RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 TnxbO35452 4006 aa4.94□□□□□ -1.62
Pcdhac1-201ENSMUST00000007584 Gm18596A0A1W2P860 280 aa4.93□□□□□ -1.62
Pcdhac1-201ENSMUST00000007584 Krtap1-4Q3V2D6 188 aa4.92□□□□□ -1.62
Pcdhac1-201ENSMUST00000007584 Csmd3Q80T79 3707 aa4.92□□□□□ -1.62
Pcdhac1-201ENSMUST00000007584 PlecQ9QXS1 4691 aaKnown RBP4.88□□□□□ -1.63
Pcdhac1-201ENSMUST00000007584 Dnah9B1AR51 4484 aa4.86□□□□□ -1.63
Pcdhac1-201ENSMUST00000007584 Krtap8-1O08633 61 aa4.84□□□□□ -1.63
Pcdhac1-201ENSMUST00000007584 A0A1Y7VLE6 161 aa4.83□□□□□ -1.64
Pcdhac1-201ENSMUST00000007584 Dync2h1Q45VK7 4306 aa4.82□□□□□ -1.64
Pcdhac1-201ENSMUST00000007584 PrkdcP97313 4128 aa4.81□□□□□ -1.64
Pcdhac1-201ENSMUST00000007584 Vps13dB1ART2 4390 aa4.79□□□□□ -1.64
Pcdhac1-201ENSMUST00000007584 Dnah5Q8VHE6 4621 aa4.77□□□□□ -1.65
Pcdhac1-201ENSMUST00000007584 Fras1Q80T14 4010 aa4.71□□□□□ -1.66
Pcdhac1-201ENSMUST00000007584 Dnah2P0C6F1 4456 aa4.7□□□□□ -1.66
Pcdhac1-201ENSMUST00000007584 Gm10100J3QK64 120 aa4.67□□□□□ -1.66
Pcdhac1-201ENSMUST00000007584 LorP18165 486 aa4.67□□□□□ -1.66
Pcdhac1-201ENSMUST00000007584 ApobE9Q414 4505 aa4.66□□□□□ -1.66
Pcdhac1-201ENSMUST00000007584 Stard9Q80TF6 4561 aa4.64□□□□□ -1.67
Pcdhac1-201ENSMUST00000007584 Dnah7cA0A087WR13 4024 aa4.62□□□□□ -1.67
Pcdhac1-201ENSMUST00000007584 Dync1h1Q9JHU4 4644 aaKnown RBP4.6□□□□□ -1.67
Pcdhac1-201ENSMUST00000007584 Lrp1bQ9JI18 4599 aa4.6□□□□□ -1.67
Pcdhac1-201ENSMUST00000007584 Pkd1O08852 4293 aa4.58□□□□□ -1.68
Pcdhac1-201ENSMUST00000007584 Hectd4E9Q2E4 4418 aa4.58□□□□□ -1.68
Pcdhac1-201ENSMUST00000007584 Sprr2kO70562 68 aa4.57□□□□□ -1.68
Pcdhac1-201ENSMUST00000007584 Dnah7aE9Q0T8 4024 aa4.56□□□□□ -1.68
Pcdhac1-201ENSMUST00000007584 SacsQ9JLC8 4582 aa4.56□□□□□ -1.68
Pcdhac1-201ENSMUST00000007584 Gm10142J3KMP7 120 aa4.55□□□□□ -1.68
Pcdhac1-201ENSMUST00000007584 2310046K23RikA0A0A6YVW6 87 aa4.54□□□□□ -1.68
Pcdhac1-201ENSMUST00000007584 Lce3bQ9CQM7 98 aa4.52□□□□□ -1.69
Pcdhac1-201ENSMUST00000007584 Gm10272F7CZ33 110 aa4.51□□□□□ -1.69
Pcdhac1-201ENSMUST00000007584 Lce3cQ91V05 98 aa4.47□□□□□ -1.69
Pcdhac1-201ENSMUST00000007584 Fat1A0A1L1SQU7 4645 aa4.47□□□□□ -1.69
Pcdhac1-201ENSMUST00000007584 Fat2Q5F226 4351 aa4.44□□□□□ -1.7
Pcdhac1-201ENSMUST00000007584 Ryr3A2AGL3 4863 aa4.38□□□□□ -1.71
Pcdhac1-201ENSMUST00000007584 Lce3eF8VQJ0 98 aa4.37□□□□□ -1.71
Pcdhac1-201ENSMUST00000007584 Lce3fQ6PAI4 98 aa4.37□□□□□ -1.71
Pcdhac1-201ENSMUST00000007584 A030003K21RikA0A1Y7VIM3 128 aa4.36□□□□□ -1.71
Pcdhac1-201ENSMUST00000007584 Syne1Q6ZWR6 8799 aa4.32□□□□□ -1.72
Pcdhac1-201ENSMUST00000007584 Lce3dE9Q8V1 98 aa4.31□□□□□ -1.72
Pcdhac1-201ENSMUST00000007584 Lrp1Q91ZX7 4545 aaKnown RBP4.3□□□□□ -1.72
Pcdhac1-201ENSMUST00000007584 Fat3Q8BNA6 4555 aa4.3□□□□□ -1.72
Pcdhac1-201ENSMUST00000007584 Krtap9-5A2A5X3 358 aa4.29□□□□□ -1.72
Pcdhac1-201ENSMUST00000007584 Mycbp2Q7TPH6 4711 aa4.28□□□□□ -1.72
Pcdhac1-201ENSMUST00000007584 Sprr2gO70558 76 aa4.28□□□□□ -1.72
Pcdhac1-201ENSMUST00000007584 Pkhd1E9PZ36 4059 aa4.27□□□□□ -1.73
Pcdhac1-201ENSMUST00000007584 Krtap16-3Q8C1I6 86 aa4.27□□□□□ -1.73
Pcdhac1-201ENSMUST00000007584 Ryr1E9PZQ0 5035 aa4.25□□□□□ -1.73
Pcdhac1-201ENSMUST00000007584 Lce3aQ497I5 98 aa4.24□□□□□ -1.73
Pcdhac1-201ENSMUST00000007584 Ryr2E9Q401 4966 aaKnown RBP4.24□□□□□ -1.73
Pcdhac1-201ENSMUST00000007584 Vps13bQ80TY5 3993 aa4.24□□□□□ -1.73
Pcdhac1-201ENSMUST00000007584 Krtap19-3Q925H6 87 aa4.23□□□□□ -1.73
Pcdhac1-201ENSMUST00000007584 Dnah8Q91XQ0 4731 aa4.23□□□□□ -1.73
Pcdhac1-201ENSMUST00000007584 Pkhd1l1Q80ZA4 4249 aa4.2□□□□□ -1.74
Pcdhac1-201ENSMUST00000007584 Krtap22-2J3QNX6 67 aa4.14□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Mt2P02798 61 aa4.14□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Gm10024A0A0A0MQA4 119 aa4.12□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Krtap9-3Q3V2C1 136 aa4.12□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Krtap19-1Q925H2 87 aa4.12□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Kmt2cQ8BRH4 4903 aa4.11□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Lce1jD3YUU5 139 aa4.1□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Lce1gQ9D195 139 aa4.1□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Lce1iQ9D6P5 149 aa4.1□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Lce1hQ9D6R3 140 aa4.1□□□□□ -1.75
Pcdhac1-201ENSMUST00000007584 Lce1mQ9CR91 182 aa4.08□□□□□ -1.76
Pcdhac1-201ENSMUST00000007584 Gm6217A0A1Y7VJK9 128 aa4.05□□□□□ -1.76
Pcdhac1-201ENSMUST00000007584 Herc2Q4U2R1 4836 aa4.05□□□□□ -1.76
Pcdhac1-201ENSMUST00000007584 A0A1Y7VJH8 109 aa4.04□□□□□ -1.76
Pcdhac1-201ENSMUST00000007584 HydinQ80W93 5154 aa4.03□□□□□ -1.76
Pcdhac1-201ENSMUST00000007584 Kiaa1109A2AAE1 5005 aa4.02□□□□□ -1.77
Pcdhac1-201ENSMUST00000007584 Krtap28-10A0A1Y7VP58 119 aa4.01□□□□□ -1.77
Pcdhac1-201ENSMUST00000007584 Abca13Q5SSE9 5034 aa4□□□□□ -1.77
Pcdhac1-201ENSMUST00000007584 Lrp2A2ARV4 4660 aa3.96□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Krtap19-4Q925H7 84 aa3.96□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Dnhd1D3Z2X2 4750 aa3.96□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Gm38119A0A0A6YX29 146 aa3.95□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Krtap19-2Q925I0 141 aa3.95□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Gm7544A0A1Y7VJ58 118 aa3.94□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Sprr2iO70560 76 aa3.94□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Sprr2eO70556 76 aa3.93□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Birc6O88738 4882 aa3.93□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Lce1fB9EJP6 147 aa3.92□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Lce1cQ9D1C5 147 aa3.92□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Lce1lQ9D1G7 135 aa3.92□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Lce1dQ9D731 133 aa3.92□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Lce1eQ9D139 143 aa3.92□□□□□ -1.78
Pcdhac1-201ENSMUST00000007584 Lce1bQ9D149 137 aa3.86□□□□□ -1.79
Pcdhac1-201ENSMUST00000007584 Krtap31-1Q9D644 177 aa3.84□□□□□ -1.79
Pcdhac1-201ENSMUST00000007584 A030005L19RikA0A1Y7VIU2 113 aa3.8□□□□□ -1.8
Pcdhac1-201ENSMUST00000007584 PcloQ9QYX7 5068 aa3.79□□□□□ -1.8
Pcdhac1-201ENSMUST00000007584 Sprr2fO70557 76 aa3.79□□□□□ -1.8
Pcdhac1-201ENSMUST00000007584 A030005K14RikA0A1Y7VNY1 122 aa3.78□□□□□ -1.8
Pcdhac1-201ENSMUST00000007584 Krtap1-3A2A588 173 aa3.77□□□□□ -1.81
Pcdhac1-201ENSMUST00000007584 Krtap28-13A0A087WQP5 138 aa3.76□□□□□ -1.81
Pcdhac1-201ENSMUST00000007584 Mdn1A2ANY6 5589 aaKnown RBP3.73□□□□□ -1.81
Pcdhac1-201ENSMUST00000007584 Sprr2hO70559 108 aa3.73□□□□□ -1.81
Pcdhac1-201ENSMUST00000007584 Prm1P02319 51 aa3.7□□□□□ -1.82
Pcdhac1-201ENSMUST00000007584 Muc16A0A140LJ72 8478 aa3.67□□□□□ -1.82
Pcdhac1-201ENSMUST00000007584 Gm9789Q8BIG3 52 aa3.67□□□□□ -1.82
Pcdhac1-201ENSMUST00000007584 Gm11938Q9D3H4 131 aa3.66□□□□□ -1.82
Pcdhac1-201ENSMUST00000007584 Sprr2dO70555 85 aa3.64□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 72.8 ms