RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Gm6358A0A087WPH4 74 aa3.45□□□□□ -1.86
Scn8a-204ENSMUST00000108909 Sprr2a3Q4KL71 83 aa3.43□□□□□ -1.86
Scn8a-204ENSMUST00000108909 Sprr2a1Q9CQK8 83 aa3.43□□□□□ -1.86
Scn8a-204ENSMUST00000108909 Krtap1-5A2A590 122 aa3.41□□□□□ -1.86
Scn8a-204ENSMUST00000108909 Gm19402J3QJV4 266 aa3.41□□□□□ -1.86
Scn8a-204ENSMUST00000108909 Krtap19-9aF8WH65 55 aa3.33□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Dnah17Q69Z23 4481 aa3.33□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Dync2h1Q45VK7 4306 aa3.32□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Dnah5Q8VHE6 4621 aa3.32□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Dnah2P0C6F1 4456 aa3.31□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Ryr1E9PZQ0 5035 aa3.31□□□□□ -1.88
Scn8a-204ENSMUST00000108909 PlecQ9QXS1 4691 aaKnown RBP3.31□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Dnah11E9Q7N9 4488 aa3.3□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Krtap19-9bQ99NG9 58 aa3.29□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Krtap1-4Q3V2D6 188 aa3.28□□□□□ -1.88
Scn8a-204ENSMUST00000108909 Dnah8Q91XQ0 4731 aa3.27□□□□□ -1.89
Scn8a-204ENSMUST00000108909 Dync1h1Q9JHU4 4644 aaKnown RBP3.25□□□□□ -1.89
Scn8a-204ENSMUST00000108909 Gm18596A0A1W2P860 280 aa3.24□□□□□ -1.89
Scn8a-204ENSMUST00000108909 Krtap12-1Q9Z287 130 aa3.23□□□□□ -1.89
Scn8a-204ENSMUST00000108909 Stard9Q80TF6 4561 aa3.23□□□□□ -1.89
Scn8a-204ENSMUST00000108909 ApobE9Q414 4505 aa3.22□□□□□ -1.89
Scn8a-204ENSMUST00000108909 Pkhd1l1Q80ZA4 4249 aa3.22□□□□□ -1.89
Scn8a-204ENSMUST00000108909 Mycbp2Q7TPH6 4711 aa3.21□□□□□ -1.9
Scn8a-204ENSMUST00000108909 SacsQ9JLC8 4582 aa3.2□□□□□ -1.9
Scn8a-204ENSMUST00000108909 Lrp1Q91ZX7 4545 aaKnown RBP3.19□□□□□ -1.9
Scn8a-204ENSMUST00000108909 Krtap8-1O08633 61 aa3.16□□□□□ -1.9
Scn8a-204ENSMUST00000108909 LorP18165 486 aa3.15□□□□□ -1.91
Scn8a-204ENSMUST00000108909 Dnah9B1AR51 4484 aa3.13□□□□□ -1.91
Scn8a-204ENSMUST00000108909 Pkd1O08852 4293 aa3.1□□□□□ -1.91
Scn8a-204ENSMUST00000108909 Lrp1bQ9JI18 4599 aa3.08□□□□□ -1.92
Scn8a-204ENSMUST00000108909 Fat1A0A1L1SQU7 4645 aa3.06□□□□□ -1.92
Scn8a-204ENSMUST00000108909 Gm10100J3QK64 120 aa3.03□□□□□ -1.92
Scn8a-204ENSMUST00000108909 Sprr2kO70562 68 aa2.99□□□□□ -1.93
Scn8a-204ENSMUST00000108909 Gm10272F7CZ33 110 aa2.99□□□□□ -1.93
Scn8a-204ENSMUST00000108909 2310046K23RikA0A0A6YVW6 87 aa2.97□□□□□ -1.93
Scn8a-204ENSMUST00000108909 Lce3bQ9CQM7 98 aa2.97□□□□□ -1.93
Scn8a-204ENSMUST00000108909 Krtap16-3Q8C1I6 86 aa2.95□□□□□ -1.94
Scn8a-204ENSMUST00000108909 Gm10142J3KMP7 120 aa2.95□□□□□ -1.94
Scn8a-204ENSMUST00000108909 Fat3Q8BNA6 4555 aa2.91□□□□□ -1.94
Scn8a-204ENSMUST00000108909 Krtap19-3Q925H6 87 aa2.91□□□□□ -1.94
Scn8a-204ENSMUST00000108909 Fat2Q5F226 4351 aa2.9□□□□□ -1.95
Scn8a-204ENSMUST00000108909 Lce3cQ91V05 98 aa2.89□□□□□ -1.95
Scn8a-204ENSMUST00000108909 Krtap9-5A2A5X3 358 aa2.89□□□□□ -1.95
Scn8a-204ENSMUST00000108909 Lce3eF8VQJ0 98 aa2.87□□□□□ -1.95
Scn8a-204ENSMUST00000108909 Lce3fQ6PAI4 98 aa2.87□□□□□ -1.95
Scn8a-204ENSMUST00000108909 Krtap19-1Q925H2 87 aa2.85□□□□□ -1.95
Scn8a-204ENSMUST00000108909 PcloQ9QYX7 5068 aa2.84□□□□□ -1.95
Scn8a-204ENSMUST00000108909 Kmt2cQ8BRH4 4903 aa2.82□□□□□ -1.96
Scn8a-204ENSMUST00000108909 Lce3dE9Q8V1 98 aa2.82□□□□□ -1.96
Scn8a-204ENSMUST00000108909 Krtap31-1Q9D644 177 aa2.81□□□□□ -1.96
Scn8a-204ENSMUST00000108909 Mt2P02798 61 aa2.8□□□□□ -1.96
Scn8a-204ENSMUST00000108909 Lce3aQ497I5 98 aa2.79□□□□□ -1.96
Scn8a-204ENSMUST00000108909 Lce1mQ9CR91 182 aa2.79□□□□□ -1.96
Scn8a-204ENSMUST00000108909 Sprr2gO70558 76 aa2.77□□□□□ -1.97
Scn8a-204ENSMUST00000108909 Lce1jD3YUU5 139 aa2.75□□□□□ -1.97
Scn8a-204ENSMUST00000108909 Krtap22-2J3QNX6 67 aa2.74□□□□□ -1.97
Scn8a-204ENSMUST00000108909 Ryr3A2AGL3 4863 aa2.74□□□□□ -1.97
Scn8a-204ENSMUST00000108909 ZanO88799 5376 aa2.73□□□□□ -1.97
Scn8a-204ENSMUST00000108909 Dnhd1D3Z2X2 4750 aa2.73□□□□□ -1.97
Scn8a-204ENSMUST00000108909 Krtap9-3Q3V2C1 136 aa2.7□□□□□ -1.98
Scn8a-204ENSMUST00000108909 Gm10024A0A0A0MQA4 119 aa2.67□□□□□ -1.98
Scn8a-204ENSMUST00000108909 Lce1gQ9D195 139 aa2.67□□□□□ -1.98
Scn8a-204ENSMUST00000108909 Lce1iQ9D6P5 149 aa2.67□□□□□ -1.98
Scn8a-204ENSMUST00000108909 Lce1hQ9D6R3 140 aa2.67□□□□□ -1.98
Scn8a-204ENSMUST00000108909 Krtap19-2Q925I0 141 aa2.66□□□□□ -1.98
Scn8a-204ENSMUST00000108909 Krtap31-2Q8CAY5 177 aa2.65□□□□□ -1.99
Scn8a-204ENSMUST00000108909 Ryr2E9Q401 4966 aaKnown RBP2.64□□□□□ -1.99
Scn8a-204ENSMUST00000108909 Lrp2A2ARV4 4660 aa2.64□□□□□ -1.99
Scn8a-204ENSMUST00000108909 Gm38119A0A0A6YX29 146 aa2.62□□□□□ -1.99
Scn8a-204ENSMUST00000108909 Herc2Q4U2R1 4836 aa2.62□□□□□ -1.99
Scn8a-204ENSMUST00000108909 Sprr2iO70560 76 aa2.59□□□□□ -1.99
Scn8a-204ENSMUST00000108909 Mt3P28184 68 aa2.58□□□□□ -2
Scn8a-204ENSMUST00000108909 Krtap1-3A2A588 173 aa2.57□□□□□ -2
Scn8a-204ENSMUST00000108909 Krtap19-4Q925H7 84 aa2.56□□□□□ -2
Scn8a-204ENSMUST00000108909 Kiaa1109A2AAE1 5005 aa2.56□□□□□ -2
Scn8a-204ENSMUST00000108909 Lce1bQ9D149 137 aa2.56□□□□□ -2
Scn8a-204ENSMUST00000108909 Lce1eQ9D139 143 aa2.55□□□□□ -2
Scn8a-204ENSMUST00000108909 Herc1E9PZP8 4859 aa2.54□□□□□ -2
Scn8a-204ENSMUST00000108909 Lce1fB9EJP6 147 aa2.54□□□□□ -2
Scn8a-204ENSMUST00000108909 Lce1cQ9D1C5 147 aa2.54□□□□□ -2
Scn8a-204ENSMUST00000108909 Lce1lQ9D1G7 135 aa2.54□□□□□ -2
Scn8a-204ENSMUST00000108909 Lce1dQ9D731 133 aa2.54□□□□□ -2
Scn8a-204ENSMUST00000108909 Ubr4A2AN08 5180 aa2.52□□□□□ -2.01
Scn8a-204ENSMUST00000108909 Prm1P02319 51 aa2.51□□□□□ -2.01
Scn8a-204ENSMUST00000108909 Sprr2eO70556 76 aa2.5□□□□□ -2.01
Scn8a-204ENSMUST00000108909 Lce1a2Q9D1K4 149 aa2.49□□□□□ -2.01
Scn8a-204ENSMUST00000108909 Mdn1A2ANY6 5589 aaKnown RBP2.49□□□□□ -2.01
Scn8a-204ENSMUST00000108909 Syne1Q6ZWR6 8799 aa2.47□□□□□ -2.01
Scn8a-204ENSMUST00000108909 Sprr2fO70557 76 aa2.44□□□□□ -2.02
Scn8a-204ENSMUST00000108909 Gm11938Q9D3H4 131 aa2.44□□□□□ -2.02
Scn8a-204ENSMUST00000108909 Gm7735D3YX18 52 aa2.43□□□□□ -2.02
Scn8a-204ENSMUST00000108909 Gm9789Q8BIG3 52 aa2.42□□□□□ -2.02
Scn8a-204ENSMUST00000108909 Sprr2dO70555 85 aa2.41□□□□□ -2.02
Scn8a-204ENSMUST00000108909 Krtap17-1A2A5X6 109 aa2.4□□□□□ -2.02
Scn8a-204ENSMUST00000108909 Sprr2hO70559 108 aa2.4□□□□□ -2.02
Scn8a-204ENSMUST00000108909 HydinQ80W93 5154 aa2.39□□□□□ -2.03
Scn8a-204ENSMUST00000108909 Krtap4-16Q91W93 202 aa2.39□□□□□ -2.03
Scn8a-204ENSMUST00000108909 Gm10061D3Z714 54 aa2.36□□□□□ -2.03
Scn8a-204ENSMUST00000108909 Birc6O88738 4882 aa2.36□□□□□ -2.03
Scn8a-204ENSMUST00000108909 Gm11569B1AQB1 180 aa2.34□□□□□ -2.03
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms