RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	YCK2	P23292	546 aa	Known RBP	2.53	□□□□□ -2
VTC3	YPL019C	MIH1	P23748	554 aa		2.53	□□□□□ -2
VTC3	YPL019C	CDC15	P27636	974 aa		2.53	□□□□□ -2
VTC3	YPL019C	CBF2	P32504	956 aa		2.53	□□□□□ -2
VTC3	YPL019C	SPC29	P33419	253 aa		2.53	□□□□□ -2
VTC3	YPL019C	PRX1	P34227	261 aa	Known RBP	2.53	□□□□□ -2
VTC3	YPL019C	NNK1	P36003	928 aa		2.53	□□□□□ -2
VTC3	YPL019C	ECM13	P38195	257 aa		2.53	□□□□□ -2
VTC3	YPL019C	GIC1	P38785	314 aa		2.53	□□□□□ -2
VTC3	YPL019C	DUN1	P39009	513 aa		2.53	□□□□□ -2
VTC3	YPL019C	SDS3	P40505	327 aa		2.53	□□□□□ -2
VTC3	YPL019C	FLC3	P53121	802 aa		2.53	□□□□□ -2
VTC3	YPL019C	YGR283C	P53336	341 aa	Predicted RBP	2.53	□□□□□ -2
VTC3	YPL019C	RTN1	Q04947	295 aa	Known RBP	2.53	□□□□□ -2
VTC3	YPL019C	TLG2	Q08144	397 aa		2.53	□□□□□ -2
VTC3	YPL019C	CLP1	Q08685	445 aa	Predicted RBP	2.53	□□□□□ -2
VTC3	YPL019C	DDC1	Q08949	612 aa		2.53	□□□□□ -2
VTC3	YPL019C	AI3	P03877	415 aa		2.53	□□□□□ -2
VTC3	YPL019C	RAD3	P06839	778 aa		2.53	□□□□□ -2
VTC3	YPL019C	RPS4A	P0CX35	261 aa	Known RBP	2.53	□□□□□ -2
VTC3	YPL019C	RPS4B	P0CX36	261 aa	Known RBP	2.53	□□□□□ -2
VTC3	YPL019C	RDS1	P25611	832 aa		2.53	□□□□□ -2
VTC3	YPL019C	PCL2	P25693	308 aa		2.53	□□□□□ -2
VTC3	YPL019C	PRO1	P32264	428 aa		2.53	□□□□□ -2
VTC3	YPL019C	AAR2	P32357	355 aa	Predicted RBP	2.53	□□□□□ -2
VTC3	YPL019C	MTC2	P34246	357 aa		2.53	□□□□□ -2
VTC3	YPL019C	UTH1	P36135	365 aa		2.53	□□□□□ -2
VTC3	YPL019C	LEU5	P38702	357 aa		2.53	□□□□□ -2
VTC3	YPL019C	YER158C	P40095	573 aa		2.53	□□□□□ -2
VTC3	YPL019C	MGS1	P40151	587 aa		2.53	□□□□□ -2
VTC3	YPL019C	CDC1	P40986	491 aa		2.53	□□□□□ -2
VTC3	YPL019C	TOS3	P43637	560 aa		2.53	□□□□□ -2
VTC3	YPL019C	IML2	P47031	731 aa		2.53	□□□□□ -2
VTC3	YPL019C	PRY1	P47032	299 aa		2.53	□□□□□ -2
VTC3	YPL019C	COS5	P47187	383 aa		2.53	□□□□□ -2
VTC3	YPL019C	PYK2	P52489	506 aa	Known RBP	2.53	□□□□□ -2
VTC3	YPL019C	YGL036W	P53185	909 aa	Predicted RBP	2.53	□□□□□ -2
VTC3	YPL019C	GIR2	Q03768	265 aa	Predicted RBP	2.53	□□□□□ -2
VTC3	YPL019C	HEL2	Q05580	639 aa	Known RBP	2.53	□□□□□ -2
VTC3	YPL019C	XYL2	Q07993	356 aa		2.53	□□□□□ -2
VTC3	YPL019C	ACM1	Q08981	209 aa		2.53	□□□□□ -2
VTC3	YPL019C	RTK1	Q12100	620 aa	Predicted RBP	2.53	□□□□□ -2
VTC3	YPL019C	OM45	P16547	393 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	CDC42	P19073	191 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	SAT4	P25333	603 aa	Known RBP	2.52	□□□□□ -2.01
VTC3	YPL019C	SFP1	P32432	683 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	DOM34	P33309	386 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	YRO2	P38079	344 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	YMC2	P38087	329 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	CTM1	P38818	585 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	CPR7	P47103	393 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	HXT16	P47185	567 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	HOS3	Q02959	697 aa	Known RBP	2.52	□□□□□ -2.01
VTC3	YPL019C	TPP1	Q03796	238 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	VPS20	Q04272	221 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	HRD3	Q05787	833 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	ECM38	Q05902	660 aa	Predicted RBP	2.52	□□□□□ -2.01
VTC3	YPL019C	CSR1	Q06705	408 aa	Known RBP	2.52	□□□□□ -2.01
VTC3	YPL019C	MDM38	Q08179	573 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	YOR387C	Q08910	206 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	ENV7	Q12003	364 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	SLX4	Q12098	748 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	YLL054C	Q12244	843 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	SVS1	Q12254	260 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	RPL22A	P05749	121 aa	Known RBP	2.52	□□□□□ -2.01
VTC3	YPL019C	SFA1	P32771	386 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	MRPL40	P36534	297 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	UBP7	P40453	1071 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	MND1	P53102	219 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	RSC1	P53236	928 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	COP1	P53622	1201 aa	Known RBP	2.52	□□□□□ -2.01
VTC3	YPL019C	YMR206W	Q03695	313 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	YSH1	Q06224	779 aa	Predicted RBP	2.52	□□□□□ -2.01
VTC3	YPL019C	TDA6	Q06466	467 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	THI73	Q07904	523 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	TRE1	Q08919	783 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	YVC1	Q12324	675 aa		2.52	□□□□□ -2.01
VTC3	YPL019C	COX3	P00420	269 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	ARF2	P19146	181 aa	Known RBP	2.51	□□□□□ -2.01
VTC3	YPL019C	PMI40	P29952	429 aa	Known RBP	2.51	□□□□□ -2.01
VTC3	YPL019C	CDC11	P32458	415 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	RFT1	P38206	574 aa	Predicted RBP	2.51	□□□□□ -2.01
VTC3	YPL019C	YBR238C	P38330	731 aa	Known RBP	2.51	□□□□□ -2.01
VTC3	YPL019C	HSE1	P38753	452 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	SAK1	P38990	1142 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	EXO1	P39875	702 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	GPP1	P41277	250 aa	Known RBP	2.51	□□□□□ -2.01
VTC3	YPL019C	DUG1	P43616	481 aa	Known RBP	2.51	□□□□□ -2.01
VTC3	YPL019C	AIM23	P47015	356 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	YJR079W	P47126	109 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	COQ5	P49017	307 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	VEL1	P53058	206 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	TGL2	P54857	326 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	PIR3	Q03180	325 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	RPN8	Q08723	338 aa	Known RBP	2.51	□□□□□ -2.01
VTC3	YPL019C	YPL216W	Q08964	1102 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	CSF1	Q12150	2958 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	YDR215C	Q12240	137 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	LCB4	Q12246	624 aa		2.51	□□□□□ -2.01
VTC3	YPL019C	RIB2	Q12362	591 aa	Known RBP	2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 82.7 ms