RNA–Protein interactions for RNA: ENSMUST00000000388.14

Ccm2-201, Transcript of Cerebral cavernous malformations protein 2 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccm2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccm2-201ENSMUST00000000388 Cox6b2Q80ZN9 88 aa13.4□□□□□ -0.26
Ccm2-201ENSMUST00000000388 Ubr4A2AN08 5180 aa13.38□□□□□ -0.27
Ccm2-201ENSMUST00000000388 Gm17416Q30KP4 66 aa13.38□□□□□ -0.27
Ccm2-201ENSMUST00000000388 2310057N15RikQ9D6T8 200 aa13.28□□□□□ -0.28
Ccm2-201ENSMUST00000000388 4932415D10RikA0A1W2P6U8 4986 aa13.21□□□□□ -0.29
Ccm2-201ENSMUST00000000388 Sec61bQ9CQS8 96 aaKnown RBP13.15□□□□□ -0.3
Ccm2-201ENSMUST00000000388 2210017I01RikA0A0A6YVV1 95 aa13.02□□□□□ -0.32
Ccm2-201ENSMUST00000000388 Crct1Q6PAI5 102 aa13.02□□□□□ -0.32
Ccm2-201ENSMUST00000000388 Gm3646F6S692 53 aa13.01□□□□□ -0.33
Ccm2-201ENSMUST00000000388 Krtap3-1A2A591 98 aa12.99□□□□□ -0.33
Ccm2-201ENSMUST00000000388 Krtap1-3A2A588 173 aa12.97□□□□□ -0.33
Ccm2-201ENSMUST00000000388 Sec61gP60060 68 aa12.97□□□□□ -0.33
Ccm2-201ENSMUST00000000388 Gm10382Q3V0T5 144 aa12.93□□□□□ -0.34
Ccm2-201ENSMUST00000000388 Gm17606F6ZL36 78 aa12.92□□□□□ -0.34
Ccm2-201ENSMUST00000000388 Krtap13-1Q8K198 168 aa12.81□□□□□ -0.36
Ccm2-201ENSMUST00000000388 ZanO88799 5376 aa12.78□□□□□ -0.36
Ccm2-201ENSMUST00000000388 Krtap16-3Q8C1I6 86 aa12.77□□□□□ -0.37
Ccm2-201ENSMUST00000000388 Gm20537G3UYK7 97 aa12.74□□□□□ -0.37
Ccm2-201ENSMUST00000000388 Ndufs5Q99LY9 106 aa12.71□□□□□ -0.37
Ccm2-201ENSMUST00000000388 Gm10318A0A1W2P728 225 aa12.69□□□□□ -0.38
Ccm2-201ENSMUST00000000388 Krtap19-1Q925H2 87 aa12.69□□□□□ -0.38
Ccm2-201ENSMUST00000000388 Gm9955Q8CEJ8 102 aa12.68□□□□□ -0.38
Ccm2-201ENSMUST00000000388 Krtap19-3Q925H6 87 aa12.68□□□□□ -0.38
Ccm2-201ENSMUST00000000388 LorP18165 486 aa12.64□□□□□ -0.39
Ccm2-201ENSMUST00000000388 Krtap1-5A2A590 122 aa12.61□□□□□ -0.39
Ccm2-201ENSMUST00000000388 Fat4Q2PZL6 4981 aa12.59□□□□□ -0.39
Ccm2-201ENSMUST00000000388 Fam229aB2KGE5 128 aa12.49□□□□□ -0.41
Ccm2-201ENSMUST00000000388 Rnf213E9Q555 5152 aaKnown RBP12.44□□□□□ -0.42
Ccm2-201ENSMUST00000000388 Pla2g10Q9QXX3 151 aa12.41□□□□□ -0.42
Ccm2-201ENSMUST00000000388 Gm19402J3QJV4 266 aa12.4□□□□□ -0.42
Ccm2-201ENSMUST00000000388 BC029722A0A0N4SW31 51 aa12.37□□□□□ -0.43
Ccm2-201ENSMUST00000000388 1700042G07RikB1AUF7 90 aa12.36□□□□□ -0.43
Ccm2-201ENSMUST00000000388 Gm3880A0A1B0GSB3 72 aa12.35□□□□□ -0.43
Ccm2-201ENSMUST00000000388 Krtap1-4Q3V2D6 188 aa12.26□□□□□ -0.45
Ccm2-201ENSMUST00000000388 Gm10061D3Z714 54 aa12.04□□□□□ -0.48
Ccm2-201ENSMUST00000000388 B930094E09RikQ8C4T2 136 aa12□□□□□ -0.49
Ccm2-201ENSMUST00000000388 Gm19426M0QWC7 77 aa11.98□□□□□ -0.49
Ccm2-201ENSMUST00000000388 Gm17402F6Z0L5 76 aa11.96□□□□□ -0.49
Ccm2-201ENSMUST00000000388 SspoQ8CG65 4998 aa11.93□□□□□ -0.5
Ccm2-201ENSMUST00000000388 Sprr2a3Q4KL71 83 aa11.78□□□□□ -0.52
Ccm2-201ENSMUST00000000388 Sprr2a1Q9CQK8 83 aa11.78□□□□□ -0.52
Ccm2-201ENSMUST00000000388 Romo1P60603 79 aa11.77□□□□□ -0.53
Ccm2-201ENSMUST00000000388 Gm12216A0A1W2P827 62 aa11.76□□□□□ -0.53
Ccm2-201ENSMUST00000000388 Spink7Q6IE32 76 aa11.72□□□□□ -0.53
Ccm2-201ENSMUST00000000388 CriptO70333 101 aa11.67□□□□□ -0.54
Ccm2-201ENSMUST00000000388 Gm11569B1AQB1 180 aa11.66□□□□□ -0.54
Ccm2-201ENSMUST00000000388 Gm21887J3QQ04 176 aa11.59□□□□□ -0.55
Ccm2-201ENSMUST00000000388 Lce1jD3YUU5 139 aa11.51□□□□□ -0.57
Ccm2-201ENSMUST00000000388 Krtap12-1Q9Z287 130 aa11.44□□□□□ -0.58
Ccm2-201ENSMUST00000000388 Krtap17-1A2A5X6 109 aa11.38□□□□□ -0.59
Ccm2-201ENSMUST00000000388 Krtap19-2Q925I0 141 aa11.35□□□□□ -0.59
Ccm2-201ENSMUST00000000388 Krtap9-5A2A5X3 358 aa11.33□□□□□ -0.6
Ccm2-201ENSMUST00000000388 Krtap19-9aF8WH65 55 aa11.32□□□□□ -0.6
Ccm2-201ENSMUST00000000388 Krtap4-2B1AQ85 167 aa11.15□□□□□ -0.63
Ccm2-201ENSMUST00000000388 Prm2P07978 107 aa11.11□□□□□ -0.63
Ccm2-201ENSMUST00000000388 Gm11562A0PK51 136 aa11.06□□□□□ -0.64
Ccm2-201ENSMUST00000000388 Gm19668J3QMD1 248 aa11.05□□□□□ -0.64
Ccm2-201ENSMUST00000000388 Lce1gQ9D195 139 aa11.04□□□□□ -0.64
Ccm2-201ENSMUST00000000388 Muc5bE9Q5I3 4800 aa11.04□□□□□ -0.64
Ccm2-201ENSMUST00000000388 Camk2n1Q6QWF9 78 aa10.96□□□□□ -0.65
Ccm2-201ENSMUST00000000388 Krtap7-1Q9D3I6 87 aa10.85□□□□□ -0.67
Ccm2-201ENSMUST00000000388 Gm11555B1AQ89 175 aa10.85□□□□□ -0.67
Ccm2-201ENSMUST00000000388 Lce1iQ9D6P5 149 aa10.83□□□□□ -0.68
Ccm2-201ENSMUST00000000388 Gm6358A0A087WPH4 74 aa10.81□□□□□ -0.68
Ccm2-201ENSMUST00000000388 Syne2Q6ZWQ0 6874 aaKnown RBP10.73□□□□□ -0.69
Ccm2-201ENSMUST00000000388 Krtap4-6Q3V4B7 195 aa10.71□□□□□ -0.69
Ccm2-201ENSMUST00000000388 Lce1a2Q9D1K4 149 aa10.71□□□□□ -0.69
Ccm2-201ENSMUST00000000388 Mdn1A2ANY6 5589 aaKnown RBP10.69□□□□□ -0.7
Ccm2-201ENSMUST00000000388 Gm11596B1AQB0 205 aa10.68□□□□□ -0.7
Ccm2-201ENSMUST00000000388 Gm40193A0A1B0GT39 78 aa10.63□□□□□ -0.71
Ccm2-201ENSMUST00000000388 Krtap8-1O08633 61 aa10.51□□□□□ -0.73
Ccm2-201ENSMUST00000000388 Krtap4-1Q3UUY3 169 aa10.51□□□□□ -0.73
Ccm2-201ENSMUST00000000388 Mp68P56379 58 aa10.42□□□□□ -0.74
Ccm2-201ENSMUST00000000388 Mt2P02798 61 aa10.37□□□□□ -0.75
Ccm2-201ENSMUST00000000388 Krtap19-9bQ99NG9 58 aa10.36□□□□□ -0.75
Ccm2-201ENSMUST00000000388 Gm11564A2A4L9 201 aa10.23□□□□□ -0.77
Ccm2-201ENSMUST00000000388 Gm11563B1AQ90 168 aa10.23□□□□□ -0.77
Ccm2-201ENSMUST00000000388 Gm11595B1AQA7 289 aa10.23□□□□□ -0.77
Ccm2-201ENSMUST00000000388 Krtap4-8B1AQA8 209 aa10.23□□□□□ -0.77
Ccm2-201ENSMUST00000000388 Tnp1P10856 55 aa10.08□□□□□ -0.8
Ccm2-201ENSMUST00000000388 Krtap4-9B1AQA9 244 aa9.94□□□□□ -0.82
Ccm2-201ENSMUST00000000388 Krtap9-3Q3V2C1 136 aa9.91□□□□□ -0.82
Ccm2-201ENSMUST00000000388 Mt4P47945 62 aa9.87□□□□□ -0.83
Ccm2-201ENSMUST00000000388 Krtap22-2J3QNX6 67 aa9.83□□□□□ -0.84
Ccm2-201ENSMUST00000000388 Gm20538F6Z9R1 75 aa9.82□□□□□ -0.84
Ccm2-201ENSMUST00000000388 Lce1hQ9D6R3 140 aa9.82□□□□□ -0.84
Ccm2-201ENSMUST00000000388 Fsip2A2ARZ3 6995 aa9.75□□□□□ -0.85
Ccm2-201ENSMUST00000000388 2310046K23RikA0A0A6YVW6 87 aa9.68□□□□□ -0.86
Ccm2-201ENSMUST00000000388 Krtap4-13Q9D7P3 165 aa9.59□□□□□ -0.87
Ccm2-201ENSMUST00000000388 Lce1bQ9D149 137 aa9.56□□□□□ -0.88
Ccm2-201ENSMUST00000000388 Ndufaf8A2AMZ4 74 aa9.48□□□□□ -0.89
Ccm2-201ENSMUST00000000388 Gm38119A0A0A6YX29 146 aa9.44□□□□□ -0.9
Ccm2-201ENSMUST00000000388 Sprr2kO70562 68 aa9.36□□□□□ -0.91
Ccm2-201ENSMUST00000000388 2300003K06RikA2A4M0 262 aa9.31□□□□□ -0.92
Ccm2-201ENSMUST00000000388 Krtap6-3A0A087WQL6 57 aa9.28□□□□□ -0.92
Ccm2-201ENSMUST00000000388 Krtap4-7Q9D732 168 aa9.13□□□□□ -0.95
Ccm2-201ENSMUST00000000388 Lce1lQ9D1G7 135 aa9.1□□□□□ -0.95
Ccm2-201ENSMUST00000000388 Gm10272F7CZ33 110 aa9.02□□□□□ -0.96
Ccm2-201ENSMUST00000000388 Lce1dQ9D731 133 aa8.75□□□□□ -1.01
Ccm2-201ENSMUST00000000388 Gm11938Q9D3H4 131 aa8.72□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms