RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Dnah1E9Q8T7 4250 aa3.53□□□□□ -1.84
Pdgfra-201ENSMUST00000000476 Dnah11E9Q7N9 4488 aa3.53□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 Lce1mQ9CR91 182 aa3.53□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 Dnah3Q8BW94 4083 aa3.52□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 Muc4Q8JZM8 3443 aa3.52□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 ApobE9Q414 4505 aa3.51□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 Dnah2P0C6F1 4456 aa3.51□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 Lce3bQ9CQM7 98 aa3.51□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 Dync1h1Q9JHU4 4644 aaKnown RBP3.51□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 Krtap9-5A2A5X3 358 aa3.49□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 SacsQ9JLC8 4582 aa3.49□□□□□ -1.85
Pdgfra-201ENSMUST00000000476 Krtap16-3Q8C1I6 86 aa3.45□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Dnah9B1AR51 4484 aa3.45□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Krtap19-3Q925H6 87 aa3.45□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 BsnO88737 3942 aa3.45□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Fat1A0A1L1SQU7 4645 aa3.44□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Pkd1O08852 4293 aa3.44□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Lce3cQ91V05 98 aa3.44□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Gm10272F7CZ33 110 aa3.42□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Dnah7bL7N1Y0 4068 aa3.42□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 TnxbO35452 4006 aa3.42□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 CubnQ9JLB4 3623 aa3.42□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Hspg2Q05793 3707 aaKnown RBP3.41□□□□□ -1.86
Pdgfra-201ENSMUST00000000476 Csmd3Q80T79 3707 aa3.39□□□□□ -1.87
Pdgfra-201ENSMUST00000000476 PrkdcP97313 4128 aa3.39□□□□□ -1.87
Pdgfra-201ENSMUST00000000476 Gm10100J3QK64 120 aa3.39□□□□□ -1.87
Pdgfra-201ENSMUST00000000476 Xirp2Q4U4S6 3784 aa3.38□□□□□ -1.87
Pdgfra-201ENSMUST00000000476 Lrp1bQ9JI18 4599 aa3.37□□□□□ -1.87
Pdgfra-201ENSMUST00000000476 Krtap19-1Q925H2 87 aa3.35□□□□□ -1.87
Pdgfra-201ENSMUST00000000476 Ryr1E9PZQ0 5035 aa3.35□□□□□ -1.87
Pdgfra-201ENSMUST00000000476 Prm1P02319 51 aa3.35□□□□□ -1.87
Pdgfra-201ENSMUST00000000476 Lce3eF8VQJ0 98 aa3.34□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Lce3fQ6PAI4 98 aa3.34□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Lce3dE9Q8V1 98 aa3.33□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Dnah8Q91XQ0 4731 aa3.32□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Gm10142J3KMP7 120 aa3.32□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Krtap22-2J3QNX6 67 aa3.31□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 2310046K23RikA0A0A6YVW6 87 aa3.3□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Mt2P02798 61 aa3.3□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Fras1Q80T14 4010 aa3.29□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Sprr2iO70560 76 aa3.29□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Mycbp2Q7TPH6 4711 aa3.28□□□□□ -1.88
Pdgfra-201ENSMUST00000000476 Gm38119A0A0A6YX29 146 aa3.27□□□□□ -1.89
Pdgfra-201ENSMUST00000000476 Hectd4E9Q2E4 4418 aa3.26□□□□□ -1.89
Pdgfra-201ENSMUST00000000476 Dnah6E9Q0B6 4144 aa3.26□□□□□ -1.89
Pdgfra-201ENSMUST00000000476 Fat3Q8BNA6 4555 aa3.25□□□□□ -1.89
Pdgfra-201ENSMUST00000000476 Lce3aQ497I5 98 aa3.25□□□□□ -1.89
Pdgfra-201ENSMUST00000000476 Dnhd1D3Z2X2 4750 aa3.22□□□□□ -1.89
Pdgfra-201ENSMUST00000000476 Krtap19-2Q925I0 141 aa3.22□□□□□ -1.89
Pdgfra-201ENSMUST00000000476 Kmt2aP55200 3966 aa3.22□□□□□ -1.89
Pdgfra-201ENSMUST00000000476 Herc1E9PZP8 4859 aa3.2□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Gm7735D3YX18 52 aa3.19□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Dnah7cA0A087WR13 4024 aa3.18□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Lce1jD3YUU5 139 aa3.18□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Lce1gQ9D195 139 aa3.18□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Lce1iQ9D6P5 149 aa3.18□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Lce1hQ9D6R3 140 aa3.18□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Krtap1-3A2A588 173 aa3.17□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Ryr2E9Q401 4966 aaKnown RBP3.16□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Lrp1Q91ZX7 4545 aaKnown RBP3.15□□□□□ -1.9
Pdgfra-201ENSMUST00000000476 Dnah7aE9Q0T8 4024 aa3.14□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Gm9789Q8BIG3 52 aa3.13□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Lce1fB9EJP6 147 aa3.12□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Lce1cQ9D1C5 147 aa3.12□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Lce1lQ9D1G7 135 aa3.12□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Lce1dQ9D731 133 aa3.12□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Gm10024A0A0A0MQA4 119 aa3.11□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Fat2Q5F226 4351 aa3.1□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Lce1bQ9D149 137 aa3.1□□□□□ -1.91
Pdgfra-201ENSMUST00000000476 Sprr2fO70557 76 aa3.07□□□□□ -1.92
Pdgfra-201ENSMUST00000000476 Lce1eQ9D139 143 aa3.06□□□□□ -1.92
Pdgfra-201ENSMUST00000000476 Sprr2eO70556 76 aa3.06□□□□□ -1.92
Pdgfra-201ENSMUST00000000476 Gm10061D3Z714 54 aa3.05□□□□□ -1.92
Pdgfra-201ENSMUST00000000476 Gm11569B1AQB1 180 aa3.03□□□□□ -1.92
Pdgfra-201ENSMUST00000000476 Krtap19-4Q925H7 84 aa3.02□□□□□ -1.93
Pdgfra-201ENSMUST00000000476 A0A1Y7VLE6 161 aa3.02□□□□□ -1.93
Pdgfra-201ENSMUST00000000476 Vps13bQ80TY5 3993 aa3.01□□□□□ -1.93
Pdgfra-201ENSMUST00000000476 Krtap9-3Q3V2C1 136 aa3.01□□□□□ -1.93
Pdgfra-201ENSMUST00000000476 Ryr3A2AGL3 4863 aa3□□□□□ -1.93
Pdgfra-201ENSMUST00000000476 Herc2Q4U2R1 4836 aa2.98□□□□□ -1.93
Pdgfra-201ENSMUST00000000476 Lrp2A2ARV4 4660 aa2.94□□□□□ -1.94
Pdgfra-201ENSMUST00000000476 Pkhd1l1Q80ZA4 4249 aa2.93□□□□□ -1.94
Pdgfra-201ENSMUST00000000476 Mt4P47945 62 aa2.93□□□□□ -1.94
Pdgfra-201ENSMUST00000000476 Kiaa1109A2AAE1 5005 aa2.89□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 Krtap17-1A2A5X6 109 aa2.88□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 Kmt2cQ8BRH4 4903 aa2.87□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 Krtap4-2B1AQ85 167 aa2.87□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 PcloQ9QYX7 5068 aa2.86□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 Pkhd1E9PZ36 4059 aa2.86□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 HydinQ80W93 5154 aa2.85□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 Krtap4-6Q3V4B7 195 aa2.85□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 Lce1a2Q9D1K4 149 aa2.85□□□□□ -1.95
Pdgfra-201ENSMUST00000000476 Birc6O88738 4882 aa2.81□□□□□ -1.96
Pdgfra-201ENSMUST00000000476 Sprr2hO70559 108 aa2.74□□□□□ -1.97
Pdgfra-201ENSMUST00000000476 Krtap31-1Q9D644 177 aa2.73□□□□□ -1.97
Pdgfra-201ENSMUST00000000476 Krtap4-1Q3UUY3 169 aa2.73□□□□□ -1.97
Pdgfra-201ENSMUST00000000476 Gm11562A0PK51 136 aa2.72□□□□□ -1.97
Pdgfra-201ENSMUST00000000476 A030003K21RikA0A1Y7VIM3 128 aa2.71□□□□□ -1.98
Pdgfra-201ENSMUST00000000476 Sprr2dO70555 85 aa2.7□□□□□ -1.98
Pdgfra-201ENSMUST00000000476 Krtap28-10A0A1Y7VP58 119 aa2.7□□□□□ -1.98
Retrieved 100 of 22,080 RNA–protein pairs in 93.6 ms