL36 78 aa9.88□□□□□ -0.83
Tpm1-212ENSMUST00000113696 Rnf213E9Q555 5152 aaKnown RBP9.87□□□□□ -0.83
Tpm1-212ENSMUST00000113696 Serp1Q9Z1W5 66 aa9.87□□□□□ -0.83
Tpm1-212ENSMUST00000113696 Gm10197F6QEY5 67 aa9.86□□□□□ -0.83
Tpm1-212ENSMUST00000113696 SmcpP15265 143 aa9.85□□□□□ -0.83
Tpm1-212ENSMUST00000113696 H2al1aQ5M8Q2 105 aa9.84□□□□□ -0.83
Tpm1-212ENSMUST00000113696 H2al1eQ810S6 105 aa9.84□□□□□ -0.83
Tpm1-212ENSMUST00000113696 Brk1Q91VR8 75 aa9.83□□□□□ -0.84
Tpm1-212ENSMUST00000113696 Phxr4P15974 95 aa9.76□□□□□ -0.85
Tpm1-212ENSMUST00000113696 Rps28P62858 69 aaKnown RBP9.68□□□□□ -0.86
Tpm1-212ENSMUST00000113696 Uqcr11Q9CPX8 56 aa9.67□□□□□ -0.86
Tpm1-212ENSMUST00000113696 H2al1bA0A087WP11 105 aa9.66□□□□□ -0.86
Tpm1-212ENSMUST00000113696 Gm10382Q3V0T5 144 aa9.66□□□□□ -0.86
Tpm1-212ENSMUST00000113696 Gm19426M0QWC7 77 aa9.62□□□□□ -0.87
Tpm1-212ENSMUST00000113696 BC029722A0A0N4SW31 51 aa9.61□□□□□ -0.87
Tpm1-212ENSMUST00000113696 Gm10061D3Z714 54 aa9.61□□□□□ -0.87
Tpm1-212ENSMUST00000113696 Limd2Q8BGB5 128 aa9.59□□□□□ -0.87
Tpm1-212ENSMUST00000113696 Gm20537G3UYK7 97 aa9.56□□□□□ -0.88
Tpm1-212ENSMUST00000113696 Ndufb1P0DN34 57 aa9.55□□□□□ -0.88
Tpm1-212ENSMUST00000113696 Sec61gP60060 68 aa9.53□□□□□ -0.88
Tpm1-212ENSMUST00000113696 Krtap4-1Q3UUY3 169 aa9.52□□□□□ -0.89
Tpm1-212ENSMUST00000113696 SspoQ8CG65 4998 aa9.52□□□□□ -0.89
Tpm1-212ENSMUST00000113696 Gm9955Q8CEJ8 102 aa9.3□□□□□ -0.92
Tpm1-212ENSMUST00000113696 CriptO70333 101 aa9.28□□□□□ -0.92
Tpm1-212ENSMUST00000113696 Krtap12-1Q9Z287 130 aa9.28□□□□□ -0.92
Tpm1-212ENSMUST00000113696 Spink7Q6IE32 76 aa9.26□□□□□ -0.93
Tpm1-212ENSMUST00000113696 Gm11569B1AQB1 180 aa9.25□□□□□ -0.93
Tpm1-212ENSMUST00000113696 Lce1jD3YUU5 139 aa9.25□□□□□ -0.93
Tpm1-212ENSMUST00000113696 Pcp4P63054 62 aa9.22□□□□□ -0.93
Tpm1-212ENSMUST00000113696 Krtap19-2Q925I0 141 aa9.15□□□□□ -0.94
Tpm1-212ENSMUST00000113696 Krtap9-5A2A5X3 358 aa9.13□□□□□ -0.95
Tpm1-212ENSMUST00000113696 Krtap19-9aF8WH65 55 aa9.13□□□□□ -0.95
Tpm1-212ENSMUST00000113696 Pla2g10Q9QXX3 151 aa9.07□□□□□ -0.96
Tpm1-212ENSMUST00000113696 B930094E09RikQ8C4T2 136 aa9.06□□□□□ -0.96
Tpm1-212ENSMUST00000113696 Krtap17-1A2A5X6 109 aa9.05□□□□□ -0.96
Tpm1-212ENSMUST00000113696 Gm17402F6Z0L5 76 aa9.01□□□□□ -0.97
Tpm1-212ENSMUST00000113696 Prm2P07978 107 aa9.01□□□□□ -0.97
Tpm1-212ENSMUST00000113696 Sox16Q62247 57 aa8.99□□□□□ -0.97
Tpm1-212ENSMUST00000113696 H2al1kJ3QP08 105 aa8.93□□□□□ -0.98
Tpm1-212ENSMUST00000113696 Gm11563B1AQ90 168 aa8.92□□□□□ -0.98
Tpm1-212ENSMUST00000113696 Sprr2a3Q4KL71 83 aa8.92□□□□□ -0.98
Tpm1-212ENSMUST00000113696 Sprr2a1Q9CQK8 83 aa8.92□□□□□ -0.98
Tpm1-212ENSMUST00000113696 Krtap4-7Q9D732 168 aa8.92□□□□□ -0.98
Tpm1-212ENSMUST00000113696 4933415A04RikQ9D443 101 aa8.91□□□□□ -0.98
Tpm1-212ENSMUST00000113696 Muc5bE9Q5I3 4800 aa8.83□□□□□ -1
Tpm1-212ENSMUST00000113696 Gm21887J3QQ04 176 aa8.8□□□□□ -1
Tpm1-212ENSMUST00000113696 Krtap4-2B1AQ85 167 aa8.76□□□□□ -1.01
Tpm1-212ENSMUST00000113696 H2al1mQ9DAD9 105 aa8.74□□□□□ -1.01
Tpm1-212ENSMUST00000113696 Lce1gQ9D195 139 aa8.72□□□□□ -1.01
Tpm1-212ENSMUST00000113696 Ndufs5Q99LY9 106 aa8.71□□□□□ -1.01
Tpm1-212ENSMUST00000113696 Gm11562A0PK51 136 aa8.71□□□□□ -1.02
Tpm1-212ENSMUST00000113696 Gm6358A0A087WPH4 74 aa8.7□□□□□ -1.02
Tpm1-212ENSMUST00000113696 Gm3880A0A1B0GSB3 72 aa8.7□□□□□ -1.02
Tpm1-212ENSMUST00000113696 Lce1iQ9D6P5 149 aa8.68□□□□□ -1.02
Tpm1-212ENSMUST00000113696 Gm10337F7DEP7 55 aa8.65□□□□□ -1.03
Tpm1-212ENSMUST00000113696 Gm11555B1AQ89 175 aa8.62□□□□□ -1.03
Tpm1-212ENSMUST00000113696 Gm3646F6S692 53 aa8.55□□□□□ -1.04
Tpm1-212ENSMUST00000113696 Gm19668J3QMD1 248 aa8.55□□□□□ -1.04
Tpm1-212ENSMUST00000113696 Lce1a2Q9D1K4 149 aa8.54□□□□□ -1.04
Tpm1-212ENSMUST00000113696 Krtap4-6Q3V4B7 195 aa8.46□□□□□ -1.06
Tpm1-212ENSMUST00000113696 Syne2Q6ZWQ0 6874 aaKnown RBP8.43□□□□□ -1.06
Tpm1-212ENSMUST00000113696 Gm11596B1AQB0 205 aa8.42□□□□□ -1.06
Tpm1-212ENSMUST00000113696 Mt2P02798 61 aa8.4□□□□□ -1.07
Tpm1-212ENSMUST00000113696 Mdn1A2ANY6 5589 aaKnown RBP8.39□□□□□ -1.07
Tpm1-212ENSMUST00000113696 Gm12216A0A1W2P827 62 aa8.39□□□□□ -1.07
Tpm1-212ENSMUST00000113696 Camk2n1Q6QWF9 78 aa8.37□□□□□ -1.07
Tpm1-212ENSMUST00000113696 Romo1P60603 79 aa8.24□□□□□ -1.09
Tpm1-212ENSMUST00000113696 Krtap8-1O08633 61 aa8.17□□□□□ -1.1
Tpm1-212ENSMUST00000113696 Krtap19-9bQ99NG9 58 aa8.1□□□□□ -1.11
Tpm1-212ENSMUST00000113696 Gm11564A2A4L9 201 aa8.09□□□□□ -1.11
Tpm1-212ENSMUST00000113696 Gm11595B1AQA7 289 aa8.09□□□□□ -1.11
Tpm1-212ENSMUST00000113696 Krtap4-8B1AQA8 209 aa8.09□□□□□ -1.11
Tpm1-212ENSMUST00000113696 Krtap22-2J3QNX6 67 aa7.99□□□□□ -1.13
Tpm1-212ENSMUST00000113696 Krtap9-3Q3V2C1 136 aa7.91□□□□□ -1.14
Tpm1-212ENSMUST00000113696 Krtap4-9B1AQA9 244 aa7.86□□□□□ -1.15
Tpm1-212ENSMUST00000113696 A0A1Y7VJH8 109 aa7.84□□□□□ -1.15
Tpm1-212ENSMUST00000113696 Mt4P47945 62 aa7.83□□□□□ -1.16
Tpm1-212ENSMUST00000113696 SvipQ3UZP4 77 aa7.74□□□□□ -1.17
Tpm1-212ENSMUST00000113696 Lce1bQ9D149 137 aa7.64□□□□□ -1.19
Tpm1-212ENSMUST00000113696 Fsip2A2ARZ3 6995 aa7.61□□□□□ -1.19
Tpm1-212ENSMUST00000113696 Krtap31-2Q8CAY5 177 aa7.59□□□□□ -1.19
Tpm1-212ENSMUST00000113696 Krtap4-13Q9D7P3 165 aa7.57□□□□□ -1.2
Tpm1-212ENSMUST00000113696 Gm38119A0A0A6YX29 146 aa7.52□□□□□ -1.21
Tpm1-212ENSMUST00000113696 Krtap28-10A0A1Y7VP58 119 aa7.52□□□□□ -1.21
Tpm1-212ENSMUST00000113696 Krtap7-1Q9D3I6 87 aa7.51□□□□□ -1.21
Tpm1-212ENSMUST00000113696 Sprr2kO70562 68 aa7.49□□□□□ -1.21
Tpm1-212ENSMUST00000113696 Gm40193A0A1B0GT39 78 aa7.48□□□□□ -1.21
Tpm1-212ENSMUST00000113696 Lce1hQ9D6R3 140 aa7.46□□□□□ -1.22
Tpm1-212ENSMUST00000113696 Tnp1P10856 55 aa7.43□□□□□ -1.22
Tpm1-212ENSMUST00000113696 2300003K06RikA2A4M0 262 aa7.41□□□□□ -1.22
Tpm1-212ENSMUST00000113696 A0A1Y7VLE6 161 aa7.39□□□□□ -1.23
Tpm1-212ENSMUST00000113696 Krtap6-3A0A087WQL6 57 aa7.37□□□□□ -1.23
Tpm1-212ENSMUST00000113696 Krtap28-13A0A087WQP5 138 aa7.3□□□□□ -1.24
Tpm1-212ENSMUST00000113696 Krtap31-1Q9D644 177 aa7.23□□□□□ -1.25
Tpm1-212ENSMUST00000113696 Lce1lQ9D1G7 135 aa7.19□□□□□ -1.26
Tpm1-212ENSMUST00000113696 Gm10272F7CZ33 110 aa7.13□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 87.8 ms