RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Gm11555B1AQ89 175 aa7.53□□□□□ -1.2
Tpm3-201ENSMUST00000029549 Gm9821Q8K076 103 aa7.52□□□□□ -1.21
Tpm3-201ENSMUST00000029549 Gm17416Q30KP4 66 aa7.48□□□□□ -1.21
Tpm3-201ENSMUST00000029549 A0A1Y7VJH8 109 aa7.44□□□□□ -1.22
Tpm3-201ENSMUST00000029549 Ndufs5Q99LY9 106 aa7.44□□□□□ -1.22
Tpm3-201ENSMUST00000029549 Ubr4A2AN08 5180 aa7.43□□□□□ -1.22
Tpm3-201ENSMUST00000029549 Hmcn2A2AJ76 5100 aa7.41□□□□□ -1.22
Tpm3-201ENSMUST00000029549 Gm11563B1AQ90 168 aa7.4□□□□□ -1.23
Tpm3-201ENSMUST00000029549 Krtap4-7Q9D732 168 aa7.4□□□□□ -1.23
Tpm3-201ENSMUST00000029549 Gm17606F6ZL36 78 aa7.36□□□□□ -1.23
Tpm3-201ENSMUST00000029549 Gm7735D3YX18 52 aa7.32□□□□□ -1.24
Tpm3-201ENSMUST00000029549 Gm9789Q8BIG3 52 aa7.31□□□□□ -1.24
Tpm3-201ENSMUST00000029549 Prm1P02319 51 aa7.29□□□□□ -1.24
Tpm3-201ENSMUST00000029549 Gm10382Q3V0T5 144 aa7.29□□□□□ -1.24
Tpm3-201ENSMUST00000029549 Krtap3-1A2A591 98 aa7.29□□□□□ -1.24
Tpm3-201ENSMUST00000029549 2210017I01RikA0A0A6YVV1 95 aa7.28□□□□□ -1.24
Tpm3-201ENSMUST00000029549 Gm20537G3UYK7 97 aa7.28□□□□□ -1.24
Tpm3-201ENSMUST00000029549 Pla2g10Q9QXX3 151 aa7.25□□□□□ -1.25
Tpm3-201ENSMUST00000029549 4932415D10RikA0A1W2P6U8 4986 aa7.25□□□□□ -1.25
Tpm3-201ENSMUST00000029549 Gm9955Q8CEJ8 102 aa7.24□□□□□ -1.25
Tpm3-201ENSMUST00000029549 2310057N15RikQ9D6T8 200 aa7.24□□□□□ -1.25
Tpm3-201ENSMUST00000029549 Sec61bQ9CQS8 96 aaKnown RBP7.2□□□□□ -1.26
Tpm3-201ENSMUST00000029549 Crct1Q6PAI5 102 aa7.17□□□□□ -1.26
Tpm3-201ENSMUST00000029549 Gm3880A0A1B0GSB3 72 aa7.12□□□□□ -1.27
Tpm3-201ENSMUST00000029549 Krtap13-1Q8K198 168 aa7.12□□□□□ -1.27
Tpm3-201ENSMUST00000029549 Krtap28-10A0A1Y7VP58 119 aa7.1□□□□□ -1.27
Tpm3-201ENSMUST00000029549 ZanO88799 5376 aa7.06□□□□□ -1.28
Tpm3-201ENSMUST00000029549 A0A1Y7VLE6 161 aa7.06□□□□□ -1.28
Tpm3-201ENSMUST00000029549 Krtap1-3A2A588 173 aa7.05□□□□□ -1.28
Tpm3-201ENSMUST00000029549 Gm10318A0A1W2P728 225 aa7.04□□□□□ -1.28
Tpm3-201ENSMUST00000029549 Krtap28-13A0A087WQP5 138 aa7□□□□□ -1.29
Tpm3-201ENSMUST00000029549 BC029722A0A0N4SW31 51 aa7□□□□□ -1.29
Tpm3-201ENSMUST00000029549 Krtap1-5A2A590 122 aa6.99□□□□□ -1.29
Tpm3-201ENSMUST00000029549 Fam229aB2KGE5 128 aa6.94□□□□□ -1.3
Tpm3-201ENSMUST00000029549 Krtap16-3Q8C1I6 86 aa6.92□□□□□ -1.3
Tpm3-201ENSMUST00000029549 A030005K14RikA0A1Y7VNY1 122 aa6.92□□□□□ -1.3
Tpm3-201ENSMUST00000029549 LorP18165 486 aa6.91□□□□□ -1.3
Tpm3-201ENSMUST00000029549 Fat4Q2PZL6 4981 aa6.9□□□□□ -1.31
Tpm3-201ENSMUST00000029549 Gm12216A0A1W2P827 62 aa6.89□□□□□ -1.31
Tpm3-201ENSMUST00000029549 Krtap19-1Q925H2 87 aa6.87□□□□□ -1.31
Tpm3-201ENSMUST00000029549 Krtap19-3Q925H6 87 aa6.87□□□□□ -1.31
Tpm3-201ENSMUST00000029549 B930094E09RikQ8C4T2 136 aa6.81□□□□□ -1.32
Tpm3-201ENSMUST00000029549 Romo1P60603 79 aa6.8□□□□□ -1.32
Tpm3-201ENSMUST00000029549 Rnf213E9Q555 5152 aaKnown RBP6.78□□□□□ -1.32
Tpm3-201ENSMUST00000029549 Gm17402F6Z0L5 76 aa6.78□□□□□ -1.32
Tpm3-201ENSMUST00000029549 Gm19426M0QWC7 77 aa6.73□□□□□ -1.33
Tpm3-201ENSMUST00000029549 Gm19402J3QJV4 266 aa6.69□□□□□ -1.34
Tpm3-201ENSMUST00000029549 CriptO70333 101 aa6.69□□□□□ -1.34
Tpm3-201ENSMUST00000029549 Gm21887J3QQ04 176 aa6.62□□□□□ -1.35
Tpm3-201ENSMUST00000029549 Spink7Q6IE32 76 aa6.62□□□□□ -1.35
Tpm3-201ENSMUST00000029549 Sprr2a3Q4KL71 83 aa6.61□□□□□ -1.35
Tpm3-201ENSMUST00000029549 Sprr2a1Q9CQK8 83 aa6.61□□□□□ -1.35
Tpm3-201ENSMUST00000029549 Krtap1-4Q3V2D6 188 aa6.56□□□□□ -1.36
Tpm3-201ENSMUST00000029549 Gm10061D3Z714 54 aa6.52□□□□□ -1.37
Tpm3-201ENSMUST00000029549 SspoQ8CG65 4998 aa6.5□□□□□ -1.37
Tpm3-201ENSMUST00000029549 Mp68P56379 58 aa6.5□□□□□ -1.37
Tpm3-201ENSMUST00000029549 Gm20538F6Z9R1 75 aa6.48□□□□□ -1.37
Tpm3-201ENSMUST00000029549 Krtap4-2B1AQ85 167 aa6.47□□□□□ -1.37
Tpm3-201ENSMUST00000029549 A030005L19RikA0A1Y7VIU2 113 aa6.42□□□□□ -1.38
Tpm3-201ENSMUST00000029549 Gm11569B1AQB1 180 aa6.34□□□□□ -1.39
Tpm3-201ENSMUST00000029549 Krtap17-1A2A5X6 109 aa6.34□□□□□ -1.39
Tpm3-201ENSMUST00000029549 Lce1jD3YUU5 139 aa6.33□□□□□ -1.4
Tpm3-201ENSMUST00000029549 Gm7544A0A1Y7VJ58 118 aa6.31□□□□□ -1.4
Tpm3-201ENSMUST00000029549 Krtap12-1Q9Z287 130 aa6.31□□□□□ -1.4
Tpm3-201ENSMUST00000029549 A0A1Y7VJ07 166 aa6.29□□□□□ -1.4
Tpm3-201ENSMUST00000029549 Krtap19-9aF8WH65 55 aa6.27□□□□□ -1.41
Tpm3-201ENSMUST00000029549 Camk2n1Q6QWF9 78 aa6.25□□□□□ -1.41
Tpm3-201ENSMUST00000029549 Gm19668J3QMD1 248 aa6.24□□□□□ -1.41
Tpm3-201ENSMUST00000029549 Krtap7-1Q9D3I6 87 aa6.24□□□□□ -1.41
Tpm3-201ENSMUST00000029549 Gm40193A0A1B0GT39 78 aa6.17□□□□□ -1.42
Tpm3-201ENSMUST00000029549 Krtap9-5A2A5X3 358 aa6.15□□□□□ -1.43
Tpm3-201ENSMUST00000029549 Krtap19-2Q925I0 141 aa6.14□□□□□ -1.43
Tpm3-201ENSMUST00000029549 Prm2P07978 107 aa6.11□□□□□ -1.43
Tpm3-201ENSMUST00000029549 A030014E15RikA0A1Y7VJV2 120 aa6.09□□□□□ -1.44
Tpm3-201ENSMUST00000029549 Muc5bE9Q5I3 4800 aa6.02□□□□□ -1.45
Tpm3-201ENSMUST00000029549 Ndufaf8A2AMZ4 74 aa6□□□□□ -1.45
Tpm3-201ENSMUST00000029549 Lce1gQ9D195 139 aa5.99□□□□□ -1.45
Tpm3-201ENSMUST00000029549 Mdn1A2ANY6 5589 aaKnown RBP5.97□□□□□ -1.45
Tpm3-201ENSMUST00000029549 Lce1iQ9D6P5 149 aa5.95□□□□□ -1.46
Tpm3-201ENSMUST00000029549 A0A286YCP9 139 aa5.92□□□□□ -1.46
Tpm3-201ENSMUST00000029549 Syne2Q6ZWQ0 6874 aaKnown RBP5.91□□□□□ -1.46
Tpm3-201ENSMUST00000029549 Gm11562A0PK51 136 aa5.9□□□□□ -1.46
Tpm3-201ENSMUST00000029549 Lce1a2Q9D1K4 149 aa5.89□□□□□ -1.47
Tpm3-201ENSMUST00000029549 Krtap8-1O08633 61 aa5.87□□□□□ -1.47
Tpm3-201ENSMUST00000029549 Krtap4-6Q3V4B7 195 aa5.86□□□□□ -1.47
Tpm3-201ENSMUST00000029549 Gm6358A0A087WPH4 74 aa5.85□□□□□ -1.47
Tpm3-201ENSMUST00000029549 Gm11596B1AQB0 205 aa5.82□□□□□ -1.48
Tpm3-201ENSMUST00000029549 Krtap19-9bQ99NG9 58 aa5.8□□□□□ -1.48
Tpm3-201ENSMUST00000029549 Tnp1P10856 55 aa5.79□□□□□ -1.48
Tpm3-201ENSMUST00000029549 Mt2P02798 61 aa5.6□□□□□ -1.51
Tpm3-201ENSMUST00000029549 A030003K21RikA0A1Y7VIM3 128 aa5.6□□□□□ -1.51
Tpm3-201ENSMUST00000029549 Gm6217A0A1Y7VJK9 128 aa5.6□□□□□ -1.51
Tpm3-201ENSMUST00000029549 Gm11564A2A4L9 201 aa5.58□□□□□ -1.52
Tpm3-201ENSMUST00000029549 Gm11595B1AQA7 289 aa5.58□□□□□ -1.52
Tpm3-201ENSMUST00000029549 Krtap4-8B1AQA8 209 aa5.58□□□□□ -1.52
Tpm3-201ENSMUST00000029549 Krtap9-3Q3V2C1 136 aa5.51□□□□□ -1.53
Tpm3-201ENSMUST00000029549 2310046K23RikA0A0A6YVW6 87 aa5.5□□□□□ -1.53
Tpm3-201ENSMUST00000029549 Lce1hQ9D6R3 140 aa5.47□□□□□ -1.53
Tpm3-201ENSMUST00000029549 Fsip2A2ARZ3 6995 aa5.46□□□□□ -1.53
Tpm3-201ENSMUST00000029549 Gm38119A0A0A6YX29 146 aa5.46□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms