RNA–Protein interactions for RNA: ENSMUST00000026073.12

Trub1-202, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trub1, Length 3,795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-202ENSMUST00000026073 Dync1h1Q9JHU4 4644 aaKnown RBP4.59□□□□□ -1.68
Trub1-202ENSMUST00000026073 Kmt2cQ8BRH4 4903 aa4.59□□□□□ -1.68
Trub1-202ENSMUST00000026073 Lrp1Q91ZX7 4545 aaKnown RBP4.58□□□□□ -1.68
Trub1-202ENSMUST00000026073 Abca13Q5SSE9 5034 aa4.58□□□□□ -1.68
Trub1-202ENSMUST00000026073 Prm2P07978 107 aa4.57□□□□□ -1.68
Trub1-202ENSMUST00000026073 Mycbp2Q7TPH6 4711 aa4.57□□□□□ -1.68
Trub1-202ENSMUST00000026073 Vps13bQ80TY5 3993 aa4.56□□□□□ -1.68
Trub1-202ENSMUST00000026073 Fat1A0A1L1SQU7 4645 aa4.56□□□□□ -1.68
Trub1-202ENSMUST00000026073 Dnah1E9Q8T7 4250 aa4.55□□□□□ -1.68
Trub1-202ENSMUST00000026073 Krtap28-10A0A1Y7VP58 119 aa4.54□□□□□ -1.68
Trub1-202ENSMUST00000026073 Dnhd1D3Z2X2 4750 aa4.53□□□□□ -1.68
Trub1-202ENSMUST00000026073 Krtap19-5O08632 62 aa4.52□□□□□ -1.69
Trub1-202ENSMUST00000026073 Crct1Q6PAI5 102 aa4.51□□□□□ -1.69
Trub1-202ENSMUST00000026073 Fam229aB2KGE5 128 aa4.51□□□□□ -1.69
Trub1-202ENSMUST00000026073 Gm20538F6Z9R1 75 aa4.5□□□□□ -1.69
Trub1-202ENSMUST00000026073 Sec61bQ9CQS8 96 aaKnown RBP4.5□□□□□ -1.69
Trub1-202ENSMUST00000026073 Dnah8Q91XQ0 4731 aa4.48□□□□□ -1.69
Trub1-202ENSMUST00000026073 Camk2n1Q6QWF9 78 aa4.48□□□□□ -1.69
Trub1-202ENSMUST00000026073 ApobE9Q414 4505 aa4.47□□□□□ -1.69
Trub1-202ENSMUST00000026073 Ndufaf8A2AMZ4 74 aa4.46□□□□□ -1.7
Trub1-202ENSMUST00000026073 Dnah2P0C6F1 4456 aa4.45□□□□□ -1.7
Trub1-202ENSMUST00000026073 Ubr4A2AN08 5180 aa4.41□□□□□ -1.7
Trub1-202ENSMUST00000026073 A0A1Y7VLE6 161 aa4.4□□□□□ -1.7
Trub1-202ENSMUST00000026073 4932415D10RikA0A1W2P6U8 4986 aa4.4□□□□□ -1.71
Trub1-202ENSMUST00000026073 Krtap28-13A0A087WQP5 138 aa4.38□□□□□ -1.71
Trub1-202ENSMUST00000026073 B930094E09RikQ8C4T2 136 aa4.38□□□□□ -1.71
Trub1-202ENSMUST00000026073 Pkd1O08852 4293 aa4.37□□□□□ -1.71
Trub1-202ENSMUST00000026073 Gm17416Q30KP4 66 aa4.32□□□□□ -1.72
Trub1-202ENSMUST00000026073 2210017I01RikA0A0A6YVV1 95 aa4.32□□□□□ -1.72
Trub1-202ENSMUST00000026073 Ush2AQ2QI47 5193 aa4.32□□□□□ -1.72
Trub1-202ENSMUST00000026073 Krtap13-1Q8K198 168 aa4.31□□□□□ -1.72
Trub1-202ENSMUST00000026073 Krtap3-1A2A591 98 aa4.3□□□□□ -1.72
Trub1-202ENSMUST00000026073 Gm7735D3YX18 52 aa4.25□□□□□ -1.73
Trub1-202ENSMUST00000026073 Fat2Q5F226 4351 aa4.24□□□□□ -1.73
Trub1-202ENSMUST00000026073 Prm1P02319 51 aa4.22□□□□□ -1.73
Trub1-202ENSMUST00000026073 A030005L19RikA0A1Y7VIU2 113 aa4.21□□□□□ -1.74
Trub1-202ENSMUST00000026073 Krtap17-1A2A5X6 109 aa4.21□□□□□ -1.74
Trub1-202ENSMUST00000026073 A030005K14RikA0A1Y7VNY1 122 aa4.2□□□□□ -1.74
Trub1-202ENSMUST00000026073 Krtap4-1Q3UUY3 169 aa4.19□□□□□ -1.74
Trub1-202ENSMUST00000026073 Pkhd1E9PZ36 4059 aa4.16□□□□□ -1.74
Trub1-202ENSMUST00000026073 Gm19402J3QJV4 266 aa4.15□□□□□ -1.74
Trub1-202ENSMUST00000026073 Hmcn2A2AJ76 5100 aa4.15□□□□□ -1.74
Trub1-202ENSMUST00000026073 Pkhd1l1Q80ZA4 4249 aa4.14□□□□□ -1.75
Trub1-202ENSMUST00000026073 Gm9112A2AI92 75 aa4.13□□□□□ -1.75
Trub1-202ENSMUST00000026073 Gm9789Q8BIG3 52 aa4.12□□□□□ -1.75
Trub1-202ENSMUST00000026073 LorP18165 486 aa4.1□□□□□ -1.75
Trub1-202ENSMUST00000026073 Gm19668J3QMD1 248 aa4.05□□□□□ -1.76
Trub1-202ENSMUST00000026073 Gm40193A0A1B0GT39 78 aa4.03□□□□□ -1.76
Trub1-202ENSMUST00000026073 Rnf213E9Q555 5152 aaKnown RBP4.02□□□□□ -1.77
Trub1-202ENSMUST00000026073 Tnp1P10856 55 aa4.01□□□□□ -1.77
Trub1-202ENSMUST00000026073 Mdn1A2ANY6 5589 aaKnown RBP3.98□□□□□ -1.77
Trub1-202ENSMUST00000026073 Krtap7-1Q9D3I6 87 aa3.98□□□□□ -1.77
Trub1-202ENSMUST00000026073 Gm11555B1AQ89 175 aa3.96□□□□□ -1.78
Trub1-202ENSMUST00000026073 Fat4Q2PZL6 4981 aa3.95□□□□□ -1.78
Trub1-202ENSMUST00000026073 Gm17402F6Z0L5 76 aa3.95□□□□□ -1.78
Trub1-202ENSMUST00000026073 Gm7544A0A1Y7VJ58 118 aa3.92□□□□□ -1.78
Trub1-202ENSMUST00000026073 ZanO88799 5376 aa3.91□□□□□ -1.78
Trub1-202ENSMUST00000026073 A0A1Y7VJ07 166 aa3.91□□□□□ -1.78
Trub1-202ENSMUST00000026073 Krtap1-5A2A590 122 aa3.91□□□□□ -1.78
Trub1-202ENSMUST00000026073 Krtap4-2B1AQ85 167 aa3.91□□□□□ -1.78
Trub1-202ENSMUST00000026073 Krtap1-3A2A588 173 aa3.89□□□□□ -1.79
Trub1-202ENSMUST00000026073 Gm11563B1AQ90 168 aa3.89□□□□□ -1.79
Trub1-202ENSMUST00000026073 Krtap4-7Q9D732 168 aa3.89□□□□□ -1.79
Trub1-202ENSMUST00000026073 Sprr2a3Q4KL71 83 aa3.87□□□□□ -1.79
Trub1-202ENSMUST00000026073 Sprr2a1Q9CQK8 83 aa3.87□□□□□ -1.79
Trub1-202ENSMUST00000026073 Krtap16-3Q8C1I6 86 aa3.85□□□□□ -1.79
Trub1-202ENSMUST00000026073 Krtap1-4Q3V2D6 188 aa3.82□□□□□ -1.8
Trub1-202ENSMUST00000026073 Gm11569B1AQB1 180 aa3.81□□□□□ -1.8
Trub1-202ENSMUST00000026073 Syne2Q6ZWQ0 6874 aaKnown RBP3.8□□□□□ -1.8
Trub1-202ENSMUST00000026073 Krtap19-3Q925H6 87 aa3.78□□□□□ -1.8
Trub1-202ENSMUST00000026073 Gm10061D3Z714 54 aa3.78□□□□□ -1.8
Trub1-202ENSMUST00000026073 Lce1gQ9D195 139 aa3.75□□□□□ -1.81
Trub1-202ENSMUST00000026073 A030014E15RikA0A1Y7VJV2 120 aa3.75□□□□□ -1.81
Trub1-202ENSMUST00000026073 Krtap19-1Q925H2 87 aa3.73□□□□□ -1.81
Trub1-202ENSMUST00000026073 Krtap12-1Q9Z287 130 aa3.7□□□□□ -1.82
Trub1-202ENSMUST00000026073 Fsip2A2ARZ3 6995 aa3.7□□□□□ -1.82
Trub1-202ENSMUST00000026073 Gm11562A0PK51 136 aa3.7□□□□□ -1.82
Trub1-202ENSMUST00000026073 Krtap19-9aF8WH65 55 aa3.69□□□□□ -1.82
Trub1-202ENSMUST00000026073 Lce1jD3YUU5 139 aa3.66□□□□□ -1.82
Trub1-202ENSMUST00000026073 A030003K21RikA0A1Y7VIM3 128 aa3.66□□□□□ -1.82
Trub1-202ENSMUST00000026073 Krtap4-6Q3V4B7 195 aa3.63□□□□□ -1.83
Trub1-202ENSMUST00000026073 Gm11596B1AQB0 205 aa3.61□□□□□ -1.83
Trub1-202ENSMUST00000026073 Gm6358A0A087WPH4 74 aa3.57□□□□□ -1.84
Trub1-202ENSMUST00000026073 Syne1Q6ZWR6 8799 aa3.55□□□□□ -1.84
Trub1-202ENSMUST00000026073 Krtap9-5A2A5X3 358 aa3.54□□□□□ -1.84
Trub1-202ENSMUST00000026073 Krtap19-9bQ99NG9 58 aa3.51□□□□□ -1.85
Trub1-202ENSMUST00000026073 Muc16A0A140LJ72 8478 aa3.48□□□□□ -1.85
Trub1-202ENSMUST00000026073 Sprr2kO70562 68 aa3.46□□□□□ -1.86
Trub1-202ENSMUST00000026073 Muc5bE9Q5I3 4800 aa3.46□□□□□ -1.86
Trub1-202ENSMUST00000026073 SspoQ8CG65 4998 aa3.44□□□□□ -1.86
Trub1-202ENSMUST00000026073 Gm6217A0A1Y7VJK9 128 aa3.44□□□□□ -1.86
Trub1-202ENSMUST00000026073 Gm11564A2A4L9 201 aa3.43□□□□□ -1.86
Trub1-202ENSMUST00000026073 Gm11595B1AQA7 289 aa3.43□□□□□ -1.86
Trub1-202ENSMUST00000026073 Krtap4-8B1AQA8 209 aa3.43□□□□□ -1.86
Trub1-202ENSMUST00000026073 Krtap19-2Q925I0 141 aa3.41□□□□□ -1.86
Trub1-202ENSMUST00000026073 Mt4P47945 62 aa3.38□□□□□ -1.87
Trub1-202ENSMUST00000026073 Krtap4-9B1AQA9 244 aa3.38□□□□□ -1.87
Trub1-202ENSMUST00000026073 Krtap8-1O08633 61 aa3.37□□□□□ -1.87
Trub1-202ENSMUST00000026073 Lce1iQ9D6P5 149 aa3.35□□□□□ -1.87
Trub1-202ENSMUST00000026073 Mt2P02798 61 aa3.34□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms