RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI3	YNL197C	YSP3	P25036	478 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	YMC2	P38087	329 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	CBR1	P38626	284 aa	Known RBP	3.78	□□□□□ -1.8
WHI3	YNL197C	BDH2	P39713	417 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	SRB7	P47822	140 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	CTR1	P49573	406 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	MRI1	Q06489	411 aa	Known RBP	3.78	□□□□□ -1.8
WHI3	YNL197C	TSR2	Q06672	205 aa	Known RBP	3.78	□□□□□ -1.8
WHI3	YNL197C	ENT4	Q07872	247 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	CIR2	Q08822	631 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	CET1	O13297	549 aa	Predicted RBP	3.78	□□□□□ -1.8
WHI3	YNL197C	YLR302C	O13544	120 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	LOT5	P34234	306 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	GIP4	P39732	760 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	THI6	P41835	540 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	IRC6	P43615	237 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	ARC1	P46672	376 aa	Known RBP	3.78	□□□□□ -1.8
WHI3	YNL197C	MSE1	P48525	536 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	ASE1	P50275	885 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	YGR079W	P53249	370 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	PIL1	P53252	339 aa	Known RBP	3.78	□□□□□ -1.8
WHI3	YNL197C	INN1	P53901	409 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	TDA9	Q04545	1251 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	PCL8	Q08966	492 aa		3.78	□□□□□ -1.8
WHI3	YNL197C	CHO2	P05374	869 aa	Known RBP	3.77	□□□□□ -1.81
WHI3	YNL197C	SUI3	P09064	285 aa	Known RBP	3.77	□□□□□ -1.81
WHI3	YNL197C	KAR3	P17119	729 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	RNR3	P21672	869 aa	Known RBP	3.77	□□□□□ -1.81
WHI3	YNL197C	PDE1	P22434	369 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	SAC6	P32599	642 aa	Known RBP	3.77	□□□□□ -1.81
WHI3	YNL197C	MFT1	P33441	392 aa	Known RBP	3.77	□□□□□ -1.81
WHI3	YNL197C	NUP120	P35729	1037 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	GLG1	P36143	616 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	ERC1	P38767	581 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	SKP2	P42843	763 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	NPA3	P47122	385 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	STB4	P50104	949 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	UBP16	Q02863	499 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	TGS1	Q12052	315 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	PUS9	Q12069	462 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	SWT1	Q12104	458 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	LCB4	Q12246	624 aa		3.77	□□□□□ -1.81
WHI3	YNL197C	SGF29	P25554	259 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	RFA2	P26754	273 aa	Known RBP	3.76	□□□□□ -1.81
WHI3	YNL197C	SWC3	P31376	625 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	GDA1	P32621	518 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	RKM3	P38222	552 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	TDP1	P38319	544 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	YBR225W	P38321	900 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	SDS3	P40505	327 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	RMD8	P43620	662 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	AAD10	P47182	288 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	YGL117W	P53133	265 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	DUO1	P53168	247 aa	Known RBP	3.76	□□□□□ -1.81
WHI3	YNL197C	NGL2	Q03264	515 aa	Known RBP	3.76	□□□□□ -1.81
WHI3	YNL197C	TAF11	Q04226	346 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	ATG23	Q06671	453 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	ACF2	Q12168	779 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	FOB1	O13329	566 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	MRP7	P12687	371 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	PCT1	P13259	424 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	SPO16	P17122	198 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	GCD7	P32502	381 aa	Predicted RBP	3.76	□□□□□ -1.81
WHI3	YNL197C	NPR2	P39923	615 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	PFK26	P40433	827 aa	Known RBP	3.76	□□□□□ -1.81
WHI3	YNL197C	RBG2	P53295	368 aa	Known RBP	3.76	□□□□□ -1.81
WHI3	YNL197C	MUB1	Q03162	620 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	NGL3	Q03210	505 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	RAD30	Q04049	632 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	YDL073W	Q07454	984 aa		3.76	□□□□□ -1.81
WHI3	YNL197C	CPA2	P03965	1118 aa	Known RBP	3.75	□□□□□ -1.81
WHI3	YNL197C	CDC24	P11433	854 aa	Predicted RBP	3.75	□□□□□ -1.81
WHI3	YNL197C	CMK1	P27466	446 aa	Known RBP	3.75	□□□□□ -1.81
WHI3	YNL197C	HES1	P35843	434 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	ALY1	P36117	915 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	TPA1	P40032	644 aa	Known RBP	3.75	□□□□□ -1.81
WHI3	YNL197C	MAM1	P40065	302 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	SLZ1	P40167	298 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	YIL161W	P40449	235 aa	Known RBP	3.75	□□□□□ -1.81
WHI3	YNL197C	UBP7	P40453	1071 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	MSY1	P48527	492 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	COQ6	P53318	479 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	RAD33	Q04231	177 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	GPN2	Q08726	347 aa	Predicted RBP	3.75	□□□□□ -1.81
WHI3	YNL197C	NBP2	Q12163	236 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	SKM1	Q12469	655 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	ZPS1	Q12512	249 aa		3.75	□□□□□ -1.81
WHI3	YNL197C	WHI2	P12611	486 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	EMP70	P32802	667 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	HRD3	Q05787	833 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	RIX7	Q07844	837 aa	Known RBP	3.74	□□□□□ -1.81
WHI3	YNL197C	CRT10	Q08226	957 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	NMD4	Q12129	218 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	PGA3	Q12746	312 aa	Known RBP	3.74	□□□□□ -1.81
WHI3	YNL197C	YOR111W	Q99210	232 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	YOR019W	Q99248	730 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	COX1	P00401	534 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	YCK1	P23291	538 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	SRB5	P32585	307 aa		3.74	□□□□□ -1.81
WHI3	YNL197C	PIH1	P38768	344 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 105 ms