RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 2210017I01RikA0A0A6YVV1 95 aa7.28□□□□□ -1.24
Ushbp1-201ENSMUST00000049184 Prm2P07978 107 aa7.28□□□□□ -1.24
Ushbp1-201ENSMUST00000049184 Krtap19-5O08632 62 aa7.25□□□□□ -1.25
Ushbp1-201ENSMUST00000049184 Krtap7-1Q9D3I6 87 aa7.23□□□□□ -1.25
Ushbp1-201ENSMUST00000049184 Mycbp2Q7TPH6 4711 aa7.21□□□□□ -1.26
Ushbp1-201ENSMUST00000049184 Ryr2E9Q401 4966 aaKnown RBP7.2□□□□□ -1.26
Ushbp1-201ENSMUST00000049184 BC029722A0A0N4SW31 51 aa7.15□□□□□ -1.27
Ushbp1-201ENSMUST00000049184 Kmt2cQ8BRH4 4903 aa7.09□□□□□ -1.27
Ushbp1-201ENSMUST00000049184 Gm40193A0A1B0GT39 78 aa7.06□□□□□ -1.28
Ushbp1-201ENSMUST00000049184 Fam229aB2KGE5 128 aa7.06□□□□□ -1.28
Ushbp1-201ENSMUST00000049184 Gm17402F6Z0L5 76 aa7.04□□□□□ -1.28
Ushbp1-201ENSMUST00000049184 Krtap13-1Q8K198 168 aa7.01□□□□□ -1.29
Ushbp1-201ENSMUST00000049184 Ryr1E9PZQ0 5035 aa7.01□□□□□ -1.29
Ushbp1-201ENSMUST00000049184 Dnah8Q91XQ0 4731 aa7□□□□□ -1.29
Ushbp1-201ENSMUST00000049184 Gm19402J3QJV4 266 aa6.98□□□□□ -1.29
Ushbp1-201ENSMUST00000049184 Gm19668J3QMD1 248 aa6.97□□□□□ -1.29
Ushbp1-201ENSMUST00000049184 2310057N15RikQ9D6T8 200 aa6.96□□□□□ -1.3
Ushbp1-201ENSMUST00000049184 Abca13Q5SSE9 5034 aa6.92□□□□□ -1.3
Ushbp1-201ENSMUST00000049184 Sprr2a3Q4KL71 83 aa6.81□□□□□ -1.32
Ushbp1-201ENSMUST00000049184 Sprr2a1Q9CQK8 83 aa6.81□□□□□ -1.32
Ushbp1-201ENSMUST00000049184 Krtap1-5A2A590 122 aa6.81□□□□□ -1.32
Ushbp1-201ENSMUST00000049184 Gm9112A2AI92 75 aa6.75□□□□□ -1.33
Ushbp1-201ENSMUST00000049184 Spink7Q6IE32 76 aa6.74□□□□□ -1.33
Ushbp1-201ENSMUST00000049184 Herc2Q4U2R1 4836 aa6.71□□□□□ -1.34
Ushbp1-201ENSMUST00000049184 Kiaa1109A2AAE1 5005 aa6.69□□□□□ -1.34
Ushbp1-201ENSMUST00000049184 Sec61bQ9CQS8 96 aaKnown RBP6.66□□□□□ -1.34
Ushbp1-201ENSMUST00000049184 Birc6O88738 4882 aa6.65□□□□□ -1.34
Ushbp1-201ENSMUST00000049184 Dnhd1D3Z2X2 4750 aa6.64□□□□□ -1.35
Ushbp1-201ENSMUST00000049184 Camk2n1Q6QWF9 78 aa6.6□□□□□ -1.35
Ushbp1-201ENSMUST00000049184 HydinQ80W93 5154 aa6.59□□□□□ -1.35
Ushbp1-201ENSMUST00000049184 Lrp2A2ARV4 4660 aa6.58□□□□□ -1.36
Ushbp1-201ENSMUST00000049184 Gm10318A0A1W2P728 225 aa6.51□□□□□ -1.37
Ushbp1-201ENSMUST00000049184 PcloQ9QYX7 5068 aa6.51□□□□□ -1.37
Ushbp1-201ENSMUST00000049184 Krtap16-3Q8C1I6 86 aa6.47□□□□□ -1.37
Ushbp1-201ENSMUST00000049184 Crct1Q6PAI5 102 aa6.42□□□□□ -1.38
Ushbp1-201ENSMUST00000049184 Krtap1-4Q3V2D6 188 aa6.35□□□□□ -1.39
Ushbp1-201ENSMUST00000049184 Krtap19-1Q925H2 87 aa6.34□□□□□ -1.4
Ushbp1-201ENSMUST00000049184 Tnp1P10856 55 aa6.32□□□□□ -1.4
Ushbp1-201ENSMUST00000049184 Lce1mQ9CR91 182 aa6.29□□□□□ -1.4
Ushbp1-201ENSMUST00000049184 Krtap19-3Q925H6 87 aa6.28□□□□□ -1.4
Ushbp1-201ENSMUST00000049184 Herc1E9PZP8 4859 aa6.24□□□□□ -1.41
Ushbp1-201ENSMUST00000049184 Lce1jD3YUU5 139 aa6.07□□□□□ -1.44
Ushbp1-201ENSMUST00000049184 Gm18596A0A1W2P860 280 aa6□□□□□ -1.45
Ushbp1-201ENSMUST00000049184 Krtap19-9aF8WH65 55 aa6□□□□□ -1.45
Ushbp1-201ENSMUST00000049184 2310046K23RikA0A0A6YVW6 87 aa5.98□□□□□ -1.45
Ushbp1-201ENSMUST00000049184 Krtap12-1Q9Z287 130 aa5.98□□□□□ -1.45
Ushbp1-201ENSMUST00000049184 Hmcn2A2AJ76 5100 aa5.95□□□□□ -1.46
Ushbp1-201ENSMUST00000049184 Ush2AQ2QI47 5193 aa5.94□□□□□ -1.46
Ushbp1-201ENSMUST00000049184 ZanO88799 5376 aa5.93□□□□□ -1.46
Ushbp1-201ENSMUST00000049184 Ubr4A2AN08 5180 aa5.92□□□□□ -1.46
Ushbp1-201ENSMUST00000049184 Krtap8-1O08633 61 aa5.92□□□□□ -1.46
Ushbp1-201ENSMUST00000049184 4932415D10RikA0A1W2P6U8 4986 aa5.91□□□□□ -1.46
Ushbp1-201ENSMUST00000049184 Gm9789Q8BIG3 52 aa5.89□□□□□ -1.47
Ushbp1-201ENSMUST00000049184 Prm1P02319 51 aa5.86□□□□□ -1.47
Ushbp1-201ENSMUST00000049184 Fat4Q2PZL6 4981 aa5.85□□□□□ -1.47
Ushbp1-201ENSMUST00000049184 Krtap1-3A2A588 173 aa5.84□□□□□ -1.48
Ushbp1-201ENSMUST00000049184 Gm7735D3YX18 52 aa5.83□□□□□ -1.48
Ushbp1-201ENSMUST00000049184 Krtap19-9bQ99NG9 58 aa5.8□□□□□ -1.48
Ushbp1-201ENSMUST00000049184 Krtap17-1A2A5X6 109 aa5.71□□□□□ -1.5
Ushbp1-201ENSMUST00000049184 LorP18165 486 aa5.7□□□□□ -1.5
Ushbp1-201ENSMUST00000049184 Krtap9-3Q3V2C1 136 aa5.69□□□□□ -1.5
Ushbp1-201ENSMUST00000049184 Lce1iQ9D6P5 149 aa5.69□□□□□ -1.5
Ushbp1-201ENSMUST00000049184 Lce1a2Q9D1K4 149 aa5.66□□□□□ -1.5
Ushbp1-201ENSMUST00000049184 Lce1hQ9D6R3 140 aa5.63□□□□□ -1.51
Ushbp1-201ENSMUST00000049184 Rnf213E9Q555 5152 aaKnown RBP5.59□□□□□ -1.51
Ushbp1-201ENSMUST00000049184 Krtap19-2Q925I0 141 aa5.52□□□□□ -1.53
Ushbp1-201ENSMUST00000049184 Lce1dQ9D731 133 aa5.48□□□□□ -1.53
Ushbp1-201ENSMUST00000049184 Krtap9-5A2A5X3 358 aa5.48□□□□□ -1.53
Ushbp1-201ENSMUST00000049184 4933428G20RikQ9D3X4 101 aa5.35□□□□□ -1.55
Ushbp1-201ENSMUST00000049184 SspoQ8CG65 4998 aa5.35□□□□□ -1.55
Ushbp1-201ENSMUST00000049184 Sprr2gO70558 76 aa5.34□□□□□ -1.55
Ushbp1-201ENSMUST00000049184 Gm10061D3Z714 54 aa5.28□□□□□ -1.56
Ushbp1-201ENSMUST00000049184 Lce1eQ9D139 143 aa5.28□□□□□ -1.56
Ushbp1-201ENSMUST00000049184 Gm11938Q9D3H4 131 aa5.26□□□□□ -1.57
Ushbp1-201ENSMUST00000049184 Mt2P02798 61 aa5.22□□□□□ -1.57
Ushbp1-201ENSMUST00000049184 Sprr2dO70555 85 aa5.19□□□□□ -1.58
Ushbp1-201ENSMUST00000049184 Gm6358A0A087WPH4 74 aa5.13□□□□□ -1.59
Ushbp1-201ENSMUST00000049184 Muc5bE9Q5I3 4800 aa5.07□□□□□ -1.6
Ushbp1-201ENSMUST00000049184 Gm10272F7CZ33 110 aa5.04□□□□□ -1.6
Ushbp1-201ENSMUST00000049184 Gm11569B1AQB1 180 aa5.01□□□□□ -1.61
Ushbp1-201ENSMUST00000049184 Lce1cQ9D1C5 147 aa4.96□□□□□ -1.61
Ushbp1-201ENSMUST00000049184 Gm11562A0PK51 136 aa4.88□□□□□ -1.63
Ushbp1-201ENSMUST00000049184 Krtap22-2J3QNX6 67 aa4.87□□□□□ -1.63
Ushbp1-201ENSMUST00000049184 Gm10100J3QK64 120 aa4.85□□□□□ -1.63
Ushbp1-201ENSMUST00000049184 Lce1fB9EJP6 147 aa4.79□□□□□ -1.64
Ushbp1-201ENSMUST00000049184 Krtap19-4Q925H7 84 aa4.79□□□□□ -1.64
Ushbp1-201ENSMUST00000049184 Lce1a1Q9CQH5 143 aa4.79□□□□□ -1.64
Ushbp1-201ENSMUST00000049184 Sprr2iO70560 76 aa4.78□□□□□ -1.64
Ushbp1-201ENSMUST00000049184 Lce3bQ9CQM7 98 aa4.78□□□□□ -1.64
Ushbp1-201ENSMUST00000049184 Gm10142J3KMP7 120 aa4.77□□□□□ -1.65
Ushbp1-201ENSMUST00000049184 Mdn1A2ANY6 5589 aaKnown RBP4.74□□□□□ -1.65
Ushbp1-201ENSMUST00000049184 Lce3cQ91V05 98 aa4.62□□□□□ -1.67
Ushbp1-201ENSMUST00000049184 Lce3dE9Q8V1 98 aa4.6□□□□□ -1.67
Ushbp1-201ENSMUST00000049184 Sprr2hO70559 108 aa4.58□□□□□ -1.68
Ushbp1-201ENSMUST00000049184 Krtap4-6Q3V4B7 195 aa4.58□□□□□ -1.68
Ushbp1-201ENSMUST00000049184 Lce1gQ9D195 139 aa4.58□□□□□ -1.68
Ushbp1-201ENSMUST00000049184 Gm11555B1AQ89 175 aa4.57□□□□□ -1.68
Ushbp1-201ENSMUST00000049184 Krtap4-2B1AQ85 167 aa4.56□□□□□ -1.68
Ushbp1-201ENSMUST00000049184 Sprr2eO70556 76 aa4.55□□□□□ -1.68
Ushbp1-201ENSMUST00000049184 Sprr2fO70557 76 aa4.54□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms