RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 GNT1Q12096 491 aa2.71□□□□□ -1.98
snR43snR43 RTK1Q12100 620 aaPredicted RBP2.71□□□□□ -1.98
snR43snR43 GAL4P04386 881 aa2.7□□□□□ -1.98
snR43snR43 RRT12P25381 491 aa2.7□□□□□ -1.98
snR43snR43 EFB1P32471 206 aaKnown RBP2.7□□□□□ -1.98
snR43snR43 WBP1P33767 430 aaKnown RBP2.7□□□□□ -1.98
snR43snR43 ABZ1P37254 787 aaPredicted RBP2.7□□□□□ -1.98
snR43snR43 NOP4P37838 685 aaKnown RBP2.7□□□□□ -1.98
snR43snR43 YMC2P38087 329 aa2.7□□□□□ -1.98
snR43snR43 CCZ1P38273 704 aa2.7□□□□□ -1.98
snR43snR43 SAK1P38990 1142 aa2.7□□□□□ -1.98
snR43snR43 ERV46P39727 415 aa2.7□□□□□ -1.98
snR43snR43 EXO1P39875 702 aa2.7□□□□□ -1.98
snR43snR43 ASG1P40467 964 aa2.7□□□□□ -1.98
snR43snR43 YPS6P40583 537 aa2.7□□□□□ -1.98
snR43snR43 UFE1P41834 346 aa2.7□□□□□ -1.98
snR43snR43 DUG1P43616 481 aaKnown RBP2.7□□□□□ -1.98
snR43snR43 COQ5P49017 307 aa2.7□□□□□ -1.98
snR43snR43 RSC1P53236 928 aa2.7□□□□□ -1.98
snR43snR43 PIR3Q03180 325 aa2.7□□□□□ -1.98
snR43snR43 YMR206WQ03695 313 aa2.7□□□□□ -1.98
snR43snR43 PPM1Q04081 328 aa2.7□□□□□ -1.98
snR43snR43 HRD3Q05787 833 aa2.7□□□□□ -1.98
snR43snR43 YSH1Q06224 779 aaPredicted RBP2.7□□□□□ -1.98
snR43snR43 MLH2Q07980 695 aa2.7□□□□□ -1.98
snR43snR43 DDC1Q08949 612 aa2.7□□□□□ -1.98
snR43snR43 YDL177CQ12257 170 aa2.7□□□□□ -1.98
snR43snR43 YIL046W-AQ3E7Z4 54 aa2.7□□□□□ -1.98
snR43snR43 COX3P00420 269 aa2.69□□□□□ -1.98
snR43snR43 RIP1P08067 215 aa2.69□□□□□ -1.98
snR43snR43 SPS1P08458 490 aa2.69□□□□□ -1.98
snR43snR43 ERG6P25087 383 aaKnown RBP2.69□□□□□ -1.98
snR43snR43 AGP1P25376 633 aa2.69□□□□□ -1.98
snR43snR43 LRE1P25579 583 aaKnown RBP2.69□□□□□ -1.98
snR43snR43 YKL151CP36059 337 aa2.69□□□□□ -1.98
snR43snR43 BAP2P38084 609 aa2.69□□□□□ -1.98
snR43snR43 RFT1P38206 574 aaPredicted RBP2.69□□□□□ -1.98
snR43snR43 YBR053CP38235 358 aa2.69□□□□□ -1.98
snR43snR43 TAT2P38967 592 aa2.69□□□□□ -1.98
snR43snR43 TIF34P40217 347 aaKnown RBP2.69□□□□□ -1.98
snR43snR43 RSM25P40496 264 aa2.69□□□□□ -1.98
snR43snR43 AIM23P47015 356 aa2.69□□□□□ -1.98
snR43snR43 TIM54P47045 478 aa2.69□□□□□ -1.98
snR43snR43 CPR7P47103 393 aa2.69□□□□□ -1.98
snR43snR43 MRX6P48564 524 aa2.69□□□□□ -1.98
snR43snR43 NPY1P53164 384 aa2.69□□□□□ -1.98
snR43snR43 NRM1P53718 249 aa2.69□□□□□ -1.98
snR43snR43 ROT1Q03691 256 aa2.69□□□□□ -1.98
snR43snR43 AIM32Q04689 311 aa2.69□□□□□ -1.98
snR43snR43 HRQ1Q05549 1077 aa2.69□□□□□ -1.98
snR43snR43 NDD1Q08887 554 aa2.69□□□□□ -1.98
snR43snR43 SAM4Q08985 325 aaKnown RBP2.69□□□□□ -1.98
snR43snR43 SLX4Q12098 748 aa2.69□□□□□ -1.98
snR43snR43 SVS1Q12254 260 aa2.69□□□□□ -1.98
snR43snR43 DFG16Q99234 619 aa2.69□□□□□ -1.98
snR43snR43 RPL22AP05749 121 aaKnown RBP2.68□□□□□ -1.98
snR43snR43 RAD3P06839 778 aa2.68□□□□□ -1.98
snR43snR43 CMP2P14747 604 aa2.68□□□□□ -1.98
snR43snR43 SEC63P14906 663 aa2.68□□□□□ -1.98
snR43snR43 STE4P18851 423 aa2.68□□□□□ -1.98
snR43snR43 ARF2P19146 181 aaKnown RBP2.68□□□□□ -1.98
snR43snR43 PRP9P19736 530 aaKnown RBP2.68□□□□□ -1.98
snR43snR43 RNQ1P25367 405 aa2.68□□□□□ -1.98
snR43snR43 APL1P27351 700 aa2.68□□□□□ -1.98
snR43snR43 SBA1P28707 216 aaKnown RBP2.68□□□□□ -1.98
snR43snR43 TYE7P33122 291 aaPredicted RBP2.68□□□□□ -1.98
snR43snR43 XRS2P33301 854 aa2.68□□□□□ -1.98
snR43snR43 PRX1P34227 261 aaKnown RBP2.68□□□□□ -1.98
snR43snR43 PPE1P38796 400 aa2.68□□□□□ -1.98
snR43snR43 CTM1P38818 585 aa2.68□□□□□ -1.98
snR43snR43 ALR2P43553 858 aa2.68□□□□□ -1.98
snR43snR43 MNN10P50108 393 aaKnown RBP2.68□□□□□ -1.98
snR43snR43 HFM1P51979 1187 aa2.68□□□□□ -1.98
snR43snR43 MND1P53102 219 aa2.68□□□□□ -1.98
snR43snR43 PEX14P53112 341 aa2.68□□□□□ -1.98
snR43snR43 YGR266WP53326 701 aa2.68□□□□□ -1.98
snR43snR43 SUN4P53616 420 aa2.68□□□□□ -1.98
snR43snR43 CSL4P53859 292 aaPredicted RBP2.68□□□□□ -1.98
snR43snR43 SWS2P53937 143 aa2.68□□□□□ -1.98
snR43snR43 YLR456WQ06199 204 aa2.68□□□□□ -1.98
snR43snR43 CSR1Q06705 408 aaKnown RBP2.68□□□□□ -1.98
snR43snR43 PSR2Q07949 397 aa2.68□□□□□ -1.98
snR43snR43 XYL2Q07993 356 aa2.68□□□□□ -1.98
snR43snR43 NBA1Q08229 501 aaKnown RBP2.68□□□□□ -1.98
snR43snR43 VTS1Q08831 523 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
snR43snR43 ACM1Q08981 209 aa2.68□□□□□ -1.98
snR43snR43 HMI1Q12039 706 aa2.68□□□□□ -1.98
snR43snR43 VPS54Q12071 889 aa2.68□□□□□ -1.98
snR43snR43 PER33Q12144 273 aa2.68□□□□□ -1.98
snR43snR43 YOL098CQ12496 1037 aa2.68□□□□□ -1.98
snR43snR43 ECM3Q99252 613 aa2.68□□□□□ -1.98
snR43snR43 AI5_BETAQ9ZZX0 354 aa2.68□□□□□ -1.98
snR43snR43 MEC1P38111 2368 aa2.67□□□□□ -1.98
snR43snR43 CYC1P00044 109 aaPredicted RBP2.67□□□□□ -1.98
snR43snR43 RPL1AP0CX43 217 aaKnown RBP2.67□□□□□ -1.98
snR43snR43 RPL1BP0CX44 217 aaKnown RBP2.67□□□□□ -1.98
snR43snR43 PYC1P11154 1178 aaKnown RBP2.67□□□□□ -1.98
snR43snR43 AEP2P22136 580 aa2.67□□□□□ -1.98
snR43snR43 GAS1P22146 559 aaKnown RBP2.67□□□□□ -1.98
snR43snR43 RDS1P25611 832 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms