RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT4	YOR259C	IES3	Q12345	250 aa		5.52	□□□□□ -1.53
RPT4	YOR259C	DBP10	Q12389	995 aa	Known RBP	5.52	□□□□□ -1.53
RPT4	YOR259C	SPE4	Q12455	300 aa		5.52	□□□□□ -1.53
RPT4	YOR259C	SEM1	O94742	89 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	RAD10	P06838	210 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	ILS1	P09436	1072 aa	Known RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	CDC24	P11433	854 aa	Predicted RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	ADE2	P21264	571 aa	Known RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	VPS34	P22543	875 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.51	□□□□□ -1.53	not detected
RPT4	YOR259C	DPB2	P24482	689 aa	Predicted RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	RAD14	P28519	371 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	YSC84	P32793	468 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	COT1	P32798	439 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	TIM23	P32897	222 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	RIB7	P33312	244 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.51	□□□□□ -1.53	not detected
RPT4	YOR259C	CUE2	P36075	443 aa	Known RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	ETR1	P38071	380 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	PCA1	P38360	1216 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	CBR1	P38626	284 aa	Known RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	MSR1	P38714	643 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	PMC1	P38929	1173 aa	Predicted RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	FRT2	P39734	528 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	EAF5	P39995	279 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	MAM33	P40513	266 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	GCV1	P48015	400 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	RBL2	P48606	106 aa	Known RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	MIG2	P53035	382 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	MRM2	P53123	320 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	RTT102	P53330	157 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	ADI1	Q03677	179 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	PRM6	Q04705	352 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	YCS4	Q06156	1176 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	YET3	Q07451	203 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	YPR202W	Q08993	238 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	MDM20	Q12387	796 aa	Known RBP	5.51	□□□□□ -1.53
RPT4	YOR259C	LAA1	P39526	2014 aa		5.51	□□□□□ -1.53
RPT4	YOR259C	TUB3	P09734	445 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	MPH2	P0CD99	609 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	MAS2	P11914	482 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	SEC63	P14906	663 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	ADY2	P25613	283 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	CSG2	P35206	410 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	TSC10	P38342	320 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	DIA4	P38705	446 aa	Predicted RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	YJL206C	P39529	758 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	STL1	P39932	569 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	FTR1	P40088	404 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	KHA1	P40309	873 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	RLP7	P40693	322 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	YJL107C	P42947	387 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	FAR3	P46671	204 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	CPR7	P47103	393 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	VMA10	P48836	114 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	PSP2	P50109	593 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	TEL2	P53038	688 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	UTP8	P53276	713 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	DCP2	P53550	970 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	DUS1	P53759	423 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	SND1	Q04007	877 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	BUD22	Q04347	519 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	ADE13	Q05911	482 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	NDL1	Q06568	189 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	YOR059C	Q08448	450 aa	Known RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	IES4	Q08561	116 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	ICL2	Q12031	575 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	VIK1	Q12045	647 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	FAP7	Q12055	197 aa	Predicted RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	MSH5	Q12175	901 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	YDR018C	Q12185	396 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	NOT5	Q12514	560 aa	Predicted RBP	5.5	□□□□□ -1.53
RPT4	YOR259C	ADF1	Q2V2Q1	113 aa		5.5	□□□□□ -1.53
RPT4	YOR259C	TEF1	P02994	458 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	MSD1	P15179	658 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	RNR1	P21524	888 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	GFD2	P25370	566 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	URA7	P28274	579 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	RME1	P32338	300 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	ABD1	P32783	436 aa	Predicted RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	SMY2	P32909	740 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	SPC42	P36094	363 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	YKR015C	P36111	568 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	SLM4	P38247	162 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	FES1	P38260	290 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	SAF1	P38352	637 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	KSP1	P38691	1029 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	YDR089W	P38966	869 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	SAW1	P39735	261 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	TMN3	P40071	706 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	PHO86	P46956	311 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	ALY2	P47029	1046 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	BRE5	P53741	515 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	YNL146W	P53906	100 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	TEP1	P53916	434 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	TMA20	P89886	181 aa	Predicted RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	YKR005C	Q02203	525 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	ULP1	Q02724	621 aa		5.49	□□□□□ -1.53
RPT4	YOR259C	SXM1	Q04175	944 aa	Known RBP	5.49	□□□□□ -1.53
RPT4	YOR259C	CIR2	Q08822	631 aa		5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms