RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Dync2h1Q45VK7 4306 aa8.38□□□□□ -1.07
Smarcc1-201ENSMUST00000088716 Lce1mQ9CR91 182 aa8.35□□□□□ -1.07
Smarcc1-201ENSMUST00000088716 Dnah11E9Q7N9 4488 aa8.31□□□□□ -1.08
Smarcc1-201ENSMUST00000088716 Dync1h1Q9JHU4 4644 aaKnown RBP8.3□□□□□ -1.08
Smarcc1-201ENSMUST00000088716 ApobE9Q414 4505 aa8.28□□□□□ -1.08
Smarcc1-201ENSMUST00000088716 SacsQ9JLC8 4582 aa8.25□□□□□ -1.09
Smarcc1-201ENSMUST00000088716 Dnah2P0C6F1 4456 aa8.23□□□□□ -1.09
Smarcc1-201ENSMUST00000088716 Csmd3Q80T79 3707 aa8.23□□□□□ -1.09
Smarcc1-201ENSMUST00000088716 Krtap9-5A2A5X3 358 aa8.22□□□□□ -1.09
Smarcc1-201ENSMUST00000088716 BsnO88737 3942 aa8.21□□□□□ -1.1
Smarcc1-201ENSMUST00000088716 Lce3bQ9CQM7 98 aa8.21□□□□□ -1.1
Smarcc1-201ENSMUST00000088716 Dnah1E9Q8T7 4250 aa8.18□□□□□ -1.1
Smarcc1-201ENSMUST00000088716 CubnQ9JLB4 3623 aa8.18□□□□□ -1.1
Smarcc1-201ENSMUST00000088716 Dnah9B1AR51 4484 aa8.17□□□□□ -1.1
Smarcc1-201ENSMUST00000088716 Krtap16-3Q8C1I6 86 aa8.16□□□□□ -1.1
Smarcc1-201ENSMUST00000088716 Krtap19-3Q925H6 87 aa8.16□□□□□ -1.1
Smarcc1-201ENSMUST00000088716 Fat1A0A1L1SQU7 4645 aa8.15□□□□□ -1.1
Smarcc1-201ENSMUST00000088716 Hspg2Q05793 3707 aaKnown RBP8.14□□□□□ -1.11
Smarcc1-201ENSMUST00000088716 TnxbO35452 4006 aa8.11□□□□□ -1.11
Smarcc1-201ENSMUST00000088716 Dnah3Q8BW94 4083 aa8.11□□□□□ -1.11
Smarcc1-201ENSMUST00000088716 PrkdcP97313 4128 aa8.1□□□□□ -1.11
Smarcc1-201ENSMUST00000088716 Lce3cQ91V05 98 aa8.05□□□□□ -1.12
Smarcc1-201ENSMUST00000088716 Pkd1O08852 4293 aa8.04□□□□□ -1.12
Smarcc1-201ENSMUST00000088716 Xirp2Q4U4S6 3784 aa8.02□□□□□ -1.13
Smarcc1-201ENSMUST00000088716 Dnah7bL7N1Y0 4068 aa8.01□□□□□ -1.13
Smarcc1-201ENSMUST00000088716 Lrp1bQ9JI18 4599 aa8.01□□□□□ -1.13
Smarcc1-201ENSMUST00000088716 Gm10272F7CZ33 110 aa8□□□□□ -1.13
Smarcc1-201ENSMUST00000088716 Ryr1E9PZQ0 5035 aa7.99□□□□□ -1.13
Smarcc1-201ENSMUST00000088716 Mycbp2Q7TPH6 4711 aa7.98□□□□□ -1.13
Smarcc1-201ENSMUST00000088716 Prm1P02319 51 aa7.95□□□□□ -1.14
Smarcc1-201ENSMUST00000088716 Gm10100J3QK64 120 aa7.95□□□□□ -1.14
Smarcc1-201ENSMUST00000088716 Krtap19-1Q925H2 87 aa7.94□□□□□ -1.14
Smarcc1-201ENSMUST00000088716 Dnah8Q91XQ0 4731 aa7.88□□□□□ -1.15
Smarcc1-201ENSMUST00000088716 Krtap22-2J3QNX6 67 aa7.82□□□□□ -1.16
Smarcc1-201ENSMUST00000088716 Lce3eF8VQJ0 98 aa7.81□□□□□ -1.16
Smarcc1-201ENSMUST00000088716 Lce3fQ6PAI4 98 aa7.81□□□□□ -1.16
Smarcc1-201ENSMUST00000088716 Mt2P02798 61 aa7.79□□□□□ -1.16
Smarcc1-201ENSMUST00000088716 Lce3dE9Q8V1 98 aa7.76□□□□□ -1.17
Smarcc1-201ENSMUST00000088716 Gm10142J3KMP7 120 aa7.75□□□□□ -1.17
Smarcc1-201ENSMUST00000088716 2310046K23RikA0A0A6YVW6 87 aa7.75□□□□□ -1.17
Smarcc1-201ENSMUST00000088716 Fras1Q80T14 4010 aa7.74□□□□□ -1.17
Smarcc1-201ENSMUST00000088716 Fat3Q8BNA6 4555 aa7.71□□□□□ -1.18
Smarcc1-201ENSMUST00000088716 Dnhd1D3Z2X2 4750 aa7.69□□□□□ -1.18
Smarcc1-201ENSMUST00000088716 Hectd4E9Q2E4 4418 aa7.69□□□□□ -1.18
Smarcc1-201ENSMUST00000088716 Gm38119A0A0A6YX29 146 aa7.68□□□□□ -1.18
Smarcc1-201ENSMUST00000088716 Sprr2iO70560 76 aa7.67□□□□□ -1.18
Smarcc1-201ENSMUST00000088716 Kmt2aP55200 3966 aa7.65□□□□□ -1.18
Smarcc1-201ENSMUST00000088716 Krtap19-2Q925I0 141 aa7.61□□□□□ -1.19
Smarcc1-201ENSMUST00000088716 Dnah6E9Q0B6 4144 aa7.61□□□□□ -1.19
Smarcc1-201ENSMUST00000088716 Lce3aQ497I5 98 aa7.6□□□□□ -1.19
Smarcc1-201ENSMUST00000088716 Gm7735D3YX18 52 aa7.58□□□□□ -1.2
Smarcc1-201ENSMUST00000088716 Lrp1Q91ZX7 4545 aaKnown RBP7.53□□□□□ -1.2
Smarcc1-201ENSMUST00000088716 Ryr2E9Q401 4966 aaKnown RBP7.52□□□□□ -1.21
Smarcc1-201ENSMUST00000088716 Krtap1-3A2A588 173 aa7.52□□□□□ -1.21
Smarcc1-201ENSMUST00000088716 Lce1jD3YUU5 139 aa7.43□□□□□ -1.22
Smarcc1-201ENSMUST00000088716 Lce1gQ9D195 139 aa7.43□□□□□ -1.22
Smarcc1-201ENSMUST00000088716 Lce1iQ9D6P5 149 aa7.43□□□□□ -1.22
Smarcc1-201ENSMUST00000088716 Lce1hQ9D6R3 140 aa7.43□□□□□ -1.22
Smarcc1-201ENSMUST00000088716 Herc1E9PZP8 4859 aa7.43□□□□□ -1.22
Smarcc1-201ENSMUST00000088716 Gm9789Q8BIG3 52 aa7.41□□□□□ -1.22
Smarcc1-201ENSMUST00000088716 Dnah7aE9Q0T8 4024 aa7.4□□□□□ -1.22
Smarcc1-201ENSMUST00000088716 Dnah7cA0A087WR13 4024 aa7.4□□□□□ -1.23
Smarcc1-201ENSMUST00000088716 Ryr3A2AGL3 4863 aa7.33□□□□□ -1.24
Smarcc1-201ENSMUST00000088716 Lce1fB9EJP6 147 aa7.33□□□□□ -1.24
Smarcc1-201ENSMUST00000088716 Lce1cQ9D1C5 147 aa7.33□□□□□ -1.24
Smarcc1-201ENSMUST00000088716 Lce1lQ9D1G7 135 aa7.33□□□□□ -1.24
Smarcc1-201ENSMUST00000088716 Lce1dQ9D731 133 aa7.33□□□□□ -1.24
Smarcc1-201ENSMUST00000088716 Herc2Q4U2R1 4836 aa7.29□□□□□ -1.24
Smarcc1-201ENSMUST00000088716 Lce1bQ9D149 137 aa7.28□□□□□ -1.24
Smarcc1-201ENSMUST00000088716 Fat2Q5F226 4351 aa7.26□□□□□ -1.25
Smarcc1-201ENSMUST00000088716 Gm10061D3Z714 54 aa7.25□□□□□ -1.25
Smarcc1-201ENSMUST00000088716 Gm10024A0A0A0MQA4 119 aa7.24□□□□□ -1.25
Smarcc1-201ENSMUST00000088716 Lrp2A2ARV4 4660 aa7.18□□□□□ -1.26
Smarcc1-201ENSMUST00000088716 Lce1eQ9D139 143 aa7.18□□□□□ -1.26
Smarcc1-201ENSMUST00000088716 Sprr2eO70556 76 aa7.17□□□□□ -1.26
Smarcc1-201ENSMUST00000088716 Sprr2fO70557 76 aa7.17□□□□□ -1.26
Smarcc1-201ENSMUST00000088716 Gm11569B1AQB1 180 aa7.16□□□□□ -1.26
Smarcc1-201ENSMUST00000088716 Kiaa1109A2AAE1 5005 aa7.16□□□□□ -1.26
Smarcc1-201ENSMUST00000088716 HydinQ80W93 5154 aa7.11□□□□□ -1.27
Smarcc1-201ENSMUST00000088716 Vps13bQ80TY5 3993 aa7.1□□□□□ -1.27
Smarcc1-201ENSMUST00000088716 Krtap19-4Q925H7 84 aa7.07□□□□□ -1.28
Smarcc1-201ENSMUST00000088716 Krtap9-3Q3V2C1 136 aa7.06□□□□□ -1.28
Smarcc1-201ENSMUST00000088716 PcloQ9QYX7 5068 aa7.02□□□□□ -1.29
Smarcc1-201ENSMUST00000088716 Kmt2cQ8BRH4 4903 aa6.97□□□□□ -1.29
Smarcc1-201ENSMUST00000088716 Mt4P47945 62 aa6.91□□□□□ -1.3
Smarcc1-201ENSMUST00000088716 Pkhd1E9PZ36 4059 aa6.86□□□□□ -1.31
Smarcc1-201ENSMUST00000088716 Krtap4-2B1AQ85 167 aa6.8□□□□□ -1.32
Smarcc1-201ENSMUST00000088716 Birc6O88738 4882 aa6.79□□□□□ -1.32
Smarcc1-201ENSMUST00000088716 Krtap4-6Q3V4B7 195 aa6.74□□□□□ -1.33
Smarcc1-201ENSMUST00000088716 Lce1a2Q9D1K4 149 aa6.7□□□□□ -1.34
Smarcc1-201ENSMUST00000088716 Pkhd1l1Q80ZA4 4249 aa6.68□□□□□ -1.34
Smarcc1-201ENSMUST00000088716 Mdn1A2ANY6 5589 aaKnown RBP6.51□□□□□ -1.37
Smarcc1-201ENSMUST00000088716 Krtap4-1Q3UUY3 169 aa6.46□□□□□ -1.37
Smarcc1-201ENSMUST00000088716 4932415D10RikA0A1W2P6U8 4986 aa6.4□□□□□ -1.39
Smarcc1-201ENSMUST00000088716 Sprr2hO70559 108 aa6.39□□□□□ -1.39
Smarcc1-201ENSMUST00000088716 Gm11562A0PK51 136 aa6.37□□□□□ -1.39
Smarcc1-201ENSMUST00000088716 Gm11596B1AQB0 205 aa6.37□□□□□ -1.39
Smarcc1-201ENSMUST00000088716 2300003K06RikA2A4M0 262 aa6.36□□□□□ -1.39
Smarcc1-201ENSMUST00000088716 Krtap31-1Q9D644 177 aa6.35□□□□□ -1.39
Smarcc1-201ENSMUST00000088716 Gm11564A2A4L9 201 aa6.33□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms