RNA–Protein interactions for RNA: ENSMUST00000064187.11

Thra-201, Transcript of Thyroid hormone receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Thra, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thra-201ENSMUST00000064187 Ndufaf8A2AMZ4 74 aa10.75□□□□□ -0.69
Thra-201ENSMUST00000064187 Gm7735D3YX18 52 aa10.75□□□□□ -0.69
Thra-201ENSMUST00000064187 Ush2AQ2QI47 5193 aa10.73□□□□□ -0.69
Thra-201ENSMUST00000064187 Spaca4Q80ZQ0 127 aa10.7□□□□□ -0.7
Thra-201ENSMUST00000064187 Gm9789Q8BIG3 52 aa10.68□□□□□ -0.7
Thra-201ENSMUST00000064187 Gm4491E0CX42 125 aa10.6□□□□□ -0.71
Thra-201ENSMUST00000064187 Cox6b2Q80ZN9 88 aa10.6□□□□□ -0.71
Thra-201ENSMUST00000064187 Gm9955Q8CEJ8 102 aa10.58□□□□□ -0.72
Thra-201ENSMUST00000064187 Gm5965D3Z724 196 aa10.54□□□□□ -0.72
Thra-201ENSMUST00000064187 Hmcn2A2AJ76 5100 aa10.51□□□□□ -0.73
Thra-201ENSMUST00000064187 4932415D10RikA0A1W2P6U8 4986 aa10.51□□□□□ -0.73
Thra-201ENSMUST00000064187 Gm10382Q3V0T5 144 aa10.51□□□□□ -0.73
Thra-201ENSMUST00000064187 Ubr4A2AN08 5180 aa10.48□□□□□ -0.73
Thra-201ENSMUST00000064187 Rpl37Q9D823 97 aa10.44□□□□□ -0.74
Thra-201ENSMUST00000064187 Rps29P62274 56 aa10.42□□□□□ -0.74
Thra-201ENSMUST00000064187 Rnase13Q5GAM7 153 aa10.38□□□□□ -0.75
Thra-201ENSMUST00000064187 Gm5767A0A0J9YTU8 78 aa10.3□□□□□ -0.76
Thra-201ENSMUST00000064187 Gm17606F6ZL36 78 aa10.23□□□□□ -0.77
Thra-201ENSMUST00000064187 Gm11939A2A592 99 aa10.18□□□□□ -0.78
Thra-201ENSMUST00000064187 Gm21887J3QQ04 176 aa10.16□□□□□ -0.78
Thra-201ENSMUST00000064187 Gm9112A2AI92 75 aa10.1□□□□□ -0.79
Thra-201ENSMUST00000064187 Krtap1-3A2A588 173 aa10.08□□□□□ -0.8
Thra-201ENSMUST00000064187 2310057N15RikQ9D6T8 200 aa10.06□□□□□ -0.8
Thra-201ENSMUST00000064187 Krtap15-1Q9QZU5 150 aa10.05□□□□□ -0.8
Thra-201ENSMUST00000064187 Krtap7-1Q9D3I6 87 aa10.04□□□□□ -0.8
Thra-201ENSMUST00000064187 B930094E09RikQ8C4T2 136 aa9.99□□□□□ -0.81
Thra-201ENSMUST00000064187 ZanO88799 5376 aa9.98□□□□□ -0.81
Thra-201ENSMUST00000064187 Sec61bQ9CQS8 96 aaKnown RBP9.94□□□□□ -0.82
Thra-201ENSMUST00000064187 Crct1Q6PAI5 102 aa9.93□□□□□ -0.82
Thra-201ENSMUST00000064187 Gm19426M0QWC7 77 aa9.88□□□□□ -0.83
Thra-201ENSMUST00000064187 Gm40193A0A1B0GT39 78 aa9.83□□□□□ -0.84
Thra-201ENSMUST00000064187 Fat4Q2PZL6 4981 aa9.82□□□□□ -0.84
Thra-201ENSMUST00000064187 Fam229aB2KGE5 128 aa9.79□□□□□ -0.84
Thra-201ENSMUST00000064187 LorP18165 486 aa9.78□□□□□ -0.84
Thra-201ENSMUST00000064187 Gm19668J3QMD1 248 aa9.7□□□□□ -0.86
Thra-201ENSMUST00000064187 Krtap16-3Q8C1I6 86 aa9.67□□□□□ -0.86
Thra-201ENSMUST00000064187 Krtap19-1Q925H2 87 aa9.65□□□□□ -0.86
Thra-201ENSMUST00000064187 Rnf213E9Q555 5152 aaKnown RBP9.64□□□□□ -0.87
Thra-201ENSMUST00000064187 Krtap19-3Q925H6 87 aa9.64□□□□□ -0.87
Thra-201ENSMUST00000064187 Krtap3-1A2A591 98 aa9.63□□□□□ -0.87
Thra-201ENSMUST00000064187 Gm10318A0A1W2P728 225 aa9.6□□□□□ -0.87
Thra-201ENSMUST00000064187 Gm19402J3QJV4 266 aa9.54□□□□□ -0.88
Thra-201ENSMUST00000064187 Gm10061D3Z714 54 aa9.46□□□□□ -0.89
Thra-201ENSMUST00000064187 Krtap1-4Q3V2D6 188 aa9.42□□□□□ -0.9
Thra-201ENSMUST00000064187 Gm17416Q30KP4 66 aa9.33□□□□□ -0.92
Thra-201ENSMUST00000064187 Gm17402F6Z0L5 76 aa9.28□□□□□ -0.92
Thra-201ENSMUST00000064187 Gm11569B1AQB1 180 aa9.25□□□□□ -0.93
Thra-201ENSMUST00000064187 SspoQ8CG65 4998 aa9.24□□□□□ -0.93
Thra-201ENSMUST00000064187 2210017I01RikA0A0A6YVV1 95 aa9.23□□□□□ -0.93
Thra-201ENSMUST00000064187 Gm11562A0PK51 136 aa9.17□□□□□ -0.94
Thra-201ENSMUST00000064187 Krtap17-1A2A5X6 109 aa9.17□□□□□ -0.94
Thra-201ENSMUST00000064187 Krtap13-1Q8K198 168 aa9.15□□□□□ -0.94
Thra-201ENSMUST00000064187 BC029722A0A0N4SW31 51 aa9.14□□□□□ -0.95
Thra-201ENSMUST00000064187 Krtap4-2B1AQ85 167 aa9.03□□□□□ -0.96
Thra-201ENSMUST00000064187 Camk2n1Q6QWF9 78 aa9□□□□□ -0.97
Thra-201ENSMUST00000064187 Krtap1-5A2A590 122 aa8.99□□□□□ -0.97
Thra-201ENSMUST00000064187 Lce1gQ9D195 139 aa8.91□□□□□ -0.98
Thra-201ENSMUST00000064187 Sprr2a3Q4KL71 83 aa8.83□□□□□ -1
Thra-201ENSMUST00000064187 Sprr2a1Q9CQK8 83 aa8.83□□□□□ -1
Thra-201ENSMUST00000064187 Syne2Q6ZWQ0 6874 aaKnown RBP8.7□□□□□ -1.02
Thra-201ENSMUST00000064187 Gm11555B1AQ89 175 aa8.7□□□□□ -1.02
Thra-201ENSMUST00000064187 Krtap9-5A2A5X3 358 aa8.66□□□□□ -1.02
Thra-201ENSMUST00000064187 Krtap19-2Q925I0 141 aa8.66□□□□□ -1.02
Thra-201ENSMUST00000064187 Lce1jD3YUU5 139 aa8.63□□□□□ -1.03
Thra-201ENSMUST00000064187 Gm11596B1AQB0 205 aa8.58□□□□□ -1.04
Thra-201ENSMUST00000064187 Krtap12-1Q9Z287 130 aa8.56□□□□□ -1.04
Thra-201ENSMUST00000064187 Muc5bE9Q5I3 4800 aa8.54□□□□□ -1.04
Thra-201ENSMUST00000064187 Tnp1P10856 55 aa8.51□□□□□ -1.05
Thra-201ENSMUST00000064187 Krtap4-6Q3V4B7 195 aa8.51□□□□□ -1.05
Thra-201ENSMUST00000064187 Spink7Q6IE32 76 aa8.49□□□□□ -1.05
Thra-201ENSMUST00000064187 Mdn1A2ANY6 5589 aaKnown RBP8.41□□□□□ -1.06
Thra-201ENSMUST00000064187 Krtap4-1Q3UUY3 169 aa8.35□□□□□ -1.07
Thra-201ENSMUST00000064187 Krtap19-9aF8WH65 55 aa8.33□□□□□ -1.08
Thra-201ENSMUST00000064187 Gm6358A0A087WPH4 74 aa8.29□□□□□ -1.08
Thra-201ENSMUST00000064187 Gm11564A2A4L9 201 aa8.16□□□□□ -1.1
Thra-201ENSMUST00000064187 Gm11563B1AQ90 168 aa8.16□□□□□ -1.1
Thra-201ENSMUST00000064187 Gm11595B1AQA7 289 aa8.16□□□□□ -1.1
Thra-201ENSMUST00000064187 Krtap4-8B1AQA8 209 aa8.16□□□□□ -1.1
Thra-201ENSMUST00000064187 2310046K23RikA0A0A6YVW6 87 aa8.11□□□□□ -1.11
Thra-201ENSMUST00000064187 Lce1iQ9D6P5 149 aa8.09□□□□□ -1.11
Thra-201ENSMUST00000064187 Lce1a2Q9D1K4 149 aa7.95□□□□□ -1.14
Thra-201ENSMUST00000064187 Krtap4-9B1AQA9 244 aa7.91□□□□□ -1.14
Thra-201ENSMUST00000064187 Mt2P02798 61 aa7.86□□□□□ -1.15
Thra-201ENSMUST00000064187 Mt4P47945 62 aa7.79□□□□□ -1.16
Thra-201ENSMUST00000064187 Fsip2A2ARZ3 6995 aa7.75□□□□□ -1.17
Thra-201ENSMUST00000064187 Krtap9-3Q3V2C1 136 aa7.69□□□□□ -1.18
Thra-201ENSMUST00000064187 Krtap8-1O08633 61 aa7.68□□□□□ -1.18
Thra-201ENSMUST00000064187 Krtap4-13Q9D7P3 165 aa7.62□□□□□ -1.19
Thra-201ENSMUST00000064187 Lce1bQ9D149 137 aa7.54□□□□□ -1.2
Thra-201ENSMUST00000064187 Krtap6-3A0A087WQL6 57 aa7.51□□□□□ -1.21
Thra-201ENSMUST00000064187 Krtap22-2J3QNX6 67 aa7.47□□□□□ -1.21
Thra-201ENSMUST00000064187 Sprr2kO70562 68 aa7.4□□□□□ -1.22
Thra-201ENSMUST00000064187 Lce1dQ9D731 133 aa7.37□□□□□ -1.23
Thra-201ENSMUST00000064187 Gm38119A0A0A6YX29 146 aa7.37□□□□□ -1.23
Thra-201ENSMUST00000064187 2300003K06RikA2A4M0 262 aa7.35□□□□□ -1.23
Thra-201ENSMUST00000064187 Krtap19-9bQ99NG9 58 aa7.35□□□□□ -1.23
Thra-201ENSMUST00000064187 4933428G20RikQ9D3X4 101 aa7.33□□□□□ -1.24
Thra-201ENSMUST00000064187 Lce1lQ9D1G7 135 aa7.28□□□□□ -1.24
Thra-201ENSMUST00000064187 Krtap4-7Q9D732 168 aa7.23□□□□□ -1.25
Thra-201ENSMUST00000064187 Lce1hQ9D6R3 140 aa7.21□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms