RNA–Protein interactions for RNA: ENSMUST00000001701.3

Hoxc11-201, Transcript of Homeobox protein Hox-C11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc11, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11-201ENSMUST00000001701 Gm11563B1AQ90 168 aa9.99□□□□□ -0.81
Hoxc11-201ENSMUST00000001701 Krtap4-7Q9D732 168 aa9.99□□□□□ -0.81
Hoxc11-201ENSMUST00000001701 Sec61gP60060 68 aa9.96□□□□□ -0.81
Hoxc11-201ENSMUST00000001701 Sec61bQ9CQS8 96 aaKnown RBP9.96□□□□□ -0.81
Hoxc11-201ENSMUST00000001701 Krtap3-1A2A591 98 aa9.87□□□□□ -0.83
Hoxc11-201ENSMUST00000001701 Gm17606F6ZL36 78 aa9.8□□□□□ -0.84
Hoxc11-201ENSMUST00000001701 Gm10382Q3V0T5 144 aa9.79□□□□□ -0.84
Hoxc11-201ENSMUST00000001701 Krtap13-1Q8K198 168 aa9.78□□□□□ -0.84
Hoxc11-201ENSMUST00000001701 Ush2AQ2QI47 5193 aa9.73□□□□□ -0.85
Hoxc11-201ENSMUST00000001701 Krtap16-3Q8C1I6 86 aa9.72□□□□□ -0.85
Hoxc11-201ENSMUST00000001701 Gm3646F6S692 53 aa9.71□□□□□ -0.86
Hoxc11-201ENSMUST00000001701 1700042G07RikB1AUF7 90 aa9.69□□□□□ -0.86
Hoxc11-201ENSMUST00000001701 Crct1Q6PAI5 102 aa9.67□□□□□ -0.86
Hoxc11-201ENSMUST00000001701 Hmcn2A2AJ76 5100 aa9.66□□□□□ -0.86
Hoxc11-201ENSMUST00000001701 Gm18596A0A1W2P860 280 aa9.65□□□□□ -0.87
Hoxc11-201ENSMUST00000001701 Gm11555B1AQ89 175 aa9.64□□□□□ -0.87
Hoxc11-201ENSMUST00000001701 Krtap19-1Q925H2 87 aa9.62□□□□□ -0.87
Hoxc11-201ENSMUST00000001701 Krtap1-5A2A590 122 aa9.6□□□□□ -0.87
Hoxc11-201ENSMUST00000001701 Gm10318A0A1W2P728 225 aa9.59□□□□□ -0.87
Hoxc11-201ENSMUST00000001701 Gm20537G3UYK7 97 aa9.58□□□□□ -0.88
Hoxc11-201ENSMUST00000001701 Ubr4A2AN08 5180 aa9.58□□□□□ -0.88
Hoxc11-201ENSMUST00000001701 Krtap19-3Q925H6 87 aa9.57□□□□□ -0.88
Hoxc11-201ENSMUST00000001701 Fam229aB2KGE5 128 aa9.56□□□□□ -0.88
Hoxc11-201ENSMUST00000001701 Ndufs5Q99LY9 106 aa9.55□□□□□ -0.88
Hoxc11-201ENSMUST00000001701 Gm9955Q8CEJ8 102 aa9.53□□□□□ -0.88
Hoxc11-201ENSMUST00000001701 Gm9789Q8BIG3 52 aa9.5□□□□□ -0.89
Hoxc11-201ENSMUST00000001701 Krtap1-3A2A588 173 aa9.46□□□□□ -0.89
Hoxc11-201ENSMUST00000001701 ZanO88799 5376 aa9.45□□□□□ -0.9
Hoxc11-201ENSMUST00000001701 Prm1P02319 51 aa9.43□□□□□ -0.9
Hoxc11-201ENSMUST00000001701 4932415D10RikA0A1W2P6U8 4986 aa9.41□□□□□ -0.9
Hoxc11-201ENSMUST00000001701 BC029722A0A0N4SW31 51 aa9.41□□□□□ -0.9
Hoxc11-201ENSMUST00000001701 Gm7735D3YX18 52 aa9.38□□□□□ -0.91
Hoxc11-201ENSMUST00000001701 Krtap4-2B1AQ85 167 aa9.35□□□□□ -0.91
Hoxc11-201ENSMUST00000001701 Gm19402J3QJV4 266 aa9.35□□□□□ -0.91
Hoxc11-201ENSMUST00000001701 Gm3880A0A1B0GSB3 72 aa9.29□□□□□ -0.92
Hoxc11-201ENSMUST00000001701 Pla2g10Q9QXX3 151 aa9.22□□□□□ -0.93
Hoxc11-201ENSMUST00000001701 LorP18165 486 aa9.2□□□□□ -0.94
Hoxc11-201ENSMUST00000001701 Gm19426M0QWC7 77 aa9.16□□□□□ -0.94
Hoxc11-201ENSMUST00000001701 Fat4Q2PZL6 4981 aa9.11□□□□□ -0.95
Hoxc11-201ENSMUST00000001701 Krtap1-4Q3V2D6 188 aa9.11□□□□□ -0.95
Hoxc11-201ENSMUST00000001701 Rnf213E9Q555 5152 aaKnown RBP9.11□□□□□ -0.95
Hoxc11-201ENSMUST00000001701 B930094E09RikQ8C4T2 136 aa9.05□□□□□ -0.96
Hoxc11-201ENSMUST00000001701 Gm17402F6Z0L5 76 aa9.01□□□□□ -0.97
Hoxc11-201ENSMUST00000001701 Spink7Q6IE32 76 aa8.97□□□□□ -0.97
Hoxc11-201ENSMUST00000001701 Sprr2a3Q4KL71 83 aa8.91□□□□□ -0.98
Hoxc11-201ENSMUST00000001701 Sprr2a1Q9CQK8 83 aa8.91□□□□□ -0.98
Hoxc11-201ENSMUST00000001701 Lce1jD3YUU5 139 aa8.85□□□□□ -0.99
Hoxc11-201ENSMUST00000001701 CriptO70333 101 aa8.85□□□□□ -0.99
Hoxc11-201ENSMUST00000001701 Gm12216A0A1W2P827 62 aa8.85□□□□□ -0.99
Hoxc11-201ENSMUST00000001701 Romo1P60603 79 aa8.81□□□□□ -1
Hoxc11-201ENSMUST00000001701 Krtap12-1Q9Z287 130 aa8.76□□□□□ -1.01
Hoxc11-201ENSMUST00000001701 SspoQ8CG65 4998 aa8.75□□□□□ -1.01
Hoxc11-201ENSMUST00000001701 Krtap19-9aF8WH65 55 aa8.65□□□□□ -1.02
Hoxc11-201ENSMUST00000001701 Krtap17-1A2A5X6 109 aa8.61□□□□□ -1.03
Hoxc11-201ENSMUST00000001701 Krtap31-2Q8CAY5 177 aa8.58□□□□□ -1.04
Hoxc11-201ENSMUST00000001701 Gm10061D3Z714 54 aa8.51□□□□□ -1.05
Hoxc11-201ENSMUST00000001701 Prm2P07978 107 aa8.51□□□□□ -1.05
Hoxc11-201ENSMUST00000001701 Krtap19-2Q925I0 141 aa8.5□□□□□ -1.05
Hoxc11-201ENSMUST00000001701 Krtap9-5A2A5X3 358 aa8.45□□□□□ -1.06
Hoxc11-201ENSMUST00000001701 Gm19668J3QMD1 248 aa8.42□□□□□ -1.06
Hoxc11-201ENSMUST00000001701 Gm20538F6Z9R1 75 aa8.36□□□□□ -1.07
Hoxc11-201ENSMUST00000001701 Mp68P56379 58 aa8.36□□□□□ -1.07
Hoxc11-201ENSMUST00000001701 Camk2n1Q6QWF9 78 aa8.31□□□□□ -1.08
Hoxc11-201ENSMUST00000001701 Lce1iQ9D6P5 149 aa8.3□□□□□ -1.08
Hoxc11-201ENSMUST00000001701 Lce1a2Q9D1K4 149 aa8.22□□□□□ -1.09
Hoxc11-201ENSMUST00000001701 Krtap31-1Q9D644 177 aa8.18□□□□□ -1.1
Hoxc11-201ENSMUST00000001701 Muc5bE9Q5I3 4800 aa8.17□□□□□ -1.1
Hoxc11-201ENSMUST00000001701 Krtap7-1Q9D3I6 87 aa8.12□□□□□ -1.11
Hoxc11-201ENSMUST00000001701 Gm11569B1AQB1 180 aa8.07□□□□□ -1.12
Hoxc11-201ENSMUST00000001701 Gm6358A0A087WPH4 74 aa8.03□□□□□ -1.12
Hoxc11-201ENSMUST00000001701 Krtap8-1O08633 61 aa7.96□□□□□ -1.13
Hoxc11-201ENSMUST00000001701 Gm40193A0A1B0GT39 78 aa7.9□□□□□ -1.15
Hoxc11-201ENSMUST00000001701 Krtap19-9bQ99NG9 58 aa7.88□□□□□ -1.15
Hoxc11-201ENSMUST00000001701 Lce1hQ9D6R3 140 aa7.88□□□□□ -1.15
Hoxc11-201ENSMUST00000001701 Mt2P02798 61 aa7.86□□□□□ -1.15
Hoxc11-201ENSMUST00000001701 Lce1bQ9D149 137 aa7.76□□□□□ -1.17
Hoxc11-201ENSMUST00000001701 Ndufaf8A2AMZ4 74 aa7.68□□□□□ -1.18
Hoxc11-201ENSMUST00000001701 Mdn1A2ANY6 5589 aaKnown RBP7.61□□□□□ -1.19
Hoxc11-201ENSMUST00000001701 Tnp1P10856 55 aa7.59□□□□□ -1.19
Hoxc11-201ENSMUST00000001701 Krtap9-3Q3V2C1 136 aa7.57□□□□□ -1.2
Hoxc11-201ENSMUST00000001701 Gm38119A0A0A6YX29 146 aa7.52□□□□□ -1.2
Hoxc11-201ENSMUST00000001701 Krtap22-2J3QNX6 67 aa7.41□□□□□ -1.22
Hoxc11-201ENSMUST00000001701 Krtap4-6Q3V4B7 195 aa7.35□□□□□ -1.23
Hoxc11-201ENSMUST00000001701 Lce1gQ9D195 139 aa7.35□□□□□ -1.23
Hoxc11-201ENSMUST00000001701 Lce1eQ9D139 143 aa7.34□□□□□ -1.23
Hoxc11-201ENSMUST00000001701 2310046K23RikA0A0A6YVW6 87 aa7.25□□□□□ -1.25
Hoxc11-201ENSMUST00000001701 Gm11596B1AQB0 205 aa7.15□□□□□ -1.26
Hoxc11-201ENSMUST00000001701 Syne2Q6ZWQ0 6874 aaKnown RBP7.11□□□□□ -1.27
Hoxc11-201ENSMUST00000001701 Gm9112A2AI92 75 aa7.02□□□□□ -1.29
Hoxc11-201ENSMUST00000001701 Gm11559Q9D3H7 191 aa7□□□□□ -1.29
Hoxc11-201ENSMUST00000001701 Gm11564A2A4L9 201 aa6.99□□□□□ -1.29
Hoxc11-201ENSMUST00000001701 Gm11595B1AQA7 289 aa6.99□□□□□ -1.29
Hoxc11-201ENSMUST00000001701 Krtap4-8B1AQA8 209 aa6.99□□□□□ -1.29
Hoxc11-201ENSMUST00000001701 Gm11562A0PK51 136 aa6.91□□□□□ -1.3
Hoxc11-201ENSMUST00000001701 Gm10272F7CZ33 110 aa6.91□□□□□ -1.3
Hoxc11-201ENSMUST00000001701 Lce1a1Q9CQH5 143 aa6.86□□□□□ -1.31
Hoxc11-201ENSMUST00000001701 Mt4P47945 62 aa6.85□□□□□ -1.31
Hoxc11-201ENSMUST00000001701 Krtap4-9B1AQA9 244 aa6.82□□□□□ -1.32
Hoxc11-201ENSMUST00000001701 Fsip2A2ARZ3 6995 aa6.72□□□□□ -1.33
Hoxc11-201ENSMUST00000001701 Lce1dQ9D731 133 aa6.62□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms