RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 2210017I01RikA0A0A6YVV1 95 aa7.44□□□□□ -1.22
Nup54-201ENSMUST00000038514 Dnah8Q91XQ0 4731 aa7.39□□□□□ -1.23
Nup54-201ENSMUST00000038514 Gm21887J3QQ04 176 aa7.38□□□□□ -1.23
Nup54-201ENSMUST00000038514 Abca13Q5SSE9 5034 aa7.35□□□□□ -1.23
Nup54-201ENSMUST00000038514 Ryr1E9PZQ0 5035 aa7.32□□□□□ -1.24
Nup54-201ENSMUST00000038514 B930094E09RikQ8C4T2 136 aa7.31□□□□□ -1.24
Nup54-201ENSMUST00000038514 Gm19426M0QWC7 77 aa7.3□□□□□ -1.24
Nup54-201ENSMUST00000038514 Krtap13-1Q8K198 168 aa7.22□□□□□ -1.25
Nup54-201ENSMUST00000038514 BC029722A0A0N4SW31 51 aa7.2□□□□□ -1.26
Nup54-201ENSMUST00000038514 A0A1Y7VJH8 109 aa7.2□□□□□ -1.26
Nup54-201ENSMUST00000038514 2310057N15RikQ9D6T8 200 aa7.15□□□□□ -1.27
Nup54-201ENSMUST00000038514 Gm17402F6Z0L5 76 aa7.1□□□□□ -1.27
Nup54-201ENSMUST00000038514 Krtap7-1Q9D3I6 87 aa7.09□□□□□ -1.28
Nup54-201ENSMUST00000038514 Dnhd1D3Z2X2 4750 aa7.08□□□□□ -1.28
Nup54-201ENSMUST00000038514 Krtap1-5A2A590 122 aa7.05□□□□□ -1.28
Nup54-201ENSMUST00000038514 Gm19402J3QJV4 266 aa7.04□□□□□ -1.28
Nup54-201ENSMUST00000038514 Kiaa1109A2AAE1 5005 aa6.98□□□□□ -1.29
Nup54-201ENSMUST00000038514 Sec61bQ9CQS8 96 aaKnown RBP6.94□□□□□ -1.3
Nup54-201ENSMUST00000038514 Birc6O88738 4882 aa6.92□□□□□ -1.3
Nup54-201ENSMUST00000038514 Ndufaf8A2AMZ4 74 aa6.92□□□□□ -1.3
Nup54-201ENSMUST00000038514 Sprr2a3Q4KL71 83 aa6.91□□□□□ -1.3
Nup54-201ENSMUST00000038514 Sprr2a1Q9CQK8 83 aa6.91□□□□□ -1.3
Nup54-201ENSMUST00000038514 Herc2Q4U2R1 4836 aa6.91□□□□□ -1.3
Nup54-201ENSMUST00000038514 Gm40193A0A1B0GT39 78 aa6.9□□□□□ -1.31
Nup54-201ENSMUST00000038514 Krtap28-10A0A1Y7VP58 119 aa6.89□□□□□ -1.31
Nup54-201ENSMUST00000038514 Lrp2A2ARV4 4660 aa6.87□□□□□ -1.31
Nup54-201ENSMUST00000038514 Fam229aB2KGE5 128 aa6.85□□□□□ -1.31
Nup54-201ENSMUST00000038514 HydinQ80W93 5154 aa6.85□□□□□ -1.31
Nup54-201ENSMUST00000038514 Gm19668J3QMD1 248 aa6.8□□□□□ -1.32
Nup54-201ENSMUST00000038514 Krtap16-3Q8C1I6 86 aa6.8□□□□□ -1.32
Nup54-201ENSMUST00000038514 PcloQ9QYX7 5068 aa6.79□□□□□ -1.32
Nup54-201ENSMUST00000038514 Spink7Q6IE32 76 aa6.78□□□□□ -1.32
Nup54-201ENSMUST00000038514 Gm10318A0A1W2P728 225 aa6.74□□□□□ -1.33
Nup54-201ENSMUST00000038514 Crct1Q6PAI5 102 aa6.71□□□□□ -1.34
Nup54-201ENSMUST00000038514 Krtap19-1Q925H2 87 aa6.7□□□□□ -1.34
Nup54-201ENSMUST00000038514 Prm2P07978 107 aa6.65□□□□□ -1.34
Nup54-201ENSMUST00000038514 Krtap19-3Q925H6 87 aa6.63□□□□□ -1.35
Nup54-201ENSMUST00000038514 Krtap1-4Q3V2D6 188 aa6.58□□□□□ -1.36
Nup54-201ENSMUST00000038514 Camk2n1Q6QWF9 78 aa6.58□□□□□ -1.36
Nup54-201ENSMUST00000038514 Krtap4-1Q3UUY3 169 aa6.57□□□□□ -1.36
Nup54-201ENSMUST00000038514 A0A1Y7VLE6 161 aa6.54□□□□□ -1.36
Nup54-201ENSMUST00000038514 A030005L19RikA0A1Y7VIU2 113 aa6.52□□□□□ -1.37
Nup54-201ENSMUST00000038514 Lce1mQ9CR91 182 aa6.52□□□□□ -1.37
Nup54-201ENSMUST00000038514 Gm7544A0A1Y7VJ58 118 aa6.51□□□□□ -1.37
Nup54-201ENSMUST00000038514 Herc1E9PZP8 4859 aa6.48□□□□□ -1.37
Nup54-201ENSMUST00000038514 Krtap28-13A0A087WQP5 138 aa6.4□□□□□ -1.38
Nup54-201ENSMUST00000038514 A030005K14RikA0A1Y7VNY1 122 aa6.35□□□□□ -1.39
Nup54-201ENSMUST00000038514 Gm18596A0A1W2P860 280 aa6.35□□□□□ -1.39
Nup54-201ENSMUST00000038514 Lce1jD3YUU5 139 aa6.31□□□□□ -1.4
Nup54-201ENSMUST00000038514 Gm9112A2AI92 75 aa6.26□□□□□ -1.41
Nup54-201ENSMUST00000038514 ZanO88799 5376 aa6.26□□□□□ -1.41
Nup54-201ENSMUST00000038514 Tnp1P10856 55 aa6.25□□□□□ -1.41
Nup54-201ENSMUST00000038514 4932415D10RikA0A1W2P6U8 4986 aa6.25□□□□□ -1.41
Nup54-201ENSMUST00000038514 Krtap12-1Q9Z287 130 aa6.23□□□□□ -1.41
Nup54-201ENSMUST00000038514 Krtap19-9aF8WH65 55 aa6.22□□□□□ -1.41
Nup54-201ENSMUST00000038514 Krtap1-3A2A588 173 aa6.21□□□□□ -1.42
Nup54-201ENSMUST00000038514 Ush2AQ2QI47 5193 aa6.19□□□□□ -1.42
Nup54-201ENSMUST00000038514 Ubr4A2AN08 5180 aa6.16□□□□□ -1.42
Nup54-201ENSMUST00000038514 Hmcn2A2AJ76 5100 aa6.16□□□□□ -1.42
Nup54-201ENSMUST00000038514 Gm11555B1AQ89 175 aa6.11□□□□□ -1.43
Nup54-201ENSMUST00000038514 Gm11563B1AQ90 168 aa6.09□□□□□ -1.43
Nup54-201ENSMUST00000038514 Krtap4-7Q9D732 168 aa6.09□□□□□ -1.43
Nup54-201ENSMUST00000038514 Fat4Q2PZL6 4981 aa6.08□□□□□ -1.44
Nup54-201ENSMUST00000038514 LorP18165 486 aa6.07□□□□□ -1.44
Nup54-201ENSMUST00000038514 Krtap8-1O08633 61 aa6.04□□□□□ -1.44
Nup54-201ENSMUST00000038514 Gm9789Q8BIG3 52 aa6.03□□□□□ -1.44
Nup54-201ENSMUST00000038514 Prm1P02319 51 aa6.02□□□□□ -1.45
Nup54-201ENSMUST00000038514 Gm7735D3YX18 52 aa6.01□□□□□ -1.45
Nup54-201ENSMUST00000038514 Krtap17-1A2A5X6 109 aa6□□□□□ -1.45
Nup54-201ENSMUST00000038514 2310046K23RikA0A0A6YVW6 87 aa5.98□□□□□ -1.45
Nup54-201ENSMUST00000038514 Rnf213E9Q555 5152 aaKnown RBP5.94□□□□□ -1.46
Nup54-201ENSMUST00000038514 Lce1iQ9D6P5 149 aa5.94□□□□□ -1.46
Nup54-201ENSMUST00000038514 Krtap19-9bQ99NG9 58 aa5.92□□□□□ -1.46
Nup54-201ENSMUST00000038514 Lce1a2Q9D1K4 149 aa5.91□□□□□ -1.46
Nup54-201ENSMUST00000038514 Krtap19-2Q925I0 141 aa5.84□□□□□ -1.48
Nup54-201ENSMUST00000038514 Krtap9-3Q3V2C1 136 aa5.8□□□□□ -1.48
Nup54-201ENSMUST00000038514 Krtap9-5A2A5X3 358 aa5.78□□□□□ -1.48
Nup54-201ENSMUST00000038514 SspoQ8CG65 4998 aa5.76□□□□□ -1.49
Nup54-201ENSMUST00000038514 Lce1hQ9D6R3 140 aa5.74□□□□□ -1.49
Nup54-201ENSMUST00000038514 A030003K21RikA0A1Y7VIM3 128 aa5.64□□□□□ -1.51
Nup54-201ENSMUST00000038514 A0A286YCP9 139 aa5.61□□□□□ -1.51
Nup54-201ENSMUST00000038514 Gm6217A0A1Y7VJK9 128 aa5.6□□□□□ -1.51
Nup54-201ENSMUST00000038514 Mt2P02798 61 aa5.48□□□□□ -1.53
Nup54-201ENSMUST00000038514 A0A1Y7VJ07 166 aa5.47□□□□□ -1.53
Nup54-201ENSMUST00000038514 Lce1dQ9D731 133 aa5.47□□□□□ -1.53
Nup54-201ENSMUST00000038514 Krtap4-2B1AQ85 167 aa5.45□□□□□ -1.54
Nup54-201ENSMUST00000038514 Gm6358A0A087WPH4 74 aa5.44□□□□□ -1.54
Nup54-201ENSMUST00000038514 Gm10061D3Z714 54 aa5.42□□□□□ -1.54
Nup54-201ENSMUST00000038514 Muc5bE9Q5I3 4800 aa5.41□□□□□ -1.54
Nup54-201ENSMUST00000038514 Sprr2gO70558 76 aa5.34□□□□□ -1.55
Nup54-201ENSMUST00000038514 Lce1eQ9D139 143 aa5.29□□□□□ -1.56
Nup54-201ENSMUST00000038514 Sprr2dO70555 85 aa5.24□□□□□ -1.57
Nup54-201ENSMUST00000038514 Gm11938Q9D3H4 131 aa5.24□□□□□ -1.57
Nup54-201ENSMUST00000038514 Gm11569B1AQB1 180 aa5.23□□□□□ -1.57
Nup54-201ENSMUST00000038514 4933428G20RikQ9D3X4 101 aa5.23□□□□□ -1.57
Nup54-201ENSMUST00000038514 Gm10272F7CZ33 110 aa5.14□□□□□ -1.59
Nup54-201ENSMUST00000038514 Krtap22-2J3QNX6 67 aa5.12□□□□□ -1.59
Nup54-201ENSMUST00000038514 A030014E15RikA0A1Y7VJV2 120 aa5.1□□□□□ -1.59
Nup54-201ENSMUST00000038514 Gm11562A0PK51 136 aa5□□□□□ -1.61
Nup54-201ENSMUST00000038514 Lce1cQ9D1C5 147 aa5□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms