RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Birc6O88738 4882 aa3.95□□□□□ -1.78
Chm-202ENSMUST00000113388 Dnah8Q91XQ0 4731 aa3.95□□□□□ -1.78
Chm-202ENSMUST00000113388 Lrp1Q91ZX7 4545 aaKnown RBP3.94□□□□□ -1.78
Chm-202ENSMUST00000113388 PcloQ9QYX7 5068 aa3.94□□□□□ -1.78
Chm-202ENSMUST00000113388 Lrp1bQ9JI18 4599 aa3.93□□□□□ -1.78
Chm-202ENSMUST00000113388 Krtap29-1A2A5X4 342 aa3.92□□□□□ -1.78
Chm-202ENSMUST00000113388 Fat3Q8BNA6 4555 aa3.89□□□□□ -1.79
Chm-202ENSMUST00000113388 Dnhd1D3Z2X2 4750 aa3.87□□□□□ -1.79
Chm-202ENSMUST00000113388 2310079G19RikQ9D6L6 185 aa3.87□□□□□ -1.79
Chm-202ENSMUST00000113388 Herc1E9PZP8 4859 aa3.86□□□□□ -1.79
Chm-202ENSMUST00000113388 Gm6217A0A1Y7VJK9 128 aa3.86□□□□□ -1.79
Chm-202ENSMUST00000113388 A030005K14RikA0A1Y7VNY1 122 aa3.86□□□□□ -1.79
Chm-202ENSMUST00000113388 Krtap19-5O08632 62 aa3.86□□□□□ -1.79
Chm-202ENSMUST00000113388 Mycbp2Q7TPH6 4711 aa3.85□□□□□ -1.79
Chm-202ENSMUST00000113388 NbdyA0A0N4SUI7 68 aa3.85□□□□□ -1.79
Chm-202ENSMUST00000113388 Gm7544A0A1Y7VJ58 118 aa3.85□□□□□ -1.79
Chm-202ENSMUST00000113388 Hectd4E9Q2E4 4418 aa3.84□□□□□ -1.79
Chm-202ENSMUST00000113388 Vps13bQ80TY5 3993 aa3.84□□□□□ -1.79
Chm-202ENSMUST00000113388 Lrp2A2ARV4 4660 aa3.83□□□□□ -1.8
Chm-202ENSMUST00000113388 Lce1mQ9CR91 182 aa3.82□□□□□ -1.8
Chm-202ENSMUST00000113388 Fat2Q5F226 4351 aa3.81□□□□□ -1.8
Chm-202ENSMUST00000113388 A930033H14RikG5E8X6 103 aa3.81□□□□□ -1.8
Chm-202ENSMUST00000113388 Gm9736A0A1W2P7N1 277 aa3.8□□□□□ -1.8
Chm-202ENSMUST00000113388 Gm18596A0A1W2P860 280 aa3.79□□□□□ -1.8
Chm-202ENSMUST00000113388 B930094E09RikQ8C4T2 136 aa3.77□□□□□ -1.81
Chm-202ENSMUST00000113388 Pkhd1l1Q80ZA4 4249 aa3.75□□□□□ -1.81
Chm-202ENSMUST00000113388 Spink7Q6IE32 76 aa3.68□□□□□ -1.82
Chm-202ENSMUST00000113388 BC029722A0A0N4SW31 51 aa3.66□□□□□ -1.82
Chm-202ENSMUST00000113388 Gm17416Q30KP4 66 aa3.64□□□□□ -1.83
Chm-202ENSMUST00000113388 A0A1Y7VJ07 166 aa3.61□□□□□ -1.83
Chm-202ENSMUST00000113388 Ush2AQ2QI47 5193 aa3.61□□□□□ -1.83
Chm-202ENSMUST00000113388 Krtap7-1Q9D3I6 87 aa3.61□□□□□ -1.83
Chm-202ENSMUST00000113388 Ubr4A2AN08 5180 aa3.61□□□□□ -1.83
Chm-202ENSMUST00000113388 Tnp1P10856 55 aa3.58□□□□□ -1.84
Chm-202ENSMUST00000113388 4932415D10RikA0A1W2P6U8 4986 aa3.56□□□□□ -1.84
Chm-202ENSMUST00000113388 Krtap17-1A2A5X6 109 aa3.55□□□□□ -1.84
Chm-202ENSMUST00000113388 Hmcn2A2AJ76 5100 aa3.53□□□□□ -1.84
Chm-202ENSMUST00000113388 Gm5767A0A0J9YTU8 78 aa3.52□□□□□ -1.85
Chm-202ENSMUST00000113388 Gm19668J3QMD1 248 aa3.51□□□□□ -1.85
Chm-202ENSMUST00000113388 Crct1Q6PAI5 102 aa3.49□□□□□ -1.85
Chm-202ENSMUST00000113388 Gm7735D3YX18 52 aa3.49□□□□□ -1.85
Chm-202ENSMUST00000113388 Prm1P02319 51 aa3.47□□□□□ -1.85
Chm-202ENSMUST00000113388 Gm9789Q8BIG3 52 aa3.45□□□□□ -1.86
Chm-202ENSMUST00000113388 Krtap3-2Q9D638 99 aa3.44□□□□□ -1.86
Chm-202ENSMUST00000113388 Krtap3-3Q9D7P0 99 aa3.44□□□□□ -1.86
Chm-202ENSMUST00000113388 Krtap13-1Q8K198 168 aa3.44□□□□□ -1.86
Chm-202ENSMUST00000113388 Rps29P62274 56 aa3.44□□□□□ -1.86
Chm-202ENSMUST00000113388 Gm10318A0A1W2P728 225 aa3.43□□□□□ -1.86
Chm-202ENSMUST00000113388 Gm11939A2A592 99 aa3.4□□□□□ -1.86
Chm-202ENSMUST00000113388 Gm17402F6Z0L5 76 aa3.36□□□□□ -1.87
Chm-202ENSMUST00000113388 ZanO88799 5376 aa3.36□□□□□ -1.87
Chm-202ENSMUST00000113388 Krtap4-1Q3UUY3 169 aa3.36□□□□□ -1.87
Chm-202ENSMUST00000113388 LorP18165 486 aa3.34□□□□□ -1.87
Chm-202ENSMUST00000113388 Fat4Q2PZL6 4981 aa3.34□□□□□ -1.88
Chm-202ENSMUST00000113388 Krtap1-3A2A588 173 aa3.32□□□□□ -1.88
Chm-202ENSMUST00000113388 2210017I01RikA0A0A6YVV1 95 aa3.31□□□□□ -1.88
Chm-202ENSMUST00000113388 A030014E15RikA0A1Y7VJV2 120 aa3.3□□□□□ -1.88
Chm-202ENSMUST00000113388 Rnf213E9Q555 5152 aaKnown RBP3.27□□□□□ -1.89
Chm-202ENSMUST00000113388 Gm19402J3QJV4 266 aa3.25□□□□□ -1.89
Chm-202ENSMUST00000113388 Krtap3-1A2A591 98 aa3.24□□□□□ -1.89
Chm-202ENSMUST00000113388 Gm11562A0PK51 136 aa3.23□□□□□ -1.89
Chm-202ENSMUST00000113388 4933428G20RikQ9D3X4 101 aa3.22□□□□□ -1.89
Chm-202ENSMUST00000113388 Krtap16-3Q8C1I6 86 aa3.21□□□□□ -1.9
Chm-202ENSMUST00000113388 Krtap19-3Q925H6 87 aa3.2□□□□□ -1.9
Chm-202ENSMUST00000113388 Krtap19-1Q925H2 87 aa3.18□□□□□ -1.9
Chm-202ENSMUST00000113388 Gm11555B1AQ89 175 aa3.15□□□□□ -1.9
Chm-202ENSMUST00000113388 Gm10061D3Z714 54 aa3.11□□□□□ -1.91
Chm-202ENSMUST00000113388 Sprr2a3Q4KL71 83 aa3.11□□□□□ -1.91
Chm-202ENSMUST00000113388 Sprr2a1Q9CQK8 83 aa3.11□□□□□ -1.91
Chm-202ENSMUST00000113388 Gm11563B1AQ90 168 aa3.11□□□□□ -1.91
Chm-202ENSMUST00000113388 Krtap4-7Q9D732 168 aa3.11□□□□□ -1.91
Chm-202ENSMUST00000113388 Krtap31-1Q9D644 177 aa3.08□□□□□ -1.92
Chm-202ENSMUST00000113388 Gm11569B1AQB1 180 aa3.07□□□□□ -1.92
Chm-202ENSMUST00000113388 Mdn1A2ANY6 5589 aaKnown RBP3.06□□□□□ -1.92
Chm-202ENSMUST00000113388 SspoQ8CG65 4998 aa3.03□□□□□ -1.92
Chm-202ENSMUST00000113388 Krtap1-4Q3V2D6 188 aa3.02□□□□□ -1.93
Chm-202ENSMUST00000113388 Krtap4-2B1AQ85 167 aa3.01□□□□□ -1.93
Chm-202ENSMUST00000113388 Krtap1-5A2A590 122 aa2.97□□□□□ -1.93
Chm-202ENSMUST00000113388 Lce1gQ9D195 139 aa2.94□□□□□ -1.94
Chm-202ENSMUST00000113388 Krtap9-5A2A5X3 358 aa2.92□□□□□ -1.94
Chm-202ENSMUST00000113388 Syne2Q6ZWQ0 6874 aaKnown RBP2.91□□□□□ -1.94
Chm-202ENSMUST00000113388 Lce1jD3YUU5 139 aa2.91□□□□□ -1.94
Chm-202ENSMUST00000113388 Muc5bE9Q5I3 4800 aa2.88□□□□□ -1.95
Chm-202ENSMUST00000113388 Krtap19-2Q925I0 141 aa2.88□□□□□ -1.95
Chm-202ENSMUST00000113388 Krtap12-1Q9Z287 130 aa2.87□□□□□ -1.95
Chm-202ENSMUST00000113388 Krtap31-2Q8CAY5 177 aa2.87□□□□□ -1.95
Chm-202ENSMUST00000113388 Krtap4-6Q3V4B7 195 aa2.86□□□□□ -1.95
Chm-202ENSMUST00000113388 Gm11596B1AQB0 205 aa2.84□□□□□ -1.95
Chm-202ENSMUST00000113388 2310046K23RikA0A0A6YVW6 87 aa2.81□□□□□ -1.96
Chm-202ENSMUST00000113388 Krtap19-9aF8WH65 55 aa2.79□□□□□ -1.96
Chm-202ENSMUST00000113388 Fsip2A2ARZ3 6995 aa2.76□□□□□ -1.97
Chm-202ENSMUST00000113388 Gm6358A0A087WPH4 74 aa2.75□□□□□ -1.97
Chm-202ENSMUST00000113388 A0A286YCP9 139 aa2.75□□□□□ -1.97
Chm-202ENSMUST00000113388 Gm11564A2A4L9 201 aa2.72□□□□□ -1.97
Chm-202ENSMUST00000113388 Gm11595B1AQA7 289 aa2.72□□□□□ -1.97
Chm-202ENSMUST00000113388 Krtap4-8B1AQA8 209 aa2.72□□□□□ -1.97
Chm-202ENSMUST00000113388 Lce1iQ9D6P5 149 aa2.71□□□□□ -1.98
Chm-202ENSMUST00000113388 Gm10272F7CZ33 110 aa2.68□□□□□ -1.98
Chm-202ENSMUST00000113388 Lce1a2Q9D1K4 149 aa2.67□□□□□ -1.98
Chm-202ENSMUST00000113388 Krtap4-9B1AQA9 244 aa2.66□□□□□ -1.98
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms