RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W ADY3Q07732 790 aa3.89□□□□□ -1.79
ECM16YMR128W SNX3Q08826 162 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W PCL8Q08966 492 aa3.89□□□□□ -1.79
ECM16YMR128W GET4Q12125 312 aa3.89□□□□□ -1.79
ECM16YMR128W SPE4Q12455 300 aa3.89□□□□□ -1.79
ECM16YMR128W TUB3P09734 445 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W SAM1P10659 382 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W BCK2P33306 851 aa3.89□□□□□ -1.79
ECM16YMR128W PGM1P33401 570 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W MSR1P38714 643 aa3.89□□□□□ -1.79
ECM16YMR128W AIM46P38885 310 aa3.89□□□□□ -1.79
ECM16YMR128W FTR1P40088 404 aa3.89□□□□□ -1.79
ECM16YMR128W PEP8P40335 379 aa3.89□□□□□ -1.79
ECM16YMR128W HPM1P40481 377 aa3.89□□□□□ -1.79
ECM16YMR128W ORC5P50874 479 aa3.89□□□□□ -1.79
ECM16YMR128W MIG2P53035 382 aa3.89□□□□□ -1.79
ECM16YMR128W ROD1Q02805 837 aa3.89□□□□□ -1.79
ECM16YMR128W YMR209CQ03648 457 aa3.89□□□□□ -1.79
ECM16YMR128W SMP3Q04174 516 aa3.89□□□□□ -1.79
ECM16YMR128W FMP25Q08023 583 aa3.89□□□□□ -1.79
ECM16YMR128W TMA46Q12000 345 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W IES3Q12345 250 aa3.89□□□□□ -1.79
ECM16YMR128W ECM3Q99252 613 aa3.89□□□□□ -1.79
ECM16YMR128W LAA1P39526 2014 aa3.89□□□□□ -1.79
ECM16YMR128W PDC5P16467 563 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W URA4P20051 364 aa3.89□□□□□ -1.79
ECM16YMR128W DPB2P24482 689 aaPredicted RBP3.89□□□□□ -1.79
ECM16YMR128W YCR015CP25616 317 aa3.89□□□□□ -1.79
ECM16YMR128W PHO88P38264 188 aaPredicted RBP3.89□□□□□ -1.79
ECM16YMR128W FIS1P40515 155 aa3.89□□□□□ -1.79
ECM16YMR128W SBE2P42223 864 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W SAE2P46946 345 aa3.89□□□□□ -1.79
ECM16YMR128W MRM2P53123 320 aa3.89□□□□□ -1.79
ECM16YMR128W TPO2P53283 614 aa3.89□□□□□ -1.79
ECM16YMR128W SKI8Q02793 397 aaPredicted RBP3.89□□□□□ -1.79
ECM16YMR128W NAN1Q02931 896 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W RSM24Q03976 319 aa3.89□□□□□ -1.79
ECM16YMR128W IVY1Q04934 453 aa3.89□□□□□ -1.79
ECM16YMR128W CRD1Q07560 283 aa3.89□□□□□ -1.79
ECM16YMR128W NOT5Q12514 560 aaPredicted RBP3.89□□□□□ -1.79
ECM16YMR128W AI5_BETAQ9ZZX0 354 aa3.89□□□□□ -1.79
ECM16YMR128W VMA2P16140 517 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W DBP5P20449 482 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W AGP1P25376 633 aa3.88□□□□□ -1.79
ECM16YMR128W URA7P28274 579 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W CCR4P31384 837 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W PIN4P34217 668 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
ECM16YMR128W CST26P38226 397 aa3.88□□□□□ -1.79
ECM16YMR128W KEL1P38853 1164 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W IRR1P40541 1150 aa3.88□□□□□ -1.79
ECM16YMR128W SET2P46995 733 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W PRO2P54885 456 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W PRM6Q04705 352 aa3.88□□□□□ -1.79
ECM16YMR128W REH1Q06709 432 aa3.88□□□□□ -1.79
ECM16YMR128W ENT4Q07872 247 aa3.88□□□□□ -1.79
ECM16YMR128W YLL054CQ12244 843 aa3.88□□□□□ -1.79
ECM16YMR128W SUI3P09064 285 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W PMS1P14242 873 aa3.88□□□□□ -1.79
ECM16YMR128W TRX1P22217 103 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
ECM16YMR128W VPH2P32341 215 aa3.88□□□□□ -1.79
ECM16YMR128W SRL3P36167 246 aa3.88□□□□□ -1.79
ECM16YMR128W QNS1P38795 714 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W PEX28P38848 579 aa3.88□□□□□ -1.79
ECM16YMR128W YJL206CP39529 758 aa3.88□□□□□ -1.79
ECM16YMR128W MRPS18P42847 217 aa3.88□□□□□ -1.79
ECM16YMR128W ERO1Q03103 563 aa3.88□□□□□ -1.79
ECM16YMR128W TRS130Q03660 1102 aa3.88□□□□□ -1.79
ECM16YMR128W HMO1Q03973 246 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W YLR225CQ05948 407 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W VHS3Q08438 674 aa3.88□□□□□ -1.79
ECM16YMR128W UBR2Q07963 1872 aa3.88□□□□□ -1.79
ECM16YMR128W FUS1P11710 512 aa3.88□□□□□ -1.79
ECM16YMR128W NAT1P12945 854 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W EST1P17214 699 aaPredicted RBP3.88□□□□□ -1.79
ECM16YMR128W SBA1P28707 216 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W EFT1P32324 842 aaKnown RBP3.88□□□□□ -1.79
ECM16YMR128W RIM2P38127 377 aa3.88□□□□□ -1.79
ECM16YMR128W APN2P38207 520 aa3.88□□□□□ -1.79
ECM16YMR128W PFF1P38244 976 aa3.88□□□□□ -1.79
ECM16YMR128W APE4P38821 490 aa3.88□□□□□ -1.79
ECM16YMR128W FMP32P43557 207 aa3.88□□□□□ -1.79
ECM16YMR128W KTR5P53966 522 aaPredicted RBP3.88□□□□□ -1.79
ECM16YMR128W NDL1Q06568 189 aa3.88□□□□□ -1.79
ECM16YMR128W COR1P07256 457 aa3.87□□□□□ -1.79
ECM16YMR128W MSB1P21339 1137 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W MIH1P23748 554 aa3.87□□□□□ -1.79
ECM16YMR128W RME1P32338 300 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W PHO89P38361 574 aa3.87□□□□□ -1.79
ECM16YMR128W OSH7P38755 437 aa3.87□□□□□ -1.79
ECM16YMR128W PEX18P38855 283 aa3.87□□□□□ -1.79
ECM16YMR128W YRB1P41920 201 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W FAR3P46671 204 aa3.87□□□□□ -1.79
ECM16YMR128W YNL247WP53852 767 aaKnown RBP3.87□□□□□ -1.79
ECM16YMR128W YKR005CQ02203 525 aa3.87□□□□□ -1.79
ECM16YMR128W ACK1Q07622 623 aaPredicted RBP3.87□□□□□ -1.79
ECM16YMR128W MCH5Q08777 521 aa3.87□□□□□ -1.79
ECM16YMR128W YDL176WQ12027 708 aa3.87□□□□□ -1.79
ECM16YMR128W YVC1Q12324 675 aa3.87□□□□□ -1.79
ECM16YMR128W GPM3Q12326 303 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms