RNA–Protein interactions for RNA: ENSMUST00000055425.14

Phtf1-201, Transcript of Putative homeodomain transcription factor 1, mousemouse

TSL 1 (best) BASIC

Gene Phtf1, Length 3,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1-201ENSMUST00000055425 Ryr2E9Q401 4966 aaKnown RBP8.35□□□□□ -1.07
Phtf1-201ENSMUST00000055425 Abca13Q5SSE9 5034 aa8.33□□□□□ -1.08
Phtf1-201ENSMUST00000055425 Dnah8Q91XQ0 4731 aa8.29□□□□□ -1.08
Phtf1-201ENSMUST00000055425 2210017I01RikA0A0A6YVV1 95 aa8.26□□□□□ -1.09
Phtf1-201ENSMUST00000055425 Gm19426M0QWC7 77 aa8.2□□□□□ -1.1
Phtf1-201ENSMUST00000055425 Ndufaf8A2AMZ4 74 aa8.19□□□□□ -1.1
Phtf1-201ENSMUST00000055425 Prm2P07978 107 aa8.15□□□□□ -1.1
Phtf1-201ENSMUST00000055425 B930094E09RikQ8C4T2 136 aa8.15□□□□□ -1.11
Phtf1-201ENSMUST00000055425 Ryr1E9PZQ0 5035 aa8.15□□□□□ -1.11
Phtf1-201ENSMUST00000055425 2310057N15RikQ9D6T8 200 aa8.05□□□□□ -1.12
Phtf1-201ENSMUST00000055425 BC029722A0A0N4SW31 51 aa8.04□□□□□ -1.12
Phtf1-201ENSMUST00000055425 Krtap13-1Q8K198 168 aa8.02□□□□□ -1.13
Phtf1-201ENSMUST00000055425 Krtap7-1Q9D3I6 87 aa7.96□□□□□ -1.14
Phtf1-201ENSMUST00000055425 Gm19402J3QJV4 266 aa7.91□□□□□ -1.14
Phtf1-201ENSMUST00000055425 Gm17402F6Z0L5 76 aa7.87□□□□□ -1.15
Phtf1-201ENSMUST00000055425 Kiaa1109A2AAE1 5005 aa7.87□□□□□ -1.15
Phtf1-201ENSMUST00000055425 Gm19668J3QMD1 248 aa7.85□□□□□ -1.15
Phtf1-201ENSMUST00000055425 HydinQ80W93 5154 aa7.85□□□□□ -1.15
Phtf1-201ENSMUST00000055425 Lrp2A2ARV4 4660 aa7.85□□□□□ -1.15
Phtf1-201ENSMUST00000055425 Dnhd1D3Z2X2 4750 aa7.84□□□□□ -1.15
Phtf1-201ENSMUST00000055425 Krtap1-5A2A590 122 aa7.81□□□□□ -1.16
Phtf1-201ENSMUST00000055425 Herc2Q4U2R1 4836 aa7.81□□□□□ -1.16
Phtf1-201ENSMUST00000055425 Sec61bQ9CQS8 96 aaKnown RBP7.73□□□□□ -1.17
Phtf1-201ENSMUST00000055425 Fam229aB2KGE5 128 aa7.73□□□□□ -1.17
Phtf1-201ENSMUST00000055425 Gm10318A0A1W2P728 225 aa7.72□□□□□ -1.17
Phtf1-201ENSMUST00000055425 Spink7Q6IE32 76 aa7.68□□□□□ -1.18
Phtf1-201ENSMUST00000055425 Birc6O88738 4882 aa7.67□□□□□ -1.18
Phtf1-201ENSMUST00000055425 Sprr2a3Q4KL71 83 aa7.67□□□□□ -1.18
Phtf1-201ENSMUST00000055425 Sprr2a1Q9CQK8 83 aa7.67□□□□□ -1.18
Phtf1-201ENSMUST00000055425 Gm40193A0A1B0GT39 78 aa7.64□□□□□ -1.19
Phtf1-201ENSMUST00000055425 Crct1Q6PAI5 102 aa7.6□□□□□ -1.19
Phtf1-201ENSMUST00000055425 Krtap16-3Q8C1I6 86 aa7.55□□□□□ -1.2
Phtf1-201ENSMUST00000055425 Gm9112A2AI92 75 aa7.51□□□□□ -1.21
Phtf1-201ENSMUST00000055425 PcloQ9QYX7 5068 aa7.49□□□□□ -1.21
Phtf1-201ENSMUST00000055425 Krtap19-1Q925H2 87 aa7.42□□□□□ -1.22
Phtf1-201ENSMUST00000055425 Camk2n1Q6QWF9 78 aa7.4□□□□□ -1.22
Phtf1-201ENSMUST00000055425 Krtap19-3Q925H6 87 aa7.36□□□□□ -1.23
Phtf1-201ENSMUST00000055425 Krtap1-4Q3V2D6 188 aa7.3□□□□□ -1.24
Phtf1-201ENSMUST00000055425 Ubr4A2AN08 5180 aa7.23□□□□□ -1.25
Phtf1-201ENSMUST00000055425 ZanO88799 5376 aa7.13□□□□□ -1.27
Phtf1-201ENSMUST00000055425 Fat4Q2PZL6 4981 aa7.13□□□□□ -1.27
Phtf1-201ENSMUST00000055425 Herc1E9PZP8 4859 aa7.11□□□□□ -1.27
Phtf1-201ENSMUST00000055425 4932415D10RikA0A1W2P6U8 4986 aa7.08□□□□□ -1.28
Phtf1-201ENSMUST00000055425 Lce1jD3YUU5 139 aa7.04□□□□□ -1.28
Phtf1-201ENSMUST00000055425 Tnp1P10856 55 aa6.98□□□□□ -1.29
Phtf1-201ENSMUST00000055425 Krtap12-1Q9Z287 130 aa6.93□□□□□ -1.3
Phtf1-201ENSMUST00000055425 Krtap1-3A2A588 173 aa6.92□□□□□ -1.3
Phtf1-201ENSMUST00000055425 Krtap19-9aF8WH65 55 aa6.92□□□□□ -1.3
Phtf1-201ENSMUST00000055425 Hmcn2A2AJ76 5100 aa6.87□□□□□ -1.31
Phtf1-201ENSMUST00000055425 Ush2AQ2QI47 5193 aa6.87□□□□□ -1.31
Phtf1-201ENSMUST00000055425 LorP18165 486 aa6.78□□□□□ -1.32
Phtf1-201ENSMUST00000055425 Lce1mQ9CR91 182 aa6.75□□□□□ -1.33
Phtf1-201ENSMUST00000055425 Krtap17-1A2A5X6 109 aa6.74□□□□□ -1.33
Phtf1-201ENSMUST00000055425 Rnf213E9Q555 5152 aaKnown RBP6.72□□□□□ -1.33
Phtf1-201ENSMUST00000055425 Krtap8-1O08633 61 aa6.71□□□□□ -1.34
Phtf1-201ENSMUST00000055425 2310046K23RikA0A0A6YVW6 87 aa6.62□□□□□ -1.35
Phtf1-201ENSMUST00000055425 Lce1iQ9D6P5 149 aa6.6□□□□□ -1.35
Phtf1-201ENSMUST00000055425 Krtap19-9bQ99NG9 58 aa6.58□□□□□ -1.36
Phtf1-201ENSMUST00000055425 Lce1a2Q9D1K4 149 aa6.56□□□□□ -1.36
Phtf1-201ENSMUST00000055425 Gm9789Q8BIG3 52 aa6.54□□□□□ -1.36
Phtf1-201ENSMUST00000055425 Krtap9-3Q3V2C1 136 aa6.53□□□□□ -1.36
Phtf1-201ENSMUST00000055425 Krtap19-2Q925I0 141 aa6.48□□□□□ -1.37
Phtf1-201ENSMUST00000055425 Krtap9-5A2A5X3 358 aa6.43□□□□□ -1.38
Phtf1-201ENSMUST00000055425 Gm18596A0A1W2P860 280 aa6.42□□□□□ -1.38
Phtf1-201ENSMUST00000055425 Lce1hQ9D6R3 140 aa6.41□□□□□ -1.38
Phtf1-201ENSMUST00000055425 SspoQ8CG65 4998 aa6.37□□□□□ -1.39
Phtf1-201ENSMUST00000055425 Prm1P02319 51 aa6.34□□□□□ -1.39
Phtf1-201ENSMUST00000055425 Gm7735D3YX18 52 aa6.31□□□□□ -1.4
Phtf1-201ENSMUST00000055425 Lce1dQ9D731 133 aa6.17□□□□□ -1.42
Phtf1-201ENSMUST00000055425 Mt2P02798 61 aa6.1□□□□□ -1.43
Phtf1-201ENSMUST00000055425 Gm6358A0A087WPH4 74 aa6.05□□□□□ -1.44
Phtf1-201ENSMUST00000055425 Muc5bE9Q5I3 4800 aa6□□□□□ -1.45
Phtf1-201ENSMUST00000055425 Gm10061D3Z714 54 aa5.95□□□□□ -1.46
Phtf1-201ENSMUST00000055425 Lce1eQ9D139 143 aa5.94□□□□□ -1.46
Phtf1-201ENSMUST00000055425 Sprr2gO70558 76 aa5.92□□□□□ -1.46
Phtf1-201ENSMUST00000055425 Gm11938Q9D3H4 131 aa5.84□□□□□ -1.47
Phtf1-201ENSMUST00000055425 4933428G20RikQ9D3X4 101 aa5.84□□□□□ -1.47
Phtf1-201ENSMUST00000055425 Krtap4-1Q3UUY3 169 aa5.8□□□□□ -1.48
Phtf1-201ENSMUST00000055425 Sprr2dO70555 85 aa5.79□□□□□ -1.48
Phtf1-201ENSMUST00000055425 Gm10272F7CZ33 110 aa5.78□□□□□ -1.48
Phtf1-201ENSMUST00000055425 Krtap22-2J3QNX6 67 aa5.7□□□□□ -1.5
Phtf1-201ENSMUST00000055425 Lce1cQ9D1C5 147 aa5.65□□□□□ -1.51
Phtf1-201ENSMUST00000055425 Mdn1A2ANY6 5589 aaKnown RBP5.6□□□□□ -1.51
Phtf1-201ENSMUST00000055425 Gm11562A0PK51 136 aa5.54□□□□□ -1.52
Phtf1-201ENSMUST00000055425 Gm11569B1AQB1 180 aa5.47□□□□□ -1.53
Phtf1-201ENSMUST00000055425 Gm10100J3QK64 120 aa5.46□□□□□ -1.54
Phtf1-201ENSMUST00000055425 Krtap31-1Q9D644 177 aa5.44□□□□□ -1.54
Phtf1-201ENSMUST00000055425 Lce1fB9EJP6 147 aa5.44□□□□□ -1.54
Phtf1-201ENSMUST00000055425 Lce1a1Q9CQH5 143 aa5.44□□□□□ -1.54
Phtf1-201ENSMUST00000055425 Lce3bQ9CQM7 98 aa5.4□□□□□ -1.55
Phtf1-201ENSMUST00000055425 Gm11563B1AQ90 168 aa5.39□□□□□ -1.55
Phtf1-201ENSMUST00000055425 Krtap4-7Q9D732 168 aa5.39□□□□□ -1.55
Phtf1-201ENSMUST00000055425 Krtap19-4Q925H7 84 aa5.37□□□□□ -1.55
Phtf1-201ENSMUST00000055425 Gm10142J3KMP7 120 aa5.33□□□□□ -1.56
Phtf1-201ENSMUST00000055425 Gm11555B1AQ89 175 aa5.32□□□□□ -1.56
Phtf1-201ENSMUST00000055425 Syne1Q6ZWR6 8799 aa5.3□□□□□ -1.56
Phtf1-201ENSMUST00000055425 Lce3cQ91V05 98 aa5.2□□□□□ -1.58
Phtf1-201ENSMUST00000055425 Lce3dE9Q8V1 98 aa5.17□□□□□ -1.58
Phtf1-201ENSMUST00000055425 Sprr2iO70560 76 aa5.16□□□□□ -1.58
Phtf1-201ENSMUST00000055425 Sprr2hO70559 108 aa5.1□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 84.1 ms